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FFCP PHASE1:Mm9::chr13:51195842..51195861,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20729|HGNC=|MCL_coexpression_id=1|UniProt=Q61142|association_with_transcript=-405bp_to_ENSMUST00000057478,NM_146043,uc007qly.1_5end|description=CAGE_peak_5_at_Spin1_5end|id=chr13:51195842..51195861,+|ontology_enrichment_celltype=CL:0000117!3.59e-07!23;CL:0000337!3.59e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-07,23;CL:0000337,1.18e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.06e-14!52;UBERON:0005068!9.06e-14!52;UBERON:0006241!9.06e-14!52;UBERON:0007135!9.06e-14!52;UBERON:0000955!2.29e-12!50;UBERON:0006238!2.29e-12!50;UBERON:0002616!4.13e-12!49;UBERON:0000033!1.18e-11!63;UBERON:0003080!1.44e-10!40;UBERON:0002780!4.20e-10!39;UBERON:0001890!4.20e-10!39;UBERON:0006240!4.20e-10!39;UBERON:0002020!1.41e-09!34;UBERON:0001017!4.34e-09!73;UBERON:0005743!4.34e-09!73;UBERON:0003056!8.22e-09!49;UBERON:0000073!4.01e-08!75;UBERON:0001016!4.01e-08!75;UBERON:0002021!7.65e-08!10;UBERON:0000411!7.65e-08!10;UBERON:0001950!7.65e-08!10;UBERON:0000468!2.04e-07!333;UBERON:0002346!2.09e-07!71;UBERON:0003075!2.09e-07!71;UBERON:0007284!2.09e-07!71;UBERON:0004121!2.28e-07!102;UBERON:0000924!2.28e-07!102;UBERON:0006601!2.28e-07!102;UBERON:0007023!2.41e-07!51;UBERON:0002791!3.99e-07!29;UBERON:0003528!3.99e-07!29;UBERON:0001893!3.99e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.53e-18,54;UBERON:0001049,1.14e-16,52;UBERON:0005068,1.14e-16,52;UBERON:0006241,1.14e-16,52;UBERON:0007135,1.14e-16,52;UBERON:0001017,1.01e-13,73;UBERON:0004121,1.70e-13,95;UBERON:0000924,1.70e-13,95;UBERON:0006601,1.70e-13,95;UBERON:0000955,5.06e-13,47;UBERON:0006238,5.06e-13,47;UBERON:0001016,6.71e-13,75;UBERON:0010371,7.91e-13,73;UBERON:0002616,1.09e-12,46;UBERON:0002346,1.27e-12,64;UBERON:0003075,1.27e-12,64;UBERON:0007284,1.27e-12,64;UBERON:0003080,1.30e-11,40;UBERON:0002780,5.12e-11,39;UBERON:0001890,5.12e-11,39;UBERON:0006240,5.12e-11,39;UBERON:0002020,9.88e-11,34;UBERON:0002021,4.69e-10,10;UBERON:0000411,4.69e-10,10;UBERON:0001950,4.69e-10,10;UBERON:0003056,2.71e-09,49;UBERON:0007023,1.29e-08,51;UBERON:0011216,4.81e-08,194;UBERON:0003528,1.31e-07,29;UBERON:0002791,1.31e-07,29;UBERON:0001893,1.31e-07,29|phase1_expression=0.640595388419176,1.04692622291808,0,1.51232105653415,3.00537437967808,2.01455126294268,0.700837921786577,0,0,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0.765389611359628,0,0,2.07990149631429,0.68822784320151,0,1.29228598847722,1.07735616342945,1.90023419456374,1.76421090831952,1.77384408524244,0,0,0,2.3108129580102,1.66234645358492,2.45003227514843,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,4.04632921719196,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.210324961351382,2.85650984403804,2.87129103237098,0.734944795289724,0.287536413054709,0.919218786610021,7.70811166995721,2.42605942361857,1.99688493233117,2.63772575460388,2.74462930807229,4.68822033501084,3.07101298901519,2.25105044012672,1.5279824777681,5.30331453852602,3.27454865837937,3.91438836233131,0,0,1.15945795480671,0,0.679971333707751,0.539703191637817,0.649776417447669,3.13618820968135,0.842666520790511,0,0,0,1.83096445709685,0,0,0,2.16491041011214,1.77351905832569,2.52762222507392,1.02765491747154,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,1.97755974187499,0,0,0,0,0,0,2.04946557908083,2.30391377494801,2.29911349687732,0,0,0.127070227073065,2.99581278809645,2.74500361691176,4.77486538028885,5.04090528557602,6.13717097592793,3.32460871295296,3.56930778749067,0.81471491080253,0.995255764880744,3.79084137650512,2.31486041475121,0.130120442962704,0.229902104433473,0,0,0.748401490664606,0.768682321709099,0.468508622798644,3.10444044886819,0.431135985865684,0.378212160335639,0.527853372491847,1.31517439456545,0.834141747676794,0.696504333044333,1.4404749548556,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,0.823236899034275,2.97376904685418,1.58670339998127,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.667134131534611,1.71203063501303,1.42358718463353,1.97638745668813,1.50801125280162,0.994782360205754,1.9496408711912,0.898819408654221,1.72910439899755,1.7922714592893,0.189667900953082,0.799739588268102,2.25415471346161,1.22190796707189,0.387904974335251,0.771494018793504,1.70738650235495,1.62371162777562,1.8839847340965,2.34454611451421,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,0,1.24815069245824,0.757736633841335,0.358794827043824,1.4473305640901,1.29327233116623,0.189491411770485,0.325929952884052,0.678980343100753,1.40814148973101,0.502518772325447,0.714130922658041,1.36593553500459,0.945810864637146,0.8858587585951,1.43509291791738,0.655453258862952,1.03610989119537,0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|EntrezGene=20729
|HGNC=
|MCL_coexpression_id=1
|UniProt=Q61142
|association_with_transcript=-405bp_to_ENSMUST00000057478,NM_146043,uc007qly.1_5end
|description=CAGE_peak_5_at_Spin1_5end
|id=chr13:51195842..51195861,+
|ontology_enrichment_celltype=CL:0000117!3.59e-07!23;CL:0000337!3.59e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-07,23;CL:0000337,1.18e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!9.06e-14!52;UBERON:0005068!9.06e-14!52;UBERON:0006241!9.06e-14!52;UBERON:0007135!9.06e-14!52;UBERON:0000955!2.29e-12!50;UBERON:0006238!2.29e-12!50;UBERON:0002616!4.13e-12!49;UBERON:0000033!1.18e-11!63;UBERON:0003080!1.44e-10!40;UBERON:0002780!4.20e-10!39;UBERON:0001890!4.20e-10!39;UBERON:0006240!4.20e-10!39;UBERON:0002020!1.41e-09!34;UBERON:0001017!4.34e-09!73;UBERON:0005743!4.34e-09!73;UBERON:0003056!8.22e-09!49;UBERON:0000073!4.01e-08!75;UBERON:0001016!4.01e-08!75;UBERON:0002021!7.65e-08!10;UBERON:0000411!7.65e-08!10;UBERON:0001950!7.65e-08!10;UBERON:0000468!2.04e-07!333;UBERON:0002346!2.09e-07!71;UBERON:0003075!2.09e-07!71;UBERON:0007284!2.09e-07!71;UBERON:0004121!2.28e-07!102;UBERON:0000924!2.28e-07!102;UBERON:0006601!2.28e-07!102;UBERON:0007023!2.41e-07!51;UBERON:0002791!3.99e-07!29;UBERON:0003528!3.99e-07!29;UBERON:0001893!3.99e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.53e-18,54;UBERON:0001049,1.14e-16,52;UBERON:0005068,1.14e-16,52;UBERON:0006241,1.14e-16,52;UBERON:0007135,1.14e-16,52;UBERON:0001017,1.01e-13,73;UBERON:0004121,1.70e-13,95;UBERON:0000924,1.70e-13,95;UBERON:0006601,1.70e-13,95;UBERON:0000955,5.06e-13,47;UBERON:0006238,5.06e-13,47;UBERON:0001016,6.71e-13,75;UBERON:0010371,7.91e-13,73;UBERON:0002616,1.09e-12,46;UBERON:0002346,1.27e-12,64;UBERON:0003075,1.27e-12,64;UBERON:0007284,1.27e-12,64;UBERON:0003080,1.30e-11,40;UBERON:0002780,5.12e-11,39;UBERON:0001890,5.12e-11,39;UBERON:0006240,5.12e-11,39;UBERON:0002020,9.88e-11,34;UBERON:0002021,4.69e-10,10;UBERON:0000411,4.69e-10,10;UBERON:0001950,4.69e-10,10;UBERON:0003056,2.71e-09,49;UBERON:0007023,1.29e-08,51;UBERON:0011216,4.81e-08,194;UBERON:0003528,1.31e-07,29;UBERON:0002791,1.31e-07,29;UBERON:0001893,1.31e-07,29
|phase1_expression=0.640595388419176,1.04692622291808,0,1.51232105653415,3.00537437967808,2.01455126294268,0.700837921786577,0,0,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0.765389611359628,0,0,2.07990149631429,0.68822784320151,0,1.29228598847722,1.07735616342945,1.90023419456374,1.76421090831952,1.77384408524244,0,0,0,2.3108129580102,1.66234645358492,2.45003227514843,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,4.04632921719196,4.23192783417626,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.540023753326763,0.210324961351382,2.85650984403804,2.87129103237098,0.734944795289724,0.287536413054709,0.919218786610021,7.70811166995721,2.42605942361857,1.99688493233117,2.63772575460388,2.74462930807229,4.68822033501084,3.07101298901519,2.25105044012672,1.5279824777681,5.30331453852602,3.27454865837937,3.91438836233131,0,0,1.15945795480671,0,0.679971333707751,0.539703191637817,0.649776417447669,3.13618820968135,0.842666520790511,0,0,0,1.83096445709685,0,0,0,2.16491041011214,1.77351905832569,2.52762222507392,1.02765491747154,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,1.97755974187499,0,0,0,0,0,0,2.04946557908083,2.30391377494801,2.29911349687732,0,0,0.127070227073065,2.99581278809645,2.74500361691176,4.77486538028885,5.04090528557602,6.13717097592793,3.32460871295296,3.56930778749067,0.81471491080253,0.995255764880744,3.79084137650512,2.31486041475121,0.130120442962704,0.229902104433473,0,0,0.748401490664606,0.768682321709099,0.468508622798644,3.10444044886819,0.431135985865684,0.378212160335639,0.527853372491847,1.31517439456545,0.834141747676794,0.696504333044333,1.4404749548556,0.995171334092466,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,0.823236899034275,2.97376904685418,1.58670339998127,0.426576501070468,0.696710015581316,0.257734922644187,0.403367049246685,0.667134131534611,1.71203063501303,1.42358718463353,1.97638745668813,1.50801125280162,0.994782360205754,1.9496408711912,0.898819408654221,1.72910439899755,1.7922714592893,0.189667900953082,0.799739588268102,2.25415471346161,1.22190796707189,0.387904974335251,0.771494018793504,1.70738650235495,1.62371162777562,1.8839847340965,2.34454611451421,0.296452627087149,0,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,0,1.24815069245824,0.757736633841335,0.358794827043824,1.4473305640901,1.29327233116623,0.189491411770485,0.325929952884052,0.678980343100753,1.40814148973101,0.502518772325447,0.714130922658041,1.36593553500459,0.945810864637146,0.8858587585951,1.43509291791738,0.655453258862952,1.03610989119537,0.433947175744535,0,0,1.96705709207614,3.03530420935206,2.40825884981688,4.57125577709592,0,0,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,1.60660658210904,0.567760340833074,0.534196811001766,0.488660878060728,1.64970122972535,1.32745138339963,0.971122544619926,0.302323556964751,0.565815239267694,1.18120757152309,2.45948118355142,1.55056975900933,0.727067458955011,1.42598951353889,1.8962205476149,3.16255825724996,3.09406629744561,5.10659408630682,0.720244376125241,1.03486947026204,1.71469628025274,2.48276327099183,1.96205699362278,1.97458824722545,1.2178597964584,0.23467170806371,2.54198485036584,5.07215315526412,0.32977250588296,1.45317984026315,0.844380948994182,1.19372344003136,0.656563598980245,1.7488850197791,2.59595422814714,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,0.954670618015114,0.316335993581135,0.406638934253697,1.08005340821801,0.836353184057875,0.436725127492355,0.809186078308924,1.23980183588004,1.83229159388821,1.03691978633434,4.97071450469541,0.56369293868419,0.149516546043979,0.66183396182839,0.583353565032143,0.645799117388655,0.506868376472335,0.469428954583016,0.5208175393758,0.629156066554265,0.483168241652012,0,0,0.608175645870493,0.513554785824136,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.302899349844443,0.15241361331,0.302478555410522,0.292373642219257,0,0.116876902181569,1.58711268530648,0.443971906748129,0.62799699626633,1.34307693091263,0.579568782096571,0.563047426353546,0.915758121336325,2.14368379079066,5.517293144389,6.21227026878773,3.22227665555024,7.44764167471216,3.43706364687375,8.22099023724771,7.55393897389701,4.05013500139084,4.95353323546643,4.53142408984205,5.69536342927002,0.103787347584177,0.399024873401031,0.853668028770671,0.486213434136588,1.04806581313991,0.919217542250071,1.11123363900808,1.03017528619447,1.60459604795908,1.01078884705519,1.01391719956096,0.943131706930381,0.842773567228942,0.89635213366817,0.631790158511746,0,0.463537303779422,0.38581844092741,1.23625770240992,1.17759136107518,1.37147700954166,0.532427418478012,0.476872379894642,1.16277133305863,0.376437521661322,0.846146078916765,0.73171189149109,0.526139422875686,0.679020569229309,1.68342681497322,0.949080144993393,0.492522411877817,0,1.23949472948773,0.385813221962283,2.49810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0.220591419119515,0.463735671240843
|short_description=p5@Spin1
}}

Revision as of 00:43, 13 September 2013

Short description:p5@Spin1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Spin1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -405bp_to_ENSMUST00000057478, NM_146043, uc007qly.1_5end
EntrezGene:Spin1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Spin1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.18e-0723
neuroblast (sensu Vertebrata)1.18e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.53e-1854
neural tube1.14e-1652
neural rod1.14e-1652
future spinal cord1.14e-1652
neural keel1.14e-1652
central nervous system1.01e-1373
ectoderm-derived structure1.70e-1395
ectoderm1.70e-1395
presumptive ectoderm1.70e-1395
brain5.06e-1347
future brain5.06e-1347
nervous system6.71e-1375
ecto-epithelium7.91e-1373
regional part of brain1.09e-1246
neurectoderm1.27e-1264
neural plate1.27e-1264
presumptive neural plate1.27e-1264
anterior neural tube1.30e-1140
regional part of forebrain5.12e-1139
forebrain5.12e-1139
future forebrain5.12e-1139
gray matter9.88e-1134
occipital lobe4.69e-1010
visual cortex4.69e-1010
neocortex4.69e-1010
pre-chordal neural plate2.71e-0949
adult organism1.29e-0851
organ system subdivision4.81e-08194
brain grey matter1.31e-0729
regional part of telencephalon1.31e-0729
telencephalon1.31e-0729







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