FFCP PHASE1:Mm9::chr11:106134144..106134174,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=83796|HGNC=|UniProt=Q99JR8,Q3TXH6|association_with_transcript=111bp_to_ENSMUST00000021052,NM_001130187,uc007lyp.2_5end|description=CAGE_peak_3_at_Smarcd2_5end|id=chr11:106134144..106134174,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=3.36312578920067,1.74487703819681,0.909998478779072,2.41971369045464,1.50268718983904,2.51818907867835,2.10251376535973,0,0.422366166455,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,1.33243904726265,2.02475267389826,1.39912375625629,0.473193248037357,0.411343300817216,0,1.87095238332354,2.38298282882125,1.56719873483361,1.91990907352088,0.68822784320151,2.29692785646008,3.87685796543167,2.37018355954478,1.90023419456374,6.30075324399827,1.77384408524244,1.90509202037889,3.07532393792285,0,5.19932915552294,4.82080471539628,5.71674197534634,0.418531630736908,1.5626706890476,0,0.588231488031014,0,0.971020706062307,2.26614272356039,0.912392380975631,1.83546752161682,9.38869613217647,1.09012578190223,3.29529274101708,1.94429899074283,4.19959264876088,1.43752564364972,0,0.725362142011344,0,2.57259436035947,4.01146815914259,1.54701627683233,0.606949382578793,0.528990979272033,0,0.677689064138264,1.77858959222228,3.1496490104849,1.97773272513395,3.5524005747305,2.99600110518405,1.15265491596466,0.725827286159344,0.270011876663381,0.841299845405528,0,0.662605622854841,0.61245399607477,0.766763768145891,0,1.10115880999389,0.383062014255563,0.307213066512487,0.131886287730194,0.640413505216868,1.56274011167028,0,0,0.763991238884051,0.294628585473668,0.854230084794618,0.559198337475902,0.605809546665472,0.755715601067855,2.6087803983151,1.72084775396277,1.3599426674155,1.61910957491345,1.29955283489534,3.13618820968135,1.96622188184453,2.04516387093669,2.07828803682295,1.06001872353102,2.25349471642689,2.56652954828636,0,0,1.08245520505607,1.26679932737549,0.505524445014783,2.05530983494308,0.258937883647172,1.7813056687779,3.99016251562112,1.82679286987285,3.45923245884088,1.80867168663147,2.82212897125692,3.89566433121994,1.73036477414062,1.01219549843938,3.5384422077995,2.26473589926373,1.76673214768315,1.93950101254089,1.86391761218122,2.34224637609238,3.97948742945565,1.02182822083437,1.31796636956512,0.599902730993408,1.77898317902291,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.62336413367868,0.486723789203273,3.36069900706044,3.73220911830279,1.76905930903572,0.841767423545896,1.43132487258974,2.5289231487682,1.26043490863744,2.10986744970001,1.15662048557257,1.15302348256365,2.34254311399322,2.58703370739016,2.80238390812695,2.08016688184601,2.99116911078713,3.94552318369635,4.72680323683516,4.52727816478817,3.08673204611915,1.99034266818493,0.702213187313235,1.28673953557358,1.42081749697796,0.621377317606506,2.57978665979206,0.720248245844059,1.42046841351126,0.983821158737019,1.07986979021165,0.697601834251224,1.07309360559848,0.817357396570186,1.48103864922132,1.64167464079095,0.729619285912702,1.46199987425332,1.09775057645525,1.07365135008297,0.630869845692382,0.411618449517138,2.31293148088659,1.85115396664481,2.34617075588757,3.71578674976702,2.06187938115349,2.8235693447268,2.00140239460383,2.09248188723815,0.474529061544512,1.4822905925161,2.5133520880027,2.18852119245266,2.53453313254856,2.69645822596266,2.37751854862164,2.98711909881551,4.74169752382704,2.97046132785295,2.25415471346161,2.03651327845314,2.32742984601151,1.82353131714828,2.59269802209455,2.06654207171443,2.04098346193787,1.85095745882701,2.07516838961004,1.33476084572875,2.55526693647164,1.79889689907883,2.23146133527353,1.4470629585145,2.03700681425136,1.15078454980324,2.10775794807546,1.64736847912849,4.31304619582064,2.23284568601102,0.936113019343682,2.02063102357689,1.07638448113147,2.8946611281802,2.95605104266567,1.89491411770485,3.25929952884052,3.39490171550376,3.98973422090454,2.34508760418542,4.04674189506223,4.68320754858717,2.83743259391144,4.4292937929755,5.42146213435456,2.78567635016755,2.07221978239075,3.03763023021174,0,0,1.96705709207614,3.58717770196152,0.481651769963376,0.586058432961016,1.47541450839008,0.504941854408746,0.315508219416257,0.390438744296638,1.07711698866399,1.67278158566786,2.45078541490634,0,0.404810701674894,1.16902343164525,1.58115111178609,1.60660658210904,2.55492153374884,5.52003371368491,3.4206261464251,3.62934270539578,2.65490276679926,3.15614827001476,3.32555912661226,3.20628635585027,3.54362271456927,1.84461088766356,2.06742634534577,3.63533729477506,2.49548164869305,1.8962205476149,1.05418608574999,2.06271086496374,1.02131881726136,2.52085531643834,2.58717367565509,2.57204442037911,2.48276327099183,2.85390108163313,3.45552943264454,2.43571959291679,1.87737366450968,1.0591603543191,1.32317038832977,2.80306630000516,4.68246837418126,3.86002719540197,5.13301079213487,4.43180429311665,3.49777003955821,0.556275906031529,1.36696704638282,3.714963623338,1.66675074632741,1.31857919903284,1.50363650493128,0.915112692826091,1.35982743995084,1.25956307091292,1.24379976423981,1.90934123603023,3.00519193902079,2.43983360552218,3.13215488383224,2.29997125615916,2.40198820120795,2.02296519577231,3.14083131756277,1.83229159388821,2.20345454596048,1.86401793926078,0.56369293868419,3.88743019714345,2.15096037594227,3.30567020184881,3.09983576346555,4.73077151374179,1.5256441023948,3.77592716047455,2.20204623293993,2.41584120826006,1.44015003128933,1.58005560314089,5.87903124341476,4.72470402958205,5.06691209613401,5.19177417435696,3.17890167650024,2.40390899039938,2.36303243479324,2.72609414859999,4.19137436602499,2.82313318383153,2.43644701849381,2.21287235772758,2.22066114144981,1.58711268530648,1.10992976687032,0.358855426437903,0.671538465456314,3.09103350451505,1.87682475451182,3.6630324853453,4.07299920250225,2.50786052017682,0.564751842617067,0,0,0.343706364687375,0,0.755393897389701,0,0,0,0.51776031175182,1.764384908931,2.39414924040619,2.56100408631201,4.132814190161,3.35381060204772,2.94149613520023,1.33348036680969,2.67845574410562,1.92551525755089,2.52697211763797,1.2673964994512,2.26351609663291,2.62196220915671,1.92075457214608,2.01024141344646,1.42888107384922,2.43357084484197,2.31491064556446,3.70877310722976,1.32479028120958,1.37147700954166,0.887379030796687,2.14592570952589,1.74415699958794,1.97629698872194,2.70766745253365,1.82927972872773,3.41990624869196,2.98769050460896,0.561142271657738,1.66089025373844,1.67457620038458,1.22769312950907,2.32405261778949,0.964533054905707,3.74715866906919,3.97683734357194,4.94203424311086,1.72159498861959,3.30887128679273,1.62307484934295|short_description=p3@Smarcd2}} | ||
|EntrezGene=83796 | |||
|HGNC= | |||
|UniProt=Q99JR8,Q3TXH6 | |||
|association_with_transcript=111bp_to_ENSMUST00000021052,NM_001130187,uc007lyp.2_5end | |||
|description=CAGE_peak_3_at_Smarcd2_5end | |||
|id=chr11:106134144..106134174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=3.36312578920067,1.74487703819681,0.909998478779072,2.41971369045464,1.50268718983904,2.51818907867835,2.10251376535973,0,0.422366166455,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,1.33243904726265,2.02475267389826,1.39912375625629,0.473193248037357,0.411343300817216,0,1.87095238332354,2.38298282882125,1.56719873483361,1.91990907352088,0.68822784320151,2.29692785646008,3.87685796543167,2.37018355954478,1.90023419456374,6.30075324399827,1.77384408524244,1.90509202037889,3.07532393792285,0,5.19932915552294,4.82080471539628,5.71674197534634,0.418531630736908,1.5626706890476,0,0.588231488031014,0,0.971020706062307,2.26614272356039,0.912392380975631,1.83546752161682,9.38869613217647,1.09012578190223,3.29529274101708,1.94429899074283,4.19959264876088,1.43752564364972,0,0.725362142011344,0,2.57259436035947,4.01146815914259,1.54701627683233,0.606949382578793,0.528990979272033,0,0.677689064138264,1.77858959222228,3.1496490104849,1.97773272513395,3.5524005747305,2.99600110518405,1.15265491596466,0.725827286159344,0.270011876663381,0.841299845405528,0,0.662605622854841,0.61245399607477,0.766763768145891,0,1.10115880999389,0.383062014255563,0.307213066512487,0.131886287730194,0.640413505216868,1.56274011167028,0,0,0.763991238884051,0.294628585473668,0.854230084794618,0.559198337475902,0.605809546665472,0.755715601067855,2.6087803983151,1.72084775396277,1.3599426674155,1.61910957491345,1.29955283489534,3.13618820968135,1.96622188184453,2.04516387093669,2.07828803682295,1.06001872353102,2.25349471642689,2.56652954828636,0,0,1.08245520505607,1.26679932737549,0.505524445014783,2.05530983494308,0.258937883647172,1.7813056687779,3.99016251562112,1.82679286987285,3.45923245884088,1.80867168663147,2.82212897125692,3.89566433121994,1.73036477414062,1.01219549843938,3.5384422077995,2.26473589926373,1.76673214768315,1.93950101254089,1.86391761218122,2.34224637609238,3.97948742945565,1.02182822083437,1.31796636956512,0.599902730993408,1.77898317902291,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.62336413367868,0.486723789203273,3.36069900706044,3.73220911830279,1.76905930903572,0.841767423545896,1.43132487258974,2.5289231487682,1.26043490863744,2.10986744970001,1.15662048557257,1.15302348256365,2.34254311399322,2.58703370739016,2.80238390812695,2.08016688184601,2.99116911078713,3.94552318369635,4.72680323683516,4.52727816478817,3.08673204611915,1.99034266818493,0.702213187313235,1.28673953557358,1.42081749697796,0.621377317606506,2.57978665979206,0.720248245844059,1.42046841351126,0.983821158737019,1.07986979021165,0.697601834251224,1.07309360559848,0.817357396570186,1.48103864922132,1.64167464079095,0.729619285912702,1.46199987425332,1.09775057645525,1.07365135008297,0.630869845692382,0.411618449517138,2.31293148088659,1.85115396664481,2.34617075588757,3.71578674976702,2.06187938115349,2.8235693447268,2.00140239460383,2.09248188723815,0.474529061544512,1.4822905925161,2.5133520880027,2.18852119245266,2.53453313254856,2.69645822596266,2.37751854862164,2.98711909881551,4.74169752382704,2.97046132785295,2.25415471346161,2.03651327845314,2.32742984601151,1.82353131714828,2.59269802209455,2.06654207171443,2.04098346193787,1.85095745882701,2.07516838961004,1.33476084572875,2.55526693647164,1.79889689907883,2.23146133527353,1.4470629585145,2.03700681425136,1.15078454980324,2.10775794807546,1.64736847912849,4.31304619582064,2.23284568601102,0.936113019343682,2.02063102357689,1.07638448113147,2.8946611281802,2.95605104266567,1.89491411770485,3.25929952884052,3.39490171550376,3.98973422090454,2.34508760418542,4.04674189506223,4.68320754858717,2.83743259391144,4.4292937929755,5.42146213435456,2.78567635016755,2.07221978239075,3.03763023021174,0,0,1.96705709207614,3.58717770196152,0.481651769963376,0.586058432961016,1.47541450839008,0.504941854408746,0.315508219416257,0.390438744296638,1.07711698866399,1.67278158566786,2.45078541490634,0,0.404810701674894,1.16902343164525,1.58115111178609,1.60660658210904,2.55492153374884,5.52003371368491,3.4206261464251,3.62934270539578,2.65490276679926,3.15614827001476,3.32555912661226,3.20628635585027,3.54362271456927,1.84461088766356,2.06742634534577,3.63533729477506,2.49548164869305,1.8962205476149,1.05418608574999,2.06271086496374,1.02131881726136,2.52085531643834,2.58717367565509,2.57204442037911,2.48276327099183,2.85390108163313,3.45552943264454,2.43571959291679,1.87737366450968,1.0591603543191,1.32317038832977,2.80306630000516,4.68246837418126,3.86002719540197,5.13301079213487,4.43180429311665,3.49777003955821,0.556275906031529,1.36696704638282,3.714963623338,1.66675074632741,1.31857919903284,1.50363650493128,0.915112692826091,1.35982743995084,1.25956307091292,1.24379976423981,1.90934123603023,3.00519193902079,2.43983360552218,3.13215488383224,2.29997125615916,2.40198820120795,2.02296519577231,3.14083131756277,1.83229159388821,2.20345454596048,1.86401793926078,0.56369293868419,3.88743019714345,2.15096037594227,3.30567020184881,3.09983576346555,4.73077151374179,1.5256441023948,3.77592716047455,2.20204623293993,2.41584120826006,1.44015003128933,1.58005560314089,5.87903124341476,4.72470402958205,5.06691209613401,5.19177417435696,3.17890167650024,2.40390899039938,2.36303243479324,2.72609414859999,4.19137436602499,2.82313318383153,2.43644701849381,2.21287235772758,2.22066114144981,1.58711268530648,1.10992976687032,0.358855426437903,0.671538465456314,3.09103350451505,1.87682475451182,3.6630324853453,4.07299920250225,2.50786052017682,0.564751842617067,0,0,0.343706364687375,0,0.755393897389701,0,0,0,0.51776031175182,1.764384908931,2.39414924040619,2.56100408631201,4.132814190161,3.35381060204772,2.94149613520023,1.33348036680969,2.67845574410562,1.92551525755089,2.52697211763797,1.2673964994512,2.26351609663291,2.62196220915671,1.92075457214608,2.01024141344646,1.42888107384922,2.43357084484197,2.31491064556446,3.70877310722976,1.32479028120958,1.37147700954166,0.887379030796687,2.14592570952589,1.74415699958794,1.97629698872194,2.70766745253365,1.82927972872773,3.41990624869196,2.98769050460896,0.561142271657738,1.66089025373844,1.67457620038458,1.22769312950907,2.32405261778949,0.964533054905707,3.74715866906919,3.97683734357194,4.94203424311086,1.72159498861959,3.30887128679273,1.62307484934295 | |||
|short_description=p3@Smarcd2 | |||
}} | |||
Revision as of 18:31, 12 September 2013
| Short description: | p3@Smarcd2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Smarcd2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 111bp_to_ENSMUST00000021052, NM_001130187, uc007lyp.2_5end |
| EntrezGene: | Smarcd2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
