FFCP PHASE1:Mm9::chr19:25684746..25684751,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=240590|HGNC=|UniProt=Q80WT2|association_with_transcript=-275bp_to_ENSMUST00000048935,NM_177360,uc008hbk.2_5end|description=CAGE_peak_2_at_Dmrt3_5end|id=chr19:25684746..25684751,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,2.43e-30,2;CL:0002604,2.43e-30,2;CL:0000128,7.63e-11,6;CL:0000126,7.63e-11,6;CL:0000127,7.63e-11,6;CL:0002453,2.25e-08,8;CL:0000333,6.98e-07,10;CL:0000095,6.98e-07,10;CL:0000243,6.98e-07,10;CL:0000123,6.98e-07,10;CL:0000125,6.98e-07,10;CL:0000030,6.98e-07,10;CL:0000339,6.98e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001954!9.56e-09!7;UBERON:0003022!9.56e-09!7;UBERON:0002421!9.56e-09!7;UBERON:0000349!9.56e-09!7;UBERON:0002600!9.56e-09!7|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.70e-19,7;UBERON:0003022,1.70e-19,7;UBERON:0002421,1.70e-19,7;UBERON:0000349,1.70e-19,7;UBERON:0002600,1.70e-19,7;UBERON:0002619,1.76e-08,17;UBERON:0000956,5.44e-07,21;UBERON:0001869,5.44e-07,21;UBERON:0000203,5.44e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,1.98581902401771,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,3.95435128922049,1.94429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0.571301968807607,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.01343946190039,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.477937595905104,0.445597348164788,0.566153061577665,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0.524296722128554,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p2@Dmrt3}} | ||
|EntrezGene=240590 | |||
|HGNC= | |||
|UniProt=Q80WT2 | |||
|association_with_transcript=-275bp_to_ENSMUST00000048935,NM_177360,uc008hbk.2_5end | |||
|description=CAGE_peak_2_at_Dmrt3_5end | |||
|id=chr19:25684746..25684751,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.43e-30,2;CL:0002604,2.43e-30,2;CL:0000128,7.63e-11,6;CL:0000126,7.63e-11,6;CL:0000127,7.63e-11,6;CL:0002453,2.25e-08,8;CL:0000333,6.98e-07,10;CL:0000095,6.98e-07,10;CL:0000243,6.98e-07,10;CL:0000123,6.98e-07,10;CL:0000125,6.98e-07,10;CL:0000030,6.98e-07,10;CL:0000339,6.98e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001954!9.56e-09!7;UBERON:0003022!9.56e-09!7;UBERON:0002421!9.56e-09!7;UBERON:0000349!9.56e-09!7;UBERON:0002600!9.56e-09!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.70e-19,7;UBERON:0003022,1.70e-19,7;UBERON:0002421,1.70e-19,7;UBERON:0000349,1.70e-19,7;UBERON:0002600,1.70e-19,7;UBERON:0002619,1.76e-08,17;UBERON:0000956,5.44e-07,21;UBERON:0001869,5.44e-07,21;UBERON:0000203,5.44e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,1.98581902401771,1.56719873483361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,3.95435128922049,1.94429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0.571301968807607,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.01343946190039,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.477937595905104,0.445597348164788,0.566153061577665,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0.13020438484395,0.524296722128554,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Dmrt3 | |||
}} |
Revision as of 17:16, 13 September 2013
Short description: | p2@Dmrt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dmrt3_5end |
Coexpression cluster: | NA |
Association with transcript: | -275bp_to_ENSMUST00000048935, NM_177360, uc008hbk.2_5end |
EntrezGene: | Dmrt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.43e-30 | 2 |
astrocyte of the hippocampus | 2.43e-30 | 2 |
oligodendrocyte | 7.63e-11 | 6 |
macroglial cell | 7.63e-11 | 6 |
astrocyte | 7.63e-11 | 6 |
oligodendrocyte precursor cell | 2.25e-08 | 8 |
migratory neural crest cell | 6.98e-07 | 10 |
neuron associated cell | 6.98e-07 | 10 |
glial cell (sensu Vertebrata) | 6.98e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 6.98e-07 | 10 |
glial cell | 6.98e-07 | 10 |
glioblast | 6.98e-07 | 10 |
glioblast (sensu Vertebrata) | 6.98e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.70e-19 | 7 |
lobe parts of cerebral cortex | 1.70e-19 | 7 |
hippocampal formation | 1.70e-19 | 7 |
limbic system | 1.70e-19 | 7 |
limbic lobe | 1.70e-19 | 7 |
regional part of cerebral cortex | 1.76e-08 | 17 |
cerebral cortex | 5.44e-07 | 21 |
cerebral hemisphere | 5.44e-07 | 21 |
pallium | 5.44e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.