FFCP PHASE1:Mm9::chr4:126991224..126991242,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14612|HGNC=|MCL_coexpression_id=94|UniProt=P28235,Q3UPZ2|association_with_transcript=-2bp_to_NM_008120,uc008uur.1_5end|description=CAGE_peak_1_at_Gja4_5end|id=chr4:126991224..126991242,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.86e-09!14;UBERON:0000117!1.86e-09!14;UBERON:0000171!1.86e-09!14;UBERON:0000170!1.86e-09!14;UBERON:0005597!1.86e-09!14;UBERON:0000118!1.86e-09!14;UBERON:0007100!3.72e-09!18;UBERON:0000948!3.72e-09!18;UBERON:0005498!3.72e-09!18;UBERON:0004140!3.72e-09!18;UBERON:0009881!3.72e-09!18;UBERON:0004141!3.72e-09!18;UBERON:0003084!3.72e-09!18;UBERON:0007005!3.72e-09!18;UBERON:0004139!3.72e-09!18;UBERON:0004291!3.72e-09!18;UBERON:0005153!8.05e-08!17;UBERON:0003103!1.77e-07!43;UBERON:0005177!3.23e-07!85;UBERON:0000468!3.67e-07!333;UBERON:0004535!6.06e-07!23;UBERON:0001009!6.06e-07!23;UBERON:0004872!6.17e-07!33;UBERON:0000479!9.05e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.60e-09,14;UBERON:0000117,1.60e-09,14;UBERON:0000171,1.60e-09,14;UBERON:0000170,1.60e-09,14;UBERON:0005597,1.60e-09,14;UBERON:0000118,1.60e-09,14;UBERON:0007100,3.22e-09,18;UBERON:0000948,3.22e-09,18;UBERON:0005498,3.22e-09,18;UBERON:0004140,3.22e-09,18;UBERON:0009881,3.22e-09,18;UBERON:0004141,3.22e-09,18;UBERON:0003084,3.22e-09,18;UBERON:0007005,3.22e-09,18;UBERON:0004139,3.22e-09,18;UBERON:0004291,3.22e-09,18;UBERON:0005153,7.14e-08,17;UBERON:0003103,1.17e-07,43;UBERON:0004535,5.23e-07,23;UBERON:0001009,5.23e-07,23;UBERON:0004872,5.37e-07,33;UBERON:0000479,5.45e-07,349;UBERON:0005177,7.37e-07,79|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,9.52484849691981,0.0992909512008853,0,0.799962113967033,0.91763712426868,0.57423196411502,0,0.646413698057667,0.190023419456374,0,0.665191531965914,3.81018404075779,11.6862309641068,15.8481681015439,0,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0,3.9119567217402,0.436050312760893,0,0.388859798148567,5.03951117851305,1.43752564364972,0,0,0,5.91696702882678,15.4728057566929,13.9231464914909,10.1158230429799,9.52183762689659,15.2119536841483,37.2728985276045,6.22506357277798,0,0,0,0,0.768436610643109,9.7468235569969,9.72042755988173,9.88527318351495,11.1403883917483,15.2399293256613,5.02212276781312,6.13411014516713,11.0306254393203,4.40463523997555,5.61824287574826,3.22573719838111,10.5509030184155,11.3444678066988,9.89735404057844,7.53794097303729,4.50210088025344,5.04234217663473,12.0797720044204,10.2507610175354,13.4207600994216,1.59025005999687,4.76100828672749,141.453870486419,55.0671281268087,2.03991400112325,1.07940638327563,1.94932925234301,3.13618820968135,7.72444310724635,0,0,0,0.14084341977668,0,0,0,0,0,0,11.1900202124679,8.54495016035667,9.94562331734326,14.7462527751215,20.3991870469135,11.5307748628029,14.3186508524991,10.347806227942,9.04799457573663,35.5960753537498,14.8937337627509,1.76922110389975,15.2060838950565,10.1587098491781,9.69750506270444,3.72783522436244,3.51336956413857,4.39838084308256,3.83185582812887,0,0,0,5.54225365797844,1.37250180845588,4.02093926761166,1.91206752211504,5.62574006126727,2.90903262383384,6.00292673350703,16.9053343991525,10.9478134136882,4.54900965180614,2.10441855886474,9.23855145035196,8.27647575960503,7.74267158163002,7.83665052745718,5.30684693380357,4.74020765053944,7.12133106653939,5.17406741478031,8.40715172438085,6.99692496620931,9.67731182901719,12.9325482132269,9.73165372289593,16.3678518265418,18.108828003899,12.7381930763836,0,0,0,33.7615009232868,33.5372265772968,28.6298677723014,31.0135603616625,26.5631712858995,29.0022172228271,23.4859284197912,29.7783475553577,25.5716099784101,18.4307031903098,26.1026267885761,23.4288859587523,21.6375981389492,18.8813099150304,26.8412837520744,3.57492912559016,5.76265829323993,0,3.70230793328962,17.9162130449597,16.2565670302307,14.6908905907186,10.2858597557905,10.4517680607089,15.2180500890047,3.79623249235609,12.1877226495768,16.0854533632172,16.7123436514567,15.0122347081723,3.59527763461689,5.83572734661674,5.17767310461355,21.0531370057921,15.7662947401426,12.3978509240388,18.7359221617689,17.4557238450863,14.1674356178443,11.6987593679876,7.23289725100051,8.79192875911699,10.9823475890402,13.6368208460088,3.33690211432188,6.2898878436225,2.47348323623339,2.02860121388503,4.82354319504834,8.14802725700543,8.0554918486227,4.05338066937588,4.94210543738547,5.75072826109418,14.5134969590716,9.04909252032226,6.81962970457202,7.3552939543984,7.23665282045051,60.5990463746463,24.8233749419335,13.2001630918041,18.8417045210459,19.4792906079457,36.0138453499904,47.8467718180888,57.9546934137663,70.3052742713612,70.868700687608,74.1464674257315,67.8394122923155,74.0818572204692,107.329601467482,0,0,9.34352118736169,7.72622889653251,4.17431533968259,8.32202974804643,0,23.7322671572111,0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| ||
|EntrezGene=14612 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|UniProt=P28235,Q3UPZ2 | |||
|association_with_transcript=-2bp_to_NM_008120,uc008uur.1_5end | |||
|description=CAGE_peak_1_at_Gja4_5end | |||
|id=chr4:126991224..126991242,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.86e-09!14;UBERON:0000117!1.86e-09!14;UBERON:0000171!1.86e-09!14;UBERON:0000170!1.86e-09!14;UBERON:0005597!1.86e-09!14;UBERON:0000118!1.86e-09!14;UBERON:0007100!3.72e-09!18;UBERON:0000948!3.72e-09!18;UBERON:0005498!3.72e-09!18;UBERON:0004140!3.72e-09!18;UBERON:0009881!3.72e-09!18;UBERON:0004141!3.72e-09!18;UBERON:0003084!3.72e-09!18;UBERON:0007005!3.72e-09!18;UBERON:0004139!3.72e-09!18;UBERON:0004291!3.72e-09!18;UBERON:0005153!8.05e-08!17;UBERON:0003103!1.77e-07!43;UBERON:0005177!3.23e-07!85;UBERON:0000468!3.67e-07!333;UBERON:0004535!6.06e-07!23;UBERON:0001009!6.06e-07!23;UBERON:0004872!6.17e-07!33;UBERON:0000479!9.05e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.60e-09,14;UBERON:0000117,1.60e-09,14;UBERON:0000171,1.60e-09,14;UBERON:0000170,1.60e-09,14;UBERON:0005597,1.60e-09,14;UBERON:0000118,1.60e-09,14;UBERON:0007100,3.22e-09,18;UBERON:0000948,3.22e-09,18;UBERON:0005498,3.22e-09,18;UBERON:0004140,3.22e-09,18;UBERON:0009881,3.22e-09,18;UBERON:0004141,3.22e-09,18;UBERON:0003084,3.22e-09,18;UBERON:0007005,3.22e-09,18;UBERON:0004139,3.22e-09,18;UBERON:0004291,3.22e-09,18;UBERON:0005153,7.14e-08,17;UBERON:0003103,1.17e-07,43;UBERON:0004535,5.23e-07,23;UBERON:0001009,5.23e-07,23;UBERON:0004872,5.37e-07,33;UBERON:0000479,5.45e-07,349;UBERON:0005177,7.37e-07,79 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,9.52484849691981,0.0992909512008853,0,0.799962113967033,0.91763712426868,0.57423196411502,0,0.646413698057667,0.190023419456374,0,0.665191531965914,3.81018404075779,11.6862309641068,15.8481681015439,0,0,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0,0,3.9119567217402,0.436050312760893,0,0.388859798148567,5.03951117851305,1.43752564364972,0,0,0,5.91696702882678,15.4728057566929,13.9231464914909,10.1158230429799,9.52183762689659,15.2119536841483,37.2728985276045,6.22506357277798,0,0,0,0,0.768436610643109,9.7468235569969,9.72042755988173,9.88527318351495,11.1403883917483,15.2399293256613,5.02212276781312,6.13411014516713,11.0306254393203,4.40463523997555,5.61824287574826,3.22573719838111,10.5509030184155,11.3444678066988,9.89735404057844,7.53794097303729,4.50210088025344,5.04234217663473,12.0797720044204,10.2507610175354,13.4207600994216,1.59025005999687,4.76100828672749,141.453870486419,55.0671281268087,2.03991400112325,1.07940638327563,1.94932925234301,3.13618820968135,7.72444310724635,0,0,0,0.14084341977668,0,0,0,0,0,0,11.1900202124679,8.54495016035667,9.94562331734326,14.7462527751215,20.3991870469135,11.5307748628029,14.3186508524991,10.347806227942,9.04799457573663,35.5960753537498,14.8937337627509,1.76922110389975,15.2060838950565,10.1587098491781,9.69750506270444,3.72783522436244,3.51336956413857,4.39838084308256,3.83185582812887,0,0,0,5.54225365797844,1.37250180845588,4.02093926761166,1.91206752211504,5.62574006126727,2.90903262383384,6.00292673350703,16.9053343991525,10.9478134136882,4.54900965180614,2.10441855886474,9.23855145035196,8.27647575960503,7.74267158163002,7.83665052745718,5.30684693380357,4.74020765053944,7.12133106653939,5.17406741478031,8.40715172438085,6.99692496620931,9.67731182901719,12.9325482132269,9.73165372289593,16.3678518265418,18.108828003899,12.7381930763836,0,0,0,33.7615009232868,33.5372265772968,28.6298677723014,31.0135603616625,26.5631712858995,29.0022172228271,23.4859284197912,29.7783475553577,25.5716099784101,18.4307031903098,26.1026267885761,23.4288859587523,21.6375981389492,18.8813099150304,26.8412837520744,3.57492912559016,5.76265829323993,0,3.70230793328962,17.9162130449597,16.2565670302307,14.6908905907186,10.2858597557905,10.4517680607089,15.2180500890047,3.79623249235609,12.1877226495768,16.0854533632172,16.7123436514567,15.0122347081723,3.59527763461689,5.83572734661674,5.17767310461355,21.0531370057921,15.7662947401426,12.3978509240388,18.7359221617689,17.4557238450863,14.1674356178443,11.6987593679876,7.23289725100051,8.79192875911699,10.9823475890402,13.6368208460088,3.33690211432188,6.2898878436225,2.47348323623339,2.02860121388503,4.82354319504834,8.14802725700543,8.0554918486227,4.05338066937588,4.94210543738547,5.75072826109418,14.5134969590716,9.04909252032226,6.81962970457202,7.3552939543984,7.23665282045051,60.5990463746463,24.8233749419335,13.2001630918041,18.8417045210459,19.4792906079457,36.0138453499904,47.8467718180888,57.9546934137663,70.3052742713612,70.868700687608,74.1464674257315,67.8394122923155,74.0818572204692,107.329601467482,0,0,9.34352118736169,7.72622889653251,4.17431533968259,8.32202974804643,0,23.7322671572111,0,0,0,0,0,0.283076530788832,0,0,0,3.21321316421807,16.1811697137426,25.6414469280848,17.2660176914791,15.8371318053634,2.65490276679926,12.3818124439041,12.6975893925195,12.0707251043775,30.4160949667196,31.6658202382245,23.2585463851399,18.1766864738753,17.4683715408513,11.0612865277536,7.37930260024991,7.21948802737308,3.40439605753788,15.665315180724,26.6478888592474,20.7906923980645,14.1872186913819,18.3719882130133,17.6067452044269,25.5750557256263,11.7335854031855,41.3072538184449,2.42581237860458,5.7710188529518,10.0107944551461,5.42816324353403,4.77489376012546,5.9090723908222,6.70405924248657,5.37733375830478,5.29699730473343,18.3684312487268,13.7043950253587,3.76736914009382,3.41735569302563,4.57556346413045,0,0,0,6.68269432610579,18.8219916180776,13.8257237646257,8.5324219249223,9.61806161666556,8.07941485860857,7.41753905116514,8.5133059397096,8.63794608547298,9.46189305030088,1.86401793926078,0,15.5497207885738,13.2366792365678,11.8615224889869,11.8827037599513,11.8269287843545,10.0927225235348,5.4685841634459,3.77493639932559,1.20792060413003,3.74439008135225,4.4241556887945,14.5962155008918,9.65482997349376,4.15746633528944,4.29664069601955,3.9736270956253,5.28859977887863,3.2491695978407,3.33189284828887,2.66723823292499,2.41982844328417,3.21611006441183,3.2712026157712,2.10378423926824,10.8830584135301,0.887943813496259,0.179427713218951,0,11.204996453867,12.9500908061316,11.3554007045704,8.36036678408357,3.51100472824754,2.82375921308533,4.60325236507177,2.29158205375759,3.09335728218638,2.74033007908257,0,2.70009000092722,1.80128481289688,0.453142408984205,0.51776031175182,1.86817225651518,13.167820822234,13.6586884603307,1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| |||
|short_description=p1@Gja4 | |||
}} |
Revision as of 03:48, 14 September 2013
Short description: | p1@Gja4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gja4_5end |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | -2bp_to_NM_008120, uc008uur.1_5end |
EntrezGene: | Gja4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.60e-09 | 14 |
respiratory tube | 1.60e-09 | 14 |
respiration organ | 1.60e-09 | 14 |
pair of lungs | 1.60e-09 | 14 |
lung primordium | 1.60e-09 | 14 |
lung bud | 1.60e-09 | 14 |
primary circulatory organ | 3.22e-09 | 18 |
heart | 3.22e-09 | 18 |
primitive heart tube | 3.22e-09 | 18 |
primary heart field | 3.22e-09 | 18 |
anterior lateral plate mesoderm | 3.22e-09 | 18 |
heart tube | 3.22e-09 | 18 |
heart primordium | 3.22e-09 | 18 |
cardiac mesoderm | 3.22e-09 | 18 |
cardiogenic plate | 3.22e-09 | 18 |
heart rudiment | 3.22e-09 | 18 |
epithelial bud | 7.14e-08 | 17 |
compound organ | 1.17e-07 | 43 |
cardiovascular system | 5.23e-07 | 23 |
circulatory system | 5.23e-07 | 23 |
splanchnic layer of lateral plate mesoderm | 5.37e-07 | 33 |
tissue | 5.45e-07 | 349 |
trunk region element | 7.37e-07 | 79 |
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