FFCP PHASE1:Mm9::chr1:72895817..72895840,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=427|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72895817..72895840,-|id=chr1:72895817..72895840,-|ontology_enrichment_celltype=CL:0002453!2.34e-11!8;CL:0000128!3.37e-09!6;CL:0000126!3.37e-09!6;CL:0000127!3.37e-09!6;CL:0000333!1.30e-08!10;CL:0000095!1.30e-08!10;CL:0000243!1.30e-08!10;CL:0000123!1.30e-08!10;CL:0000125!1.30e-08!10;CL:0000030!1.30e-08!10;CL:0000339!1.30e-08!10|ontology_enrichment_celltype_v019_2=CL:0000128,1.64e-36,6;CL:0000126,1.64e-36,6;CL:0000127,1.64e-36,6;CL:0002453,2.45e-27,8;CL:0000333,8.02e-22,10;CL:0000095,8.02e-22,10;CL:0000243,8.02e-22,10;CL:0000123,8.02e-22,10;CL:0000125,8.02e-22,10;CL:0000030,8.02e-22,10;CL:0000339,8.02e-22,10;CL:0002605,1.38e-13,2;CL:0002604,1.38e-13,2;CL:0002603,3.20e-13,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!9.52e-08!22;UBERON:0007499!9.52e-08!22;UBERON:0006925!9.52e-08!22;UBERON:0009497!9.52e-08!22;UBERON:0000015!9.52e-08!22;UBERON:0002423!9.52e-08!22;UBERON:0006235!9.52e-08!22;UBERON:0008835!9.52e-08!22;UBERON:0003894!9.52e-08!22;UBERON:0004161!9.52e-08!22;UBERON:0008836!9.52e-08!22;UBERON:0009854!3.04e-07!23;UBERON:0009856!3.04e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.80e-16,22;UBERON:0007499,4.80e-16,22;UBERON:0006925,4.80e-16,22;UBERON:0009497,4.80e-16,22;UBERON:0000015,4.80e-16,22;UBERON:0002423,4.80e-16,22;UBERON:0006235,4.80e-16,22;UBERON:0008835,4.80e-16,22;UBERON:0003894,4.80e-16,22;UBERON:0004161,4.80e-16,22;UBERON:0008836,4.80e-16,22;UBERON:0009854,2.58e-15,23;UBERON:0009856,2.58e-15,23;UBERON:0002365,4.97e-14,25;UBERON:0002330,4.97e-14,25;UBERON:0005256,1.97e-07,45;UBERON:0003914,4.44e-07,47;UBERON:0002037,4.85e-07,4;UBERON:0002680,4.85e-07,4;UBERON:0001895,4.85e-07,4;UBERON:0010092,4.85e-07,4;UBERON:0006215,4.85e-07,4;UBERON:0005172,9.37e-07,49;UBERON:0005173,9.37e-07,49;UBERON:0002417,9.37e-07,49;UBERON:0000916,9.37e-07,49|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,5.01457859675027,13.6205433295373,13.4156630361256,1.81982348112971,7.18762821824858,0,0,0,0,0,0,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0,0.420649922702764,0.571301968807607,0,0,0,0.919218786610021,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.509196819251581,0,0,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0.889357881261447,0,0,0,0,0,0,0.575392274901621,1.13494658742525,2.47105271869273,1.43768206527355,1.86070473834252,1.5601883655728,1.01031551178845,0.896987067609561,1.92977408545347,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0.643011105094777,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0.627264888043406,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0,0.429742108096597,0,0,0|short_description=p@chr1:72895817..72895840,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=427 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:72895817..72895840,- | |||
|id=chr1:72895817..72895840,- | |||
|ontology_enrichment_celltype=CL:0002453!2.34e-11!8;CL:0000128!3.37e-09!6;CL:0000126!3.37e-09!6;CL:0000127!3.37e-09!6;CL:0000333!1.30e-08!10;CL:0000095!1.30e-08!10;CL:0000243!1.30e-08!10;CL:0000123!1.30e-08!10;CL:0000125!1.30e-08!10;CL:0000030!1.30e-08!10;CL:0000339!1.30e-08!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.64e-36,6;CL:0000126,1.64e-36,6;CL:0000127,1.64e-36,6;CL:0002453,2.45e-27,8;CL:0000333,8.02e-22,10;CL:0000095,8.02e-22,10;CL:0000243,8.02e-22,10;CL:0000123,8.02e-22,10;CL:0000125,8.02e-22,10;CL:0000030,8.02e-22,10;CL:0000339,8.02e-22,10;CL:0002605,1.38e-13,2;CL:0002604,1.38e-13,2;CL:0002603,3.20e-13,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.52e-08!22;UBERON:0007499!9.52e-08!22;UBERON:0006925!9.52e-08!22;UBERON:0009497!9.52e-08!22;UBERON:0000015!9.52e-08!22;UBERON:0002423!9.52e-08!22;UBERON:0006235!9.52e-08!22;UBERON:0008835!9.52e-08!22;UBERON:0003894!9.52e-08!22;UBERON:0004161!9.52e-08!22;UBERON:0008836!9.52e-08!22;UBERON:0009854!3.04e-07!23;UBERON:0009856!3.04e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.80e-16,22;UBERON:0007499,4.80e-16,22;UBERON:0006925,4.80e-16,22;UBERON:0009497,4.80e-16,22;UBERON:0000015,4.80e-16,22;UBERON:0002423,4.80e-16,22;UBERON:0006235,4.80e-16,22;UBERON:0008835,4.80e-16,22;UBERON:0003894,4.80e-16,22;UBERON:0004161,4.80e-16,22;UBERON:0008836,4.80e-16,22;UBERON:0009854,2.58e-15,23;UBERON:0009856,2.58e-15,23;UBERON:0002365,4.97e-14,25;UBERON:0002330,4.97e-14,25;UBERON:0005256,1.97e-07,45;UBERON:0003914,4.44e-07,47;UBERON:0002037,4.85e-07,4;UBERON:0002680,4.85e-07,4;UBERON:0001895,4.85e-07,4;UBERON:0010092,4.85e-07,4;UBERON:0006215,4.85e-07,4;UBERON:0005172,9.37e-07,49;UBERON:0005173,9.37e-07,49;UBERON:0002417,9.37e-07,49;UBERON:0000916,9.37e-07,49 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,5.01457859675027,13.6205433295373,13.4156630361256,1.81982348112971,7.18762821824858,0,0,0,0,0,0,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0,0.420649922702764,0.571301968807607,0,0,0,0.919218786610021,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.509196819251581,0,0,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0.204109497453984,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0.889357881261447,0,0,0,0,0,0,0.575392274901621,1.13494658742525,2.47105271869273,1.43768206527355,1.86070473834252,1.5601883655728,1.01031551178845,0.896987067609561,1.92977408545347,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.388076051348264,0.643011105094777,0,0,0.164549020602121,0.304464949114599,0,0.42366414172764,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0.627264888043406,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr1:72895817..72895840,- | |||
}} |
Revision as of 20:52, 13 September 2013
Short description: | p@chr1:72895817..72895840, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895817..72895840, - |
Coexpression cluster: | MCL_coexpression_mm9:427 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.64e-36 | 6 |
macroglial cell | 1.64e-36 | 6 |
astrocyte | 1.64e-36 | 6 |
oligodendrocyte precursor cell | 2.45e-27 | 8 |
migratory neural crest cell | 8.02e-22 | 10 |
neuron associated cell | 8.02e-22 | 10 |
glial cell (sensu Vertebrata) | 8.02e-22 | 10 |
neuron associated cell (sensu Vertebrata) | 8.02e-22 | 10 |
glial cell | 8.02e-22 | 10 |
glioblast | 8.02e-22 | 10 |
glioblast (sensu Vertebrata) | 8.02e-22 | 10 |
astrocyte of the cerebral cortex | 1.38e-13 | 2 |
astrocyte of the hippocampus | 1.38e-13 | 2 |
astrocyte of the cerebellum | 3.20e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 4.80e-16 | 22 |
epithelial sac | 4.80e-16 | 22 |
digestive gland | 4.80e-16 | 22 |
epithelium of foregut-midgut junction | 4.80e-16 | 22 |
anatomical boundary | 4.80e-16 | 22 |
hepatobiliary system | 4.80e-16 | 22 |
foregut-midgut junction | 4.80e-16 | 22 |
hepatic diverticulum | 4.80e-16 | 22 |
liver primordium | 4.80e-16 | 22 |
septum transversum | 4.80e-16 | 22 |
liver bud | 4.80e-16 | 22 |
digestive tract diverticulum | 2.58e-15 | 23 |
sac | 2.58e-15 | 23 |
exocrine gland | 4.97e-14 | 25 |
exocrine system | 4.97e-14 | 25 |
trunk mesenchyme | 1.97e-07 | 45 |
epithelial tube | 4.44e-07 | 47 |
cerebellum | 4.85e-07 | 4 |
regional part of metencephalon | 4.85e-07 | 4 |
metencephalon | 4.85e-07 | 4 |
future metencephalon | 4.85e-07 | 4 |
rhombic lip | 4.85e-07 | 4 |
abdomen element | 9.37e-07 | 49 |
abdominal segment element | 9.37e-07 | 49 |
abdominal segment of trunk | 9.37e-07 | 49 |
abdomen | 9.37e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.