FFCP PHASE1:Mm9::chr16:17253208..17253227,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=143|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:17253208..17253227,+|id=chr16:17253208..17253227,+|ontology_enrichment_celltype=CL:0000349!4.70e-14!3;CL:0000351!4.70e-14!3;CL:0000197!8.97e-09!2;CL:0002491!8.97e-09!2;CL:0000098!8.97e-09!2|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!4.70e-14!3;UBERON:0000307!4.70e-14!3;UBERON:0002107!5.62e-11!22;UBERON:0007499!5.62e-11!22;UBERON:0006925!5.62e-11!22;UBERON:0009497!5.62e-11!22;UBERON:0000015!5.62e-11!22;UBERON:0002423!5.62e-11!22;UBERON:0006235!5.62e-11!22;UBERON:0008835!5.62e-11!22;UBERON:0003894!5.62e-11!22;UBERON:0004161!5.62e-11!22;UBERON:0008836!5.62e-11!22;UBERON:0009854!1.88e-10!23;UBERON:0009856!1.88e-10!23;UBERON:0001987!1.03e-09!2;UBERON:0003124!1.03e-09!2;UBERON:0004340!1.03e-09!2;UBERON:0002365!1.58e-09!25;UBERON:0002330!1.58e-09!25;UBERON:0003465!8.97e-09!2;UBERON:0008193!8.97e-09!2;UBERON:0000032!8.97e-09!2;UBERON:0005744!8.97e-09!2;UBERON:0008001!8.97e-09!2;UBERON:0007497!8.97e-09!2;UBERON:0009955!8.97e-09!2;UBERON:0003067!8.97e-09!2;UBERON:0002546!8.97e-09!2;UBERON:0007914!8.97e-09!2;UBERON:0003457!8.97e-09!2;UBERON:0004766!8.97e-09!2;UBERON:0005253!8.97e-09!2;UBERON:0002227!8.97e-09!2;UBERON:0001846!8.97e-09!2;UBERON:0003128!8.97e-09!2;UBERON:0002241!8.97e-09!2;UBERON:0002105!8.97e-09!2;UBERON:0001678!8.97e-09!2;UBERON:0003129!8.97e-09!2;UBERON:0001694!8.97e-09!2;UBERON:0004681!8.97e-09!2;UBERON:0001839!8.97e-09!2;UBERON:0001690!8.97e-09!2;UBERON:0001844!8.97e-09!2;UBERON:0001849!8.97e-09!2;UBERON:0002499!8.97e-09!2;UBERON:0005944!8.97e-09!2;UBERON:0001855!8.97e-09!2;UBERON:0001703!8.97e-09!2;UBERON:0003069!8.97e-09!2;UBERON:0003051!8.97e-09!2;UBERON:0004288!8.97e-09!2;UBERON:0004637!8.97e-09!2;UBERON:0004761!8.97e-09!2;UBERON:0010113!8.97e-09!2;UBERON:0003089!8.97e-09!2;UBERON:0009123!8.97e-09!2;UBERON:0009617!8.97e-09!2;UBERON:0005641!8.97e-09!2;UBERON:0005256!1.18e-08!47;UBERON:0003914!4.18e-07!47;UBERON:0005172!9.62e-07!49;UBERON:0005173!9.62e-07!49;UBERON:0002417!9.62e-07!49;UBERON:0000916!9.62e-07!49;UBERON:0005631!9.78e-07!3;UBERON:0000478!9.78e-07!3;UBERON:0000158!9.78e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,4.75e-35,2;UBERON:0003124,4.75e-35,2;UBERON:0004340,4.75e-35,2;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0005795,3.89e-18,4;UBERON:0000995,3.89e-18,4;UBERON:0003975,9.80e-15,5;UBERON:0003134,1.32e-09,8;UBERON:0004175,1.20e-08,9;UBERON:0000474,1.20e-08,9;UBERON:0003100,3.00e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667380422864376,0.196558995113203,0.674586337154561,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,1.69465656691056,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88581739386284,9.15081337416652,3.8613461763738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:17253208..17253227,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=143 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:17253208..17253227,+ | |||
|id=chr16:17253208..17253227,+ | |||
|ontology_enrichment_celltype=CL:0000349!4.70e-14!3;CL:0000351!4.70e-14!3;CL:0000197!8.97e-09!2;CL:0002491!8.97e-09!2;CL:0000098!8.97e-09!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.90e-53,3;CL:0000351,4.90e-53,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!4.70e-14!3;UBERON:0000307!4.70e-14!3;UBERON:0002107!5.62e-11!22;UBERON:0007499!5.62e-11!22;UBERON:0006925!5.62e-11!22;UBERON:0009497!5.62e-11!22;UBERON:0000015!5.62e-11!22;UBERON:0002423!5.62e-11!22;UBERON:0006235!5.62e-11!22;UBERON:0008835!5.62e-11!22;UBERON:0003894!5.62e-11!22;UBERON:0004161!5.62e-11!22;UBERON:0008836!5.62e-11!22;UBERON:0009854!1.88e-10!23;UBERON:0009856!1.88e-10!23;UBERON:0001987!1.03e-09!2;UBERON:0003124!1.03e-09!2;UBERON:0004340!1.03e-09!2;UBERON:0002365!1.58e-09!25;UBERON:0002330!1.58e-09!25;UBERON:0003465!8.97e-09!2;UBERON:0008193!8.97e-09!2;UBERON:0000032!8.97e-09!2;UBERON:0005744!8.97e-09!2;UBERON:0008001!8.97e-09!2;UBERON:0007497!8.97e-09!2;UBERON:0009955!8.97e-09!2;UBERON:0003067!8.97e-09!2;UBERON:0002546!8.97e-09!2;UBERON:0007914!8.97e-09!2;UBERON:0003457!8.97e-09!2;UBERON:0004766!8.97e-09!2;UBERON:0005253!8.97e-09!2;UBERON:0002227!8.97e-09!2;UBERON:0001846!8.97e-09!2;UBERON:0003128!8.97e-09!2;UBERON:0002241!8.97e-09!2;UBERON:0002105!8.97e-09!2;UBERON:0001678!8.97e-09!2;UBERON:0003129!8.97e-09!2;UBERON:0001694!8.97e-09!2;UBERON:0004681!8.97e-09!2;UBERON:0001839!8.97e-09!2;UBERON:0001690!8.97e-09!2;UBERON:0001844!8.97e-09!2;UBERON:0001849!8.97e-09!2;UBERON:0002499!8.97e-09!2;UBERON:0005944!8.97e-09!2;UBERON:0001855!8.97e-09!2;UBERON:0001703!8.97e-09!2;UBERON:0003069!8.97e-09!2;UBERON:0003051!8.97e-09!2;UBERON:0004288!8.97e-09!2;UBERON:0004637!8.97e-09!2;UBERON:0004761!8.97e-09!2;UBERON:0010113!8.97e-09!2;UBERON:0003089!8.97e-09!2;UBERON:0009123!8.97e-09!2;UBERON:0009617!8.97e-09!2;UBERON:0005641!8.97e-09!2;UBERON:0005256!1.18e-08!47;UBERON:0003914!4.18e-07!47;UBERON:0005172!9.62e-07!49;UBERON:0005173!9.62e-07!49;UBERON:0002417!9.62e-07!49;UBERON:0000916!9.62e-07!49;UBERON:0005631!9.78e-07!3;UBERON:0000478!9.78e-07!3;UBERON:0000158!9.78e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.90e-53,3;UBERON:0000307,4.90e-53,3;UBERON:0007010,4.90e-53,3;UBERON:0001987,4.75e-35,2;UBERON:0003124,4.75e-35,2;UBERON:0004340,4.75e-35,2;UBERON:0005631,8.72e-24,3;UBERON:0000478,8.72e-24,3;UBERON:0000158,8.72e-24,3;UBERON:0005795,3.89e-18,4;UBERON:0000995,3.89e-18,4;UBERON:0003975,9.80e-15,5;UBERON:0003134,1.32e-09,8;UBERON:0004175,1.20e-08,9;UBERON:0000474,1.20e-08,9;UBERON:0003100,3.00e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667380422864376,0.196558995113203,0.674586337154561,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,1.69465656691056,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88581739386284,9.15081337416652,3.8613461763738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:17253208..17253227,+ | |||
}} |
Revision as of 12:03, 13 September 2013
Short description: | p@chr16:17253208..17253227, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:17253208..17253227, + |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.90e-53 | 3 |
trophoblast cell | 4.90e-53 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.90e-53 | 3 |
blastula | 4.90e-53 | 3 |
cleaving embryo | 4.90e-53 | 3 |
placenta | 4.75e-35 | 2 |
chorion | 4.75e-35 | 2 |
allantois | 4.75e-35 | 2 |
extraembryonic membrane | 8.72e-24 | 3 |
extraembryonic structure | 8.72e-24 | 3 |
membranous layer | 8.72e-24 | 3 |
embryonic uterus | 3.89e-18 | 4 |
uterus | 3.89e-18 | 4 |
internal female genitalia | 9.80e-15 | 5 |
female reproductive organ | 1.32e-09 | 8 |
internal genitalia | 1.20e-08 | 9 |
female reproductive system | 1.20e-08 | 9 |
female organism | 3.00e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.