FFCP PHASE1:Mm9::chr10:76688464..76688474,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=255|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:76688464..76688474,+|id=chr10:76688464..76688474,+|ontology_enrichment_celltype=CL:0000764!2.91e-11!3;CL:0000765!2.91e-11!3;CL:0000038!2.91e-11!3;CL:0000547!2.91e-11!3|ontology_enrichment_celltype_v019_2=CL:0000764,1.58e-86,3;CL:0000765,1.58e-86,3;CL:0000038,1.58e-86,3;CL:0000547,1.58e-86,3;CL:0000050,8.84e-30,9;CL:0000839,5.26e-21,13;CL:0000763,2.72e-17,16;CL:0000049,9.58e-15,19;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32|ontology_enrichment_disease=DOID:2531!2.91e-11!3;DOID:0060083!2.91e-11!3;DOID:1240!2.91e-11!3|ontology_enrichment_disease_v019_2=DOID:2531,1.58e-86,3;DOID:0060083,1.58e-86,3;DOID:1240,1.58e-86,3;DOID:0050686,5.38e-44,6|ontology_enrichment_uberon=UBERON:0000310!1.58e-08!6;UBERON:0001443!1.58e-08!6|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9413496322238,22.7573971406291,31.6963362030877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:76688464..76688474,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=255 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:76688464..76688474,+ | |||
|id=chr10:76688464..76688474,+ | |||
|ontology_enrichment_celltype=CL:0000764!2.91e-11!3;CL:0000765!2.91e-11!3;CL:0000038!2.91e-11!3;CL:0000547!2.91e-11!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.58e-86,3;CL:0000765,1.58e-86,3;CL:0000038,1.58e-86,3;CL:0000547,1.58e-86,3;CL:0000050,8.84e-30,9;CL:0000839,5.26e-21,13;CL:0000763,2.72e-17,16;CL:0000049,9.58e-15,19;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32 | |||
|ontology_enrichment_disease=DOID:2531!2.91e-11!3;DOID:0060083!2.91e-11!3;DOID:1240!2.91e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.58e-86,3;DOID:0060083,1.58e-86,3;DOID:1240,1.58e-86,3;DOID:0050686,5.38e-44,6 | |||
|ontology_enrichment_uberon=UBERON:0000310!1.58e-08!6;UBERON:0001443!1.58e-08!6 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9413496322238,22.7573971406291,31.6963362030877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:76688464..76688474,+ | |||
}} |
Revision as of 17:26, 12 September 2013
Short description: | p@chr10:76688464..76688474, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:76688464..76688474, + |
Coexpression cluster: | MCL_coexpression_mm9:255 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.58e-86 | 3 |
erythroblast | 1.58e-86 | 3 |
erythroid progenitor cell | 1.58e-86 | 3 |
proerythroblast | 1.58e-86 | 3 |
megakaryocyte-erythroid progenitor cell | 8.84e-30 | 9 |
myeloid lineage restricted progenitor cell | 5.26e-21 | 13 |
myeloid cell | 2.72e-17 | 16 |
common myeloid progenitor | 9.58e-15 | 19 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.58e-86 | 3 |
immune system cancer | 1.58e-86 | 3 |
leukemia | 1.58e-86 | 3 |
organ system cancer | 5.38e-44 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.