FFCP PHASE1:Mm9::chr18:25912166..25912235,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108013|HGNC=|MCL_coexpression_id=1|UniProt=Q7TSY6|association_with_transcript=248bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end|description=CAGE_peak_3_at_Celf4_5end|id=chr18:25912166..25912235,-|ontology_enrichment_celltype=CL:0000540!2.71e-16!33;CL:0000047!2.71e-16!33;CL:0000031!2.71e-16!33;CL:0000404!2.71e-16!33;CL:0000117!6.14e-16!23;CL:0000337!6.14e-16!23;CL:0000393!1.57e-12!39;CL:0000211!1.57e-12!39;CL:0002319!1.40e-11!43;CL:0000221!1.42e-11!44;CL:0000133!1.42e-11!44;CL:0000055!9.30e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.80e-21,23;CL:0000337,4.80e-21,23;CL:0000540,1.02e-19,33;CL:0000047,1.02e-19,33;CL:0000031,1.02e-19,33;CL:0000404,1.02e-19,33;CL:0000393,3.83e-15,39;CL:0000211,3.83e-15,39;CL:0002319,7.70e-13,43;CL:0000221,2.47e-12,44;CL:0000133,2.47e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.00e-30!75;UBERON:0001016!5.00e-30!75;UBERON:0001017!1.29e-29!73;UBERON:0005743!1.29e-29!73;UBERON:0002346!1.57e-28!71;UBERON:0003075!1.57e-28!71;UBERON:0007284!1.57e-28!71;UBERON:0004121!2.39e-26!102;UBERON:0000924!2.39e-26!102;UBERON:0006601!2.39e-26!102;UBERON:0001049!2.57e-25!52;UBERON:0005068!2.57e-25!52;UBERON:0006241!2.57e-25!52;UBERON:0007135!2.57e-25!52;UBERON:0000955!3.65e-24!50;UBERON:0006238!3.65e-24!50;UBERON:0000033!5.64e-24!63;UBERON:0002616!2.88e-23!49;UBERON:0003056!2.06e-22!49;UBERON:0002020!7.62e-22!34;UBERON:0003080!2.63e-20!40;UBERON:0002780!1.41e-19!39;UBERON:0001890!1.41e-19!39;UBERON:0006240!1.41e-19!39;UBERON:0002791!2.18e-18!29;UBERON:0003528!2.18e-18!29;UBERON:0001893!2.18e-18!29;UBERON:0000956!1.30e-12!21;UBERON:0001869!1.30e-12!21;UBERON:0000203!1.30e-12!21;UBERON:0007811!4.37e-12!86;UBERON:0000153!3.05e-10!94;UBERON:0002619!3.78e-10!17;UBERON:0002021!3.55e-09!10;UBERON:0000411!3.55e-09!10;UBERON:0001950!3.55e-09!10;UBERON:0002420!4.81e-07!8;UBERON:0007245!4.81e-07!8;UBERON:0010009!4.81e-07!8;UBERON:0010011!4.81e-07!8;UBERON:0000454!4.81e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.23e-34,73;UBERON:0002346,5.23e-33,64;UBERON:0003075,5.23e-33,64;UBERON:0007284,5.23e-33,64;UBERON:0001016,2.44e-32,75;UBERON:0000073,9.70e-32,54;UBERON:0002020,1.04e-29,34;UBERON:0001049,1.10e-29,52;UBERON:0005068,1.10e-29,52;UBERON:0006241,1.10e-29,52;UBERON:0007135,1.10e-29,52;UBERON:0004121,3.20e-28,95;UBERON:0000924,3.20e-28,95;UBERON:0006601,3.20e-28,95;UBERON:0010371,1.05e-26,73;UBERON:0000955,2.27e-25,47;UBERON:0006238,2.27e-25,47;UBERON:0003528,5.32e-25,29;UBERON:0002791,5.32e-25,29;UBERON:0001893,5.32e-25,29;UBERON:0002616,3.12e-24,46;UBERON:0003056,7.80e-24,49;UBERON:0003080,2.07e-22,40;UBERON:0002780,1.82e-21,39;UBERON:0001890,1.82e-21,39;UBERON:0006240,1.82e-21,39;UBERON:0010314,1.37e-17,92;UBERON:0000956,3.95e-17,21;UBERON:0001869,3.95e-17,21;UBERON:0000203,3.95e-17,21;UBERON:0002619,8.87e-14,17;UBERON:0002021,7.04e-12,10;UBERON:0000411,7.04e-12,10;UBERON:0001950,7.04e-12,10;UBERON:0002420,5.36e-09,8;UBERON:0007245,5.36e-09,8;UBERON:0010009,5.36e-09,8;UBERON:0010011,5.36e-09,8;UBERON:0000454,5.36e-09,8;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,14.3644687210314,8.99284664762456,10.775133859605,0,0,0,0,0,0,0.384218305321555,7.36196247390191,6.07526722492608,9.04397333810943,8.56952953211411,11.7060326704355,9.30930074033651,11.2139201091337,7.35375029288017,9.91042928994498,12.896421146604,16.2822925251618,17.5408762681158,18.0230657896747,16.6692278578163,12.0048689570594,10.1297269805702,16.5022107598955,16.4992007865254,16.3727432918968,11.183966749518,0.530083353332288,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,10.8328894894272,22.4107976290397,0,0,0,0,16.027598416316,15.5550204958333,21.2355855070741,24.1615805067264,23.0143911597297,10.8049783170971,20.766881672673,0.611036183101898,0,0,1.68353484709179,0.130120442962704,0,0.900310649026746,2.10986744970001,3.46986145671772,3.71529788826064,3.84177070694888,5.69147415625834,0,0,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0.233530684734339,0,0,0,0,0,0,24.6039239820029,19.2431625149262,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,8.32202974804643,0,0,1.57754109708128,1.95219372148319,2.58508077279359,0.716906393857656,0.668396022247182,0,1.21443210502468,2.92255857911312,3.95287777946523,24.7417413644791,0.141940085208269,0,1.30309567482861,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0.428674070063185,0.354680467284547,0.891844088010353,1.15184314421485,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,14.1187960654267,18.8733346967943,18.9055519435001,15.1230800462445,22.6077231524312,24.9279986138601,24.300810008345,23.4167025676595,19.0319811773366,21.7459330935764,0.518936737920883,1.59609949360412,1.53660245178721,1.94485373654635,1.67690530102386,1.65459157605013,2.00022055021454,2.26638562962784,1.60459604795908,3.03236654116557,1.52087579934144,2.26351609663291,2.71560371662659,2.11283002936069,3.84817642002609,1.42888107384922,3.1288768005111,2.70072908649187,2.06042950401653,2.06078488188156,2.05721551431249,1.06485483695602,2.38436189947321,1.88950341622027,1.97629698872194,2.36920902096694,2.0122077016005,1.05227884575137,3.66671107383827,1.68342681497322,1.77952527186261,3.15214343601803,2.86461730218783,2.01417893541756,0.964533054905707,4.74640098082097,2.10538447600868,1.71896843238639,0.765153328275374,0.220591419119515,0|short_description=p3@Celf4}} | ||
|EntrezGene=108013 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q7TSY6 | |||
|association_with_transcript=248bp_to_ENSMUST00000025117,ENSMUST00000078609,ENSMUST00000115816,NM_001146292,NM_001146293,NM_001146294,NM_001146295,NM_001174074,NM_133195,uc008ehk.2,uc008ehl.2,uc012ban.1,uc012bao.1,uc012bap.1,uc012baq.1_5end | |||
|description=CAGE_peak_3_at_Celf4_5end | |||
|id=chr18:25912166..25912235,- | |||
|ontology_enrichment_celltype=CL:0000540!2.71e-16!33;CL:0000047!2.71e-16!33;CL:0000031!2.71e-16!33;CL:0000404!2.71e-16!33;CL:0000117!6.14e-16!23;CL:0000337!6.14e-16!23;CL:0000393!1.57e-12!39;CL:0000211!1.57e-12!39;CL:0002319!1.40e-11!43;CL:0000221!1.42e-11!44;CL:0000133!1.42e-11!44;CL:0000055!9.30e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.80e-21,23;CL:0000337,4.80e-21,23;CL:0000540,1.02e-19,33;CL:0000047,1.02e-19,33;CL:0000031,1.02e-19,33;CL:0000404,1.02e-19,33;CL:0000393,3.83e-15,39;CL:0000211,3.83e-15,39;CL:0002319,7.70e-13,43;CL:0000221,2.47e-12,44;CL:0000133,2.47e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.00e-30!75;UBERON:0001016!5.00e-30!75;UBERON:0001017!1.29e-29!73;UBERON:0005743!1.29e-29!73;UBERON:0002346!1.57e-28!71;UBERON:0003075!1.57e-28!71;UBERON:0007284!1.57e-28!71;UBERON:0004121!2.39e-26!102;UBERON:0000924!2.39e-26!102;UBERON:0006601!2.39e-26!102;UBERON:0001049!2.57e-25!52;UBERON:0005068!2.57e-25!52;UBERON:0006241!2.57e-25!52;UBERON:0007135!2.57e-25!52;UBERON:0000955!3.65e-24!50;UBERON:0006238!3.65e-24!50;UBERON:0000033!5.64e-24!63;UBERON:0002616!2.88e-23!49;UBERON:0003056!2.06e-22!49;UBERON:0002020!7.62e-22!34;UBERON:0003080!2.63e-20!40;UBERON:0002780!1.41e-19!39;UBERON:0001890!1.41e-19!39;UBERON:0006240!1.41e-19!39;UBERON:0002791!2.18e-18!29;UBERON:0003528!2.18e-18!29;UBERON:0001893!2.18e-18!29;UBERON:0000956!1.30e-12!21;UBERON:0001869!1.30e-12!21;UBERON:0000203!1.30e-12!21;UBERON:0007811!4.37e-12!86;UBERON:0000153!3.05e-10!94;UBERON:0002619!3.78e-10!17;UBERON:0002021!3.55e-09!10;UBERON:0000411!3.55e-09!10;UBERON:0001950!3.55e-09!10;UBERON:0002420!4.81e-07!8;UBERON:0007245!4.81e-07!8;UBERON:0010009!4.81e-07!8;UBERON:0010011!4.81e-07!8;UBERON:0000454!4.81e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.23e-34,73;UBERON:0002346,5.23e-33,64;UBERON:0003075,5.23e-33,64;UBERON:0007284,5.23e-33,64;UBERON:0001016,2.44e-32,75;UBERON:0000073,9.70e-32,54;UBERON:0002020,1.04e-29,34;UBERON:0001049,1.10e-29,52;UBERON:0005068,1.10e-29,52;UBERON:0006241,1.10e-29,52;UBERON:0007135,1.10e-29,52;UBERON:0004121,3.20e-28,95;UBERON:0000924,3.20e-28,95;UBERON:0006601,3.20e-28,95;UBERON:0010371,1.05e-26,73;UBERON:0000955,2.27e-25,47;UBERON:0006238,2.27e-25,47;UBERON:0003528,5.32e-25,29;UBERON:0002791,5.32e-25,29;UBERON:0001893,5.32e-25,29;UBERON:0002616,3.12e-24,46;UBERON:0003056,7.80e-24,49;UBERON:0003080,2.07e-22,40;UBERON:0002780,1.82e-21,39;UBERON:0001890,1.82e-21,39;UBERON:0006240,1.82e-21,39;UBERON:0010314,1.37e-17,92;UBERON:0000956,3.95e-17,21;UBERON:0001869,3.95e-17,21;UBERON:0000203,3.95e-17,21;UBERON:0002619,8.87e-14,17;UBERON:0002021,7.04e-12,10;UBERON:0000411,7.04e-12,10;UBERON:0001950,7.04e-12,10;UBERON:0002420,5.36e-09,8;UBERON:0007245,5.36e-09,8;UBERON:0010009,5.36e-09,8;UBERON:0010011,5.36e-09,8;UBERON:0000454,5.36e-09,8;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,14.3644687210314,8.99284664762456,10.775133859605,0,0,0,0,0,0,0.384218305321555,7.36196247390191,6.07526722492608,9.04397333810943,8.56952953211411,11.7060326704355,9.30930074033651,11.2139201091337,7.35375029288017,9.91042928994498,12.896421146604,16.2822925251618,17.5408762681158,18.0230657896747,16.6692278578163,12.0048689570594,10.1297269805702,16.5022107598955,16.4992007865254,16.3727432918968,11.183966749518,0.530083353332288,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,10.8328894894272,22.4107976290397,0,0,0,0,16.027598416316,15.5550204958333,21.2355855070741,24.1615805067264,23.0143911597297,10.8049783170971,20.766881672673,0.611036183101898,0,0,1.68353484709179,0.130120442962704,0,0.900310649026746,2.10986744970001,3.46986145671772,3.71529788826064,3.84177070694888,5.69147415625834,0,0,0,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.465067889500816,0,0.233530684734339,0,0,0,0,0,0,24.6039239820029,19.2431625149262,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42202359951168,8.32202974804643,0,0,1.57754109708128,1.95219372148319,2.58508077279359,0.716906393857656,0.668396022247182,0,1.21443210502468,2.92255857911312,3.95287777946523,24.7417413644791,0.141940085208269,0,1.30309567482861,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,0,0.129358683782755,0.428674070063185,0.354680467284547,0.891844088010353,1.15184314421485,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0,0,7.23158677840988,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,14.1187960654267,18.8733346967943,18.9055519435001,15.1230800462445,22.6077231524312,24.9279986138601,24.300810008345,23.4167025676595,19.0319811773366,21.7459330935764,0.518936737920883,1.59609949360412,1.53660245178721,1.94485373654635,1.67690530102386,1.65459157605013,2.00022055021454,2.26638562962784,1.60459604795908,3.03236654116557,1.52087579934144,2.26351609663291,2.71560371662659,2.11283002936069,3.84817642002609,1.42888107384922,3.1288768005111,2.70072908649187,2.06042950401653,2.06078488188156,2.05721551431249,1.06485483695602,2.38436189947321,1.88950341622027,1.97629698872194,2.36920902096694,2.0122077016005,1.05227884575137,3.66671107383827,1.68342681497322,1.77952527186261,3.15214343601803,2.86461730218783,2.01417893541756,0.964533054905707,4.74640098082097,2.10538447600868,1.71896843238639,0.765153328275374,0.220591419119515,0 | |||
|short_description=p3@Celf4 | |||
}} |
Revision as of 15:51, 13 September 2013
Short description: | p3@Celf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Celf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 248bp_to_ENSMUST00000025117, ENSMUST00000078609, ENSMUST00000115816, NM_001146292, NM_001146293, NM_001146294, NM_001146295, NM_001174074, NM_133195, uc008ehk.2, uc008ehl.2, uc012ban.1, uc012bao.1, uc012bap.1, uc012baq.1_5end |
EntrezGene: | Celf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.80e-21 | 23 |
neuroblast (sensu Vertebrata) | 4.80e-21 | 23 |
neuron | 1.02e-19 | 33 |
neuronal stem cell | 1.02e-19 | 33 |
neuroblast | 1.02e-19 | 33 |
electrically signaling cell | 1.02e-19 | 33 |
electrically responsive cell | 3.83e-15 | 39 |
electrically active cell | 3.83e-15 | 39 |
neural cell | 7.70e-13 | 43 |
ectodermal cell | 2.47e-12 | 44 |
neurectodermal cell | 2.47e-12 | 44 |
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