FFCP PHASE1:Mm9::chr9:119893782..119893802,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=215418|HGNC=|MCL_coexpression_id=2879|UniProt=P59054|association_with_transcript=-6bp_to_NM_153287,uc009sbv.1_5end|description=CAGE_peak_1_at_Csrnp1_5end|id=chr9:119893782..119893802,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,8.32e-11,3;CL:0000351,8.32e-11,3;CL:0002494,7.24e-10,3;CL:0000737,7.24e-10,3;CL:0000746,7.24e-10,3;CL:0000513,7.24e-10,3;CL:0000217,9.31e-08,2;CL:0000328,9.31e-08,2;CL:0002573,9.31e-08,2;CL:0002376,9.31e-08,2;CL:0000218,9.31e-08,2;CL:0000692,9.31e-08,2;CL:0002377,9.31e-08,2;CL:0002375,9.31e-08,2;CL:0000333,1.11e-07,10;CL:0000095,1.11e-07,10;CL:0000243,1.11e-07,10;CL:0000123,1.11e-07,10;CL:0000125,1.11e-07,10;CL:0000030,1.11e-07,10;CL:0000339,1.11e-07,10;CL:0002605,7.50e-07,2;CL:0002604,7.50e-07,2;CL:0000708,8.62e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.66e-11,3;UBERON:0000478,3.66e-11,3;UBERON:0000158,3.66e-11,3;UBERON:0000358,8.32e-11,3;UBERON:0000307,8.32e-11,3;UBERON:0007010,8.32e-11,3;UBERON:0005795,4.41e-08,4;UBERON:0000995,4.41e-08,4;UBERON:0001987,6.39e-08,2;UBERON:0003124,6.39e-08,2;UBERON:0004340,6.39e-08,2;UBERON:0003210,8.62e-07,2|phase1_expression=0.160148847104794,0.697950815278722,0,0,0,0.16787927191189,0,0,3.23814060948833,9.83071010552373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,1.74420125104357,1.31811709640683,1.74986909166855,0.279972843250725,0,0,0,0,3.60163210450326,1.43266719969378,2.06268836910977,0,0,0,1.0165335962074,2.66788438833342,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,10.3744884866462,14.2074533000757,0.579728977403356,0,25.1589393471868,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.520455980298408,0.608930956624282,0,0.452167921657868,0.352766121407114,0,32.382540773203,0.289198713839823,0,0,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.712875546952214,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,1.39323986772945,0,0,0.852490498186778,1.03562886267751,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0,0.292399974850665,0,0.134206418760372,0,0,0,0,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0.610953983535943,0.969762435838129,0.280543279561274,0.252946148497029,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0.25462585178142,2.87696137450811,5.0261920300261,0.823684239564244,1.43768206527355,0,0,0,0,0.964887042726734,0,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0,0.975668239288994,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,1.21443210502468,1.46127928955656,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,11.2642419870581,30.2919861335263,0,0.49465875882444,0.322928853391811,0.0603129249281559,0.835606408021955,1.14898629821543,0,0,0,0,0.185194527369712,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0,0.209088296014469,0,0.404593039154462,0,0.26175594198403,0,0,0,0.747582730219894,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,13.9851150625661,11.124518219575,10.5767308309369,0.19318959403219,1.87682475451182,0.549454872801795,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.888986911206461,0.824140228955577,0,0.758091635291392,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.287177344778066,0,0.579421629724277,0,0,0.147198920134397,0,0.532427418478012,0,0,0.658765662907314,0.507687647350059,0.548783918618318,0,0.407412341537585,1.12228454331548,0.237270036248348,0,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p1@Csrnp1}} | ||
|EntrezGene=215418 | |||
|HGNC= | |||
|MCL_coexpression_id=2879 | |||
|UniProt=P59054 | |||
|association_with_transcript=-6bp_to_NM_153287,uc009sbv.1_5end | |||
|description=CAGE_peak_1_at_Csrnp1_5end | |||
|id=chr9:119893782..119893802,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.32e-11,3;CL:0000351,8.32e-11,3;CL:0002494,7.24e-10,3;CL:0000737,7.24e-10,3;CL:0000746,7.24e-10,3;CL:0000513,7.24e-10,3;CL:0000217,9.31e-08,2;CL:0000328,9.31e-08,2;CL:0002573,9.31e-08,2;CL:0002376,9.31e-08,2;CL:0000218,9.31e-08,2;CL:0000692,9.31e-08,2;CL:0002377,9.31e-08,2;CL:0002375,9.31e-08,2;CL:0000333,1.11e-07,10;CL:0000095,1.11e-07,10;CL:0000243,1.11e-07,10;CL:0000123,1.11e-07,10;CL:0000125,1.11e-07,10;CL:0000030,1.11e-07,10;CL:0000339,1.11e-07,10;CL:0002605,7.50e-07,2;CL:0002604,7.50e-07,2;CL:0000708,8.62e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.66e-11,3;UBERON:0000478,3.66e-11,3;UBERON:0000158,3.66e-11,3;UBERON:0000358,8.32e-11,3;UBERON:0000307,8.32e-11,3;UBERON:0007010,8.32e-11,3;UBERON:0005795,4.41e-08,4;UBERON:0000995,4.41e-08,4;UBERON:0001987,6.39e-08,2;UBERON:0003124,6.39e-08,2;UBERON:0004340,6.39e-08,2;UBERON:0003210,8.62e-07,2 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,0,0,0.16787927191189,0,0,3.23814060948833,9.83071010552373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0.782391344348039,1.74420125104357,1.31811709640683,1.74986909166855,0.279972843250725,0,0,0,0,3.60163210450326,1.43266719969378,2.06268836910977,0,0,0,1.0165335962074,2.66788438833342,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,10.3744884866462,14.2074533000757,0.579728977403356,0,25.1589393471868,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.520455980298408,0.608930956624282,0,0.452167921657868,0.352766121407114,0,32.382540773203,0.289198713839823,0,0,0.220841518460394,0,0,0.878342391034642,0.41889341362691,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.712875546952214,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,1.39323986772945,0,0,0.852490498186778,1.03562886267751,0.234526059981096,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.164167464079095,0,0.292399974850665,0,0.134206418760372,0,0,0,0,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0,0.199141273254367,0.379335801906163,0.342745537829186,0,0.610953983535943,0.969762435838129,0.280543279561274,0.252946148497029,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0.25462585178142,2.87696137450811,5.0261920300261,0.823684239564244,1.43768206527355,0,0,0,0,0.964887042726734,0,0.568474235311454,0,0.339490171550376,0,0.167506257441816,0,0.975668239288994,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,1.21443210502468,1.46127928955656,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,11.2642419870581,30.2919861335263,0,0.49465875882444,0.322928853391811,0.0603129249281559,0.835606408021955,1.14898629821543,0,0,0,0,0.185194527369712,0,0,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0,0.209088296014469,0,0.404593039154462,0,0.26175594198403,0,0,0,0.747582730219894,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,13.9851150625661,11.124518219575,10.5767308309369,0.19318959403219,1.87682475451182,0.549454872801795,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0.888986911206461,0.824140228955577,0,0.758091635291392,0.50695859978048,0.377252682772152,0.0936415074698824,0.192075457214608,0.287177344778066,0,0.579421629724277,0,0,0.147198920134397,0,0.532427418478012,0,0,0.658765662907314,0.507687647350059,0.548783918618318,0,0.407412341537585,1.12228454331548,0.237270036248348,0,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Csrnp1 | |||
}} |
Revision as of 17:09, 14 September 2013
Short description: | p1@Csrnp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Csrnp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2879 |
Association with transcript: | -6bp_to_NM_153287, uc009sbv.1_5end |
EntrezGene: | Csrnp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.32e-11 | 3 |
trophoblast cell | 8.32e-11 | 3 |
cardiocyte | 7.24e-10 | 3 |
striated muscle cell | 7.24e-10 | 3 |
cardiac muscle cell | 7.24e-10 | 3 |
cardiac muscle myoblast | 7.24e-10 | 3 |
insulating cell | 9.31e-08 | 2 |
myelin accumulating cell | 9.31e-08 | 2 |
Schwann cell | 9.31e-08 | 2 |
non-myelinating Schwann cell | 9.31e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 9.31e-08 | 2 |
terminal Schwann cell | 9.31e-08 | 2 |
immature Schwann cell | 9.31e-08 | 2 |
Schwann cell precursor | 9.31e-08 | 2 |
migratory neural crest cell | 1.11e-07 | 10 |
neuron associated cell | 1.11e-07 | 10 |
glial cell (sensu Vertebrata) | 1.11e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.11e-07 | 10 |
glial cell | 1.11e-07 | 10 |
glioblast | 1.11e-07 | 10 |
glioblast (sensu Vertebrata) | 1.11e-07 | 10 |
astrocyte of the cerebral cortex | 7.50e-07 | 2 |
astrocyte of the hippocampus | 7.50e-07 | 2 |
leptomeningeal cell | 8.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.66e-11 | 3 |
extraembryonic structure | 3.66e-11 | 3 |
membranous layer | 3.66e-11 | 3 |
blastocyst | 8.32e-11 | 3 |
blastula | 8.32e-11 | 3 |
cleaving embryo | 8.32e-11 | 3 |
embryonic uterus | 4.41e-08 | 4 |
uterus | 4.41e-08 | 4 |
placenta | 6.39e-08 | 2 |
chorion | 6.39e-08 | 2 |
allantois | 6.39e-08 | 2 |
blood-cerebrospinal fluid barrier | 8.62e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.