FFCP PHASE1:Mm9::chr11:116153789..116153790,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:116153789..116153790,-|id=chr11:116153789..116153790,-|ontology_enrichment_celltype=CL:0000239!2.88e-21!6;CL:0000677!2.88e-21!6;CL:0000212!2.88e-21!6;CL:0000584!2.88e-21!6;CL:0000075!3.21e-18!7;CL:0002563!3.77e-14!9;CL:0002251!3.77e-14!9;CL:0002076!1.99e-08!15;CL:0000066!7.67e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,6.82e-11,6;CL:0000677,6.82e-11,6;CL:0000584,6.82e-11,6;CL:0000075,1.78e-09,7;CL:0002563,1.40e-07,9;CL:0002251,1.40e-07,9|ontology_enrichment_disease=DOID:0060100!2.07e-07!3;DOID:4045!2.07e-07!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.87e-21!15;UBERON:0003350!3.77e-14!9;UBERON:0004808!3.77e-14!9;UBERON:0001277!3.77e-14!9;UBERON:0001242!8.41e-14!13;UBERON:0000060!8.41e-14!13;UBERON:0001262!8.41e-14!13;UBERON:0004786!8.41e-14!13;UBERON:0004923!8.54e-13!24;UBERON:0000485!1.49e-11!11;UBERON:0001962!1.94e-11!2;UBERON:0001961!1.94e-11!2;UBERON:0001744!1.94e-11!2;UBERON:0002465!6.63e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0001962,9.35e-30,2;UBERON:0001961,9.35e-30,2;UBERON:0001744,9.35e-30,2;UBERON:0000344,1.27e-24,15;UBERON:0002465,3.11e-20,3;UBERON:0003199,6.79e-16,1;UBERON:0004923,1.32e-15,24;UBERON:0001242,7.19e-11,13;UBERON:0001262,7.19e-11,13;UBERON:0004786,7.19e-11,13;UBERON:0003350,1.40e-07,9;UBERON:0004808,1.40e-07,9;UBERON:0001277,1.40e-07,9|phase1_expression=0,0.697950815278722,0.909998478779072,6.95667686005709,6.01074875935617,0,0.700837921786577,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0.607425802169478,0,0,0,0,0,0,0,1.27993938234725,2.06468352960453,0,0,0.215471232685889,1.14014051673824,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0,0.588231488031014,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:116153789..116153790,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:116153789..116153790,- | |||
|id=chr11:116153789..116153790,- | |||
|ontology_enrichment_celltype=CL:0000239!2.88e-21!6;CL:0000677!2.88e-21!6;CL:0000212!2.88e-21!6;CL:0000584!2.88e-21!6;CL:0000075!3.21e-18!7;CL:0002563!3.77e-14!9;CL:0002251!3.77e-14!9;CL:0002076!1.99e-08!15;CL:0000066!7.67e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.82e-11,6;CL:0000677,6.82e-11,6;CL:0000584,6.82e-11,6;CL:0000075,1.78e-09,7;CL:0002563,1.40e-07,9;CL:0002251,1.40e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.07e-07!3;DOID:4045!2.07e-07!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.87e-21!15;UBERON:0003350!3.77e-14!9;UBERON:0004808!3.77e-14!9;UBERON:0001277!3.77e-14!9;UBERON:0001242!8.41e-14!13;UBERON:0000060!8.41e-14!13;UBERON:0001262!8.41e-14!13;UBERON:0004786!8.41e-14!13;UBERON:0004923!8.54e-13!24;UBERON:0000485!1.49e-11!11;UBERON:0001962!1.94e-11!2;UBERON:0001961!1.94e-11!2;UBERON:0001744!1.94e-11!2;UBERON:0002465!6.63e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,9.35e-30,2;UBERON:0001961,9.35e-30,2;UBERON:0001744,9.35e-30,2;UBERON:0000344,1.27e-24,15;UBERON:0002465,3.11e-20,3;UBERON:0003199,6.79e-16,1;UBERON:0004923,1.32e-15,24;UBERON:0001242,7.19e-11,13;UBERON:0001262,7.19e-11,13;UBERON:0004786,7.19e-11,13;UBERON:0003350,1.40e-07,9;UBERON:0004808,1.40e-07,9;UBERON:0001277,1.40e-07,9 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,6.95667686005709,6.01074875935617,0,0.700837921786577,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,0.607425802169478,0,0,0,0,0,0,0,1.27993938234725,2.06468352960453,0,0,0.215471232685889,1.14014051673824,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0,0.588231488031014,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:116153789..116153790,- | |||
}} |
Revision as of 18:51, 12 September 2013
Short description: | p@chr11:116153789..116153790, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:116153789..116153790, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.82e-11 | 6 |
gut absorptive cell | 6.82e-11 | 6 |
enterocyte | 6.82e-11 | 6 |
columnar/cuboidal epithelial cell | 1.78e-09 | 7 |
intestinal epithelial cell | 1.40e-07 | 9 |
epithelial cell of alimentary canal | 1.40e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 9.35e-30 | 2 |
mucosa-associated lymphoid tissue | 9.35e-30 | 2 |
lymphoid tissue | 9.35e-30 | 2 |
mucosa | 1.27e-24 | 15 |
lymphoid system | 3.11e-20 | 3 |
egg chamber | 6.79e-16 | 1 |
organ component layer | 1.32e-15 | 24 |
intestinal mucosa | 7.19e-11 | 13 |
wall of intestine | 7.19e-11 | 13 |
gastrointestinal system mucosa | 7.19e-11 | 13 |
epithelium of mucosa | 1.40e-07 | 9 |
gastrointestinal system epithelium | 1.40e-07 | 9 |
intestinal epithelium | 1.40e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.