FFCP PHASE1:Mm9::chr5:53980199..53980204,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=130|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:53980199..53980204,+|id=chr5:53980199..53980204,+|ontology_enrichment_celltype=CL:0000988!9.70e-21!32;CL:0002032!9.70e-21!32;CL:0000037!9.70e-21!32;CL:0000566!9.70e-21!32;CL:0000837!9.70e-21!32;CL:0002320!4.17e-15!46;CL:0000134!4.17e-15!46;CL:0000219!6.16e-13!54;CL:0000049!1.15e-12!19;CL:0002031!8.41e-12!25;CL:0000034!2.74e-11!97;CL:0000063!3.43e-09!66;CL:0000542!4.46e-09!13;CL:0000051!4.46e-09!13;CL:0000763!8.27e-09!16;CL:0000838!4.10e-08!12;CL:0000738!5.96e-08!17;CL:0002087!5.96e-08!17;CL:0000144!8.42e-08!121;CL:0000012!8.42e-08!121;CL:0000723!2.58e-07!91;CL:0000048!2.58e-07!91;CL:0000084!6.89e-07!11;CL:0000827!6.89e-07!11|ontology_enrichment_celltype_v019_2=CL:0000049,1.54e-26,19;CL:0000988,6.69e-23,32;CL:0002032,6.69e-23,32;CL:0000037,6.69e-23,32;CL:0000837,6.69e-23,32;CL:0002320,1.39e-15,46;CL:0000134,1.39e-15,46;CL:0000763,2.92e-14,16;CL:0000219,4.29e-13,54;CL:0000034,2.05e-11,97;CL:0000764,1.34e-09,3;CL:0000765,1.34e-09,3;CL:0000038,1.34e-09,3;CL:0000547,1.34e-09,3;CL:0000557,4.06e-09,7;CL:0000945,2.05e-07,1;CL:0000236,2.05e-07,1;CL:0000826,2.05e-07,1;CL:0000815,2.74e-07,1;CL:0000792,2.74e-07,1;CL:0000723,3.08e-07,91;CL:0000048,3.08e-07,91;CL:0000050,7.19e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.34e-09,3;DOID:0060083,1.34e-09,3;DOID:1240,1.34e-09,3|ontology_enrichment_uberon=UBERON:0002384!4.17e-15!46;UBERON:0002371!6.99e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.39e-15,46|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0.174840804837995,0.333109761815663,0,0,1.10411757875383,0.548457734422955,0.84877930359606,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,8.89042942843484,3.07532393792285,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11519323715393,5.99902730993408,4.06624726633807,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0.59710280045548,6.31991868581911,9.77922047035918,6.53576048609863,0.207125772535502,0.703578179943289,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,1.5298058699447,2.09927178485487,2.48759952847963,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0,0.887943813496259,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:53980199..53980204,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:53980199..53980204,+ | |||
|id=chr5:53980199..53980204,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.70e-21!32;CL:0002032!9.70e-21!32;CL:0000037!9.70e-21!32;CL:0000566!9.70e-21!32;CL:0000837!9.70e-21!32;CL:0002320!4.17e-15!46;CL:0000134!4.17e-15!46;CL:0000219!6.16e-13!54;CL:0000049!1.15e-12!19;CL:0002031!8.41e-12!25;CL:0000034!2.74e-11!97;CL:0000063!3.43e-09!66;CL:0000542!4.46e-09!13;CL:0000051!4.46e-09!13;CL:0000763!8.27e-09!16;CL:0000838!4.10e-08!12;CL:0000738!5.96e-08!17;CL:0002087!5.96e-08!17;CL:0000144!8.42e-08!121;CL:0000012!8.42e-08!121;CL:0000723!2.58e-07!91;CL:0000048!2.58e-07!91;CL:0000084!6.89e-07!11;CL:0000827!6.89e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.54e-26,19;CL:0000988,6.69e-23,32;CL:0002032,6.69e-23,32;CL:0000037,6.69e-23,32;CL:0000837,6.69e-23,32;CL:0002320,1.39e-15,46;CL:0000134,1.39e-15,46;CL:0000763,2.92e-14,16;CL:0000219,4.29e-13,54;CL:0000034,2.05e-11,97;CL:0000764,1.34e-09,3;CL:0000765,1.34e-09,3;CL:0000038,1.34e-09,3;CL:0000547,1.34e-09,3;CL:0000557,4.06e-09,7;CL:0000945,2.05e-07,1;CL:0000236,2.05e-07,1;CL:0000826,2.05e-07,1;CL:0000815,2.74e-07,1;CL:0000792,2.74e-07,1;CL:0000723,3.08e-07,91;CL:0000048,3.08e-07,91;CL:0000050,7.19e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.34e-09,3;DOID:0060083,1.34e-09,3;DOID:1240,1.34e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.17e-15!46;UBERON:0002371!6.99e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.39e-15,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0.174840804837995,0.333109761815663,0,0,1.10411757875383,0.548457734422955,0.84877930359606,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,8.89042942843484,3.07532393792285,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.226714680320357,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11519323715393,5.99902730993408,4.06624726633807,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0.59710280045548,6.31991868581911,9.77922047035918,6.53576048609863,0.207125772535502,0.703578179943289,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,1.5298058699447,2.09927178485487,2.48759952847963,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0,0.887943813496259,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:53980199..53980204,+ | |||
}} |
Revision as of 07:46, 14 September 2013
Short description: | p@chr5:53980199..53980204, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:53980199..53980204, + |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.54e-26 | 19 |
hematopoietic cell | 6.69e-23 | 32 |
hematopoietic oligopotent progenitor cell | 6.69e-23 | 32 |
hematopoietic stem cell | 6.69e-23 | 32 |
hematopoietic multipotent progenitor cell | 6.69e-23 | 32 |
connective tissue cell | 1.39e-15 | 46 |
mesenchymal cell | 1.39e-15 | 46 |
myeloid cell | 2.92e-14 | 16 |
motile cell | 4.29e-13 | 54 |
stem cell | 2.05e-11 | 97 |
erythroid lineage cell | 1.34e-09 | 3 |
erythroblast | 1.34e-09 | 3 |
erythroid progenitor cell | 1.34e-09 | 3 |
proerythroblast | 1.34e-09 | 3 |
granulocyte monocyte progenitor cell | 4.06e-09 | 7 |
lymphocyte of B lineage | 2.05e-07 | 1 |
B cell | 2.05e-07 | 1 |
pro-B cell | 2.05e-07 | 1 |
regulatory T cell | 2.74e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.74e-07 | 1 |
somatic stem cell | 3.08e-07 | 91 |
multi fate stem cell | 3.08e-07 | 91 |
megakaryocyte-erythroid progenitor cell | 7.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.39e-15 | 46 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.34e-09 | 3 |
immune system cancer | 1.34e-09 | 3 |
leukemia | 1.34e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.