FFCP PHASE1:Mm9::chr9:53345126..53345179,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=244879|HGNC=|MCL_coexpression_id=1134|UniProt=Q8BMA5|association_with_transcript=0bp_to_ENSMUST00000035850,NM_001081152,uc009pmf.1_5end|description=CAGE_peak_1_at_Npat_5end|id=chr9:53345126..53345179,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!2.79e-10!147;UBERON:0004177!5.40e-09!29;UBERON:0002370!5.25e-07!23;UBERON:0000974!5.25e-07!23;UBERON:0004807!5.25e-07!23;UBERON:0005058!5.25e-07!23;UBERON:0003351!5.25e-07!23;UBERON:0009113!5.25e-07!23;UBERON:0003295!5.25e-07!23;UBERON:0009722!5.25e-07!23;UBERON:0005562!5.25e-07!23;UBERON:0007690!5.25e-07!23;UBERON:0000065!6.18e-07!41;UBERON:0001004!9.50e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.86e-11,134;UBERON:0000153,1.80e-09,43;UBERON:0004177,5.40e-09,29;UBERON:0005057,5.40e-09,29;UBERON:0000077,6.72e-09,35;UBERON:0007811,3.56e-07,36;UBERON:0002370,5.25e-07,23;UBERON:0000974,5.25e-07,23;UBERON:0004807,5.25e-07,23;UBERON:0005058,5.25e-07,23;UBERON:0003351,5.25e-07,23;UBERON:0009113,5.25e-07,23;UBERON:0003295,5.25e-07,23;UBERON:0009722,5.25e-07,23;UBERON:0005562,5.25e-07,23;UBERON:0007690,5.25e-07,23;UBERON:0000065,6.18e-07,41;UBERON:0001004,9.50e-07,42|phase1_expression=16.1750335575842,3.48975407639361,5.0049916332849,4.53696316960245,5.50985302940982,9.56911849897772,8.1764424208434,15.236552166106,32.2406173727317,36.280001579909,24.3129514880217,24.888913606545,19.6880839420887,20.6312149708834,21.3190247562024,32.3960427823721,33.578970150151,18.2968055907778,19.6073640056206,13.1560792057389,15.1377056468904,20.5532268985833,17.7615856614476,7.83962871687693,5.96464130774642,5.16808767703518,4.73838195774982,6.03319451520489,4.56056206695297,11.3413558391969,5.76499327703792,11.4305521222734,9.22597181376855,0,10.1098066912946,12.3013637565284,12.6585000882669,9.62622750694888,2.3440060335714,10.9939986234498,11.1763982725893,8.87959130445979,7.2826552954673,13.09326906946,13.3817549209759,18.1711284640065,7.04152209913235,4.36050312760893,1.97717564461025,5.05517737593137,2.93971485413261,1.43752564364972,20.4694779390438,19.5847778343063,28.231879127967,9.26133969729409,10.3152038377952,9.28209766099396,5.26022798234954,4.23192783417626,8.23980824558033,3.04960078862219,0,1.3498495759221,2.96659908770092,2.1314403448383,1.79760066311043,4.2264013585371,12.6501327016343,5.53524347159932,9.04397333810943,3.99911378165325,5.30084498283872,10.4117179332711,7.66763768145891,7.35375029288017,19.82085857989,15.8332299225633,17.050325191443,5.14356522147756,6.49562269577109,7.8137005583514,11.1673199600552,14.069065250792,15.1270265299042,13.258286346315,11.2473627831291,7.26957838718672,14.9180600866373,22.8226111522492,25.5080750057476,9.46466264679525,8.83962733820076,2.15881276655127,8.4470934268197,3.58421509677868,11.0951091904084,12.1005529030421,7.53379413348319,7.42013106471715,17.8871143116384,19.2489716121477,7.64415719119937,14.2213340630666,11.9070072556168,11.9079136773296,11.62706223534,12.3318590096585,40.653247732606,14.6957717674177,17.3485326766136,12.1786191324856,15.912469310668,13.1128697280782,21.8714995272411,10.053327306374,18.2924276123437,16.33972733195,36.2690326299448,15.2060838950565,20.0965781798958,20.3647606316793,14.9113408974498,26.6430525280508,20.1068838540917,13.0283098156382,28.9952601304327,16.7972764678154,29.3532224538779,23.9665023047716,20.1300265240196,15.2041766056566,18.251553620189,19.6900902144355,19.7398642331582,21.9025705141473,22.8120175024708,20.029522268225,10.867078612648,18.0979996062368,21.7301139747715,15.8632452059096,27.5495058602184,19.4409215008072,26.1260156741099,25.4946303366851,22.6758173434544,21.7310831420773,23.281343236747,34.9846248310466,30.4395444803631,20.1660073833369,25.8583941779806,26.4671646556847,22.0186885956499,21.6947350832158,18.9597560574573,19.5584409407184,15.0606654679664,21.3339545711567,20.8728193383176,19.0865785148676,20.5967919959133,20.0699516382352,20.0547246753592,19.5328513590343,19.8522317035718,18.6824547787471,16.2914251414346,14.6109043030395,15.6462802423502,12.2807989437279,14.9294078397914,15.165325319922,20.1878350621562,17.3908794920991,6.60837565967596,10.8424732332053,23.0351310578053,24.8493238890669,26.4178295710291,21.781820659321,19.3468898145037,16.1691782195675,9.01605216934572,13.0112174231969,12.8180956488137,13.7279965708394,15.2071987952914,9.88701349519644,12.9682829924817,12.9441827615339,9.48339504765408,26.3914064128474,22.5415471346161,24.641810669283,21.3347735884388,22.8642772842439,18.6547784516559,17.4179974615931,15.071877872772,10.9823475890402,8.59712618552732,39.7091351604304,32.2356751985653,33.5044547453432,27.5889765088364,27.7353733715279,22.9163266603278,22.1526025837124,23.6717431091552,19.2192989231657,12.9391385874619,14.5134969590716,14.0416952901552,10.8608917517258,12.9166137735777,11.5786445127208,21.8008764396594,20.0860896476714,29.4966607360067,23.594566922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| ||
|EntrezGene=244879 | |||
|HGNC= | |||
|MCL_coexpression_id=1134 | |||
|UniProt=Q8BMA5 | |||
|association_with_transcript=0bp_to_ENSMUST00000035850,NM_001081152,uc009pmf.1_5end | |||
|description=CAGE_peak_1_at_Npat_5end | |||
|id=chr9:53345126..53345179,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!2.79e-10!147;UBERON:0004177!5.40e-09!29;UBERON:0002370!5.25e-07!23;UBERON:0000974!5.25e-07!23;UBERON:0004807!5.25e-07!23;UBERON:0005058!5.25e-07!23;UBERON:0003351!5.25e-07!23;UBERON:0009113!5.25e-07!23;UBERON:0003295!5.25e-07!23;UBERON:0009722!5.25e-07!23;UBERON:0005562!5.25e-07!23;UBERON:0007690!5.25e-07!23;UBERON:0000065!6.18e-07!41;UBERON:0001004!9.50e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.86e-11,134;UBERON:0000153,1.80e-09,43;UBERON:0004177,5.40e-09,29;UBERON:0005057,5.40e-09,29;UBERON:0000077,6.72e-09,35;UBERON:0007811,3.56e-07,36;UBERON:0002370,5.25e-07,23;UBERON:0000974,5.25e-07,23;UBERON:0004807,5.25e-07,23;UBERON:0005058,5.25e-07,23;UBERON:0003351,5.25e-07,23;UBERON:0009113,5.25e-07,23;UBERON:0003295,5.25e-07,23;UBERON:0009722,5.25e-07,23;UBERON:0005562,5.25e-07,23;UBERON:0007690,5.25e-07,23;UBERON:0000065,6.18e-07,41;UBERON:0001004,9.50e-07,42 | |||
|phase1_expression=16.1750335575842,3.48975407639361,5.0049916332849,4.53696316960245,5.50985302940982,9.56911849897772,8.1764424208434,15.236552166106,32.2406173727317,36.280001579909,24.3129514880217,24.888913606545,19.6880839420887,20.6312149708834,21.3190247562024,32.3960427823721,33.578970150151,18.2968055907778,19.6073640056206,13.1560792057389,15.1377056468904,20.5532268985833,17.7615856614476,7.83962871687693,5.96464130774642,5.16808767703518,4.73838195774982,6.03319451520489,4.56056206695297,11.3413558391969,5.76499327703792,11.4305521222734,9.22597181376855,0,10.1098066912946,12.3013637565284,12.6585000882669,9.62622750694888,2.3440060335714,10.9939986234498,11.1763982725893,8.87959130445979,7.2826552954673,13.09326906946,13.3817549209759,18.1711284640065,7.04152209913235,4.36050312760893,1.97717564461025,5.05517737593137,2.93971485413261,1.43752564364972,20.4694779390438,19.5847778343063,28.231879127967,9.26133969729409,10.3152038377952,9.28209766099396,5.26022798234954,4.23192783417626,8.23980824558033,3.04960078862219,0,1.3498495759221,2.96659908770092,2.1314403448383,1.79760066311043,4.2264013585371,12.6501327016343,5.53524347159932,9.04397333810943,3.99911378165325,5.30084498283872,10.4117179332711,7.66763768145891,7.35375029288017,19.82085857989,15.8332299225633,17.050325191443,5.14356522147756,6.49562269577109,7.8137005583514,11.1673199600552,14.069065250792,15.1270265299042,13.258286346315,11.2473627831291,7.26957838718672,14.9180600866373,22.8226111522492,25.5080750057476,9.46466264679525,8.83962733820076,2.15881276655127,8.4470934268197,3.58421509677868,11.0951091904084,12.1005529030421,7.53379413348319,7.42013106471715,17.8871143116384,19.2489716121477,7.64415719119937,14.2213340630666,11.9070072556168,11.9079136773296,11.62706223534,12.3318590096585,40.653247732606,14.6957717674177,17.3485326766136,12.1786191324856,15.912469310668,13.1128697280782,21.8714995272411,10.053327306374,18.2924276123437,16.33972733195,36.2690326299448,15.2060838950565,20.0965781798958,20.3647606316793,14.9113408974498,26.6430525280508,20.1068838540917,13.0283098156382,28.9952601304327,16.7972764678154,29.3532224538779,23.9665023047716,20.1300265240196,15.2041766056566,18.251553620189,19.6900902144355,19.7398642331582,21.9025705141473,22.8120175024708,20.029522268225,10.867078612648,18.0979996062368,21.7301139747715,15.8632452059096,27.5495058602184,19.4409215008072,26.1260156741099,25.4946303366851,22.6758173434544,21.7310831420773,23.281343236747,34.9846248310466,30.4395444803631,20.1660073833369,25.8583941779806,26.4671646556847,22.0186885956499,21.6947350832158,18.9597560574573,19.5584409407184,15.0606654679664,21.3339545711567,20.8728193383176,19.0865785148676,20.5967919959133,20.0699516382352,20.0547246753592,19.5328513590343,19.8522317035718,18.6824547787471,16.2914251414346,14.6109043030395,15.6462802423502,12.2807989437279,14.9294078397914,15.165325319922,20.1878350621562,17.3908794920991,6.60837565967596,10.8424732332053,23.0351310578053,24.8493238890669,26.4178295710291,21.781820659321,19.3468898145037,16.1691782195675,9.01605216934572,13.0112174231969,12.8180956488137,13.7279965708394,15.2071987952914,9.88701349519644,12.9682829924817,12.9441827615339,9.48339504765408,26.3914064128474,22.5415471346161,24.641810669283,21.3347735884388,22.8642772842439,18.6547784516559,17.4179974615931,15.071877872772,10.9823475890402,8.59712618552732,39.7091351604304,32.2356751985653,33.5044547453432,27.5889765088364,27.7353733715279,22.9163266603278,22.1526025837124,23.6717431091552,19.2192989231657,12.9391385874619,14.5134969590716,14.0416952901552,10.8608917517258,12.9166137735777,11.5786445127208,21.8008764396594,20.0860896476714,29.4966607360067,23.5945669227512,27.4587590497547,26.9685074481323,22.1380586023993,22.4403695036469,21.1231093102296,21.4820748959312,19.7723913135284,16.2224681568581,17.4411831684555,16.9239398540369,9.04747703635634,9.79030230873677,12.7858710984949,12.1412168374082,25.2064426280833,24.4972424977705,14.4262751931474,10.0988370881749,23.347608236803,17.1793047490521,15.2950612390287,27.0034741686384,20.943075363745,19.2492040936406,19.02610297872,22.503701059171,22.9266911208984,27.6336332122754,18.7360912474915,12.1084610493734,25.0845917404507,21.2811458634571,15.9294166007955,19.4224508923985,12.6975893925195,15.8428266994954,12.4026795009925,13.5271465095328,18.3484088149437,18.1766864738753,19.9638531895444,12.9575070753685,14.7586052004998,11.3449097573006,32.3417625466099,21.7873923777885,6.07985813778946,15.4322665222746,24.1182717753492,16.4099312193905,13.9866667511803,9.74287837166718,22.7631556821799,24.784352291067,11.2469483008031,15.6641940294406,29.5479900853507,25.934557719107,20.1739261365301,18.3837807714469,8.74442509889552,27.4429446975554,22.7258271461144,18.7812049846532,26.2976228864991,34.2830591748538,38.274383761887,24.4792645330979,28.8963330989554,33.5883485576779,31.9241939488219,15.2747298882418,27.0467274511871,31.9211563389152,23.8691803216181,19.863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| |||
|short_description=p1@Npat | |||
}} |
Revision as of 18:13, 14 September 2013
Short description: | p1@Npat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Npat_5end |
Coexpression cluster: | MCL_coexpression_mm9:1134 |
Association with transcript: | 0bp_to_ENSMUST00000035850, NM_001081152, uc009pmf.1_5end |
EntrezGene: | Npat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 2.86e-11 | 134 |
anterior region of body | 1.80e-09 | 43 |
hemopoietic organ | 5.40e-09 | 29 |
immune organ | 5.40e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 6.72e-09 | 35 |
craniocervical region | 3.56e-07 | 36 |
thymus | 5.25e-07 | 23 |
neck | 5.25e-07 | 23 |
respiratory system epithelium | 5.25e-07 | 23 |
hemolymphoid system gland | 5.25e-07 | 23 |
pharyngeal epithelium | 5.25e-07 | 23 |
thymic region | 5.25e-07 | 23 |
pharyngeal gland | 5.25e-07 | 23 |
entire pharyngeal arch endoderm | 5.25e-07 | 23 |
thymus primordium | 5.25e-07 | 23 |
early pharyngeal endoderm | 5.25e-07 | 23 |
respiratory tract | 6.18e-07 | 41 |
respiratory system | 9.50e-07 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.