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FFCP PHASE1:Mm9::chr2:80421429..80421450,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=50884|HGNC=|MCL_coexpression_id=361|UniProt=P28660|association_with_transcript=-8bp_to_ENSMUST00000028386_5end|description=CAGE_peak_3_at_Nckap1_5end|id=chr2:80421429..80421450,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!8.44e-14!102;UBERON:0000924!8.44e-14!102;UBERON:0006601!8.44e-14!102;UBERON:0002346!3.13e-12!71;UBERON:0003075!3.13e-12!71;UBERON:0007284!3.13e-12!71;UBERON:0000033!9.50e-12!63;UBERON:0000073!3.91e-11!75;UBERON:0001016!3.91e-11!75;UBERON:0001017!1.32e-10!73;UBERON:0005743!1.32e-10!73;UBERON:0000468!2.55e-10!333;UBERON:0001049!2.97e-10!52;UBERON:0005068!2.97e-10!52;UBERON:0006241!2.97e-10!52;UBERON:0007135!2.97e-10!52;UBERON:0000955!3.58e-10!50;UBERON:0006238!3.58e-10!50;UBERON:0002616!1.25e-09!49;UBERON:0003056!1.97e-09!49;UBERON:0000922!1.42e-08!328;UBERON:0003080!1.19e-07!40;UBERON:0000025!2.23e-07!114;UBERON:0002021!2.79e-07!10;UBERON:0000411!2.79e-07!10;UBERON:0001950!2.79e-07!10;UBERON:0002020!3.61e-07!34;UBERON:0002780!3.86e-07!39;UBERON:0001890!3.86e-07!39;UBERON:0006240!3.86e-07!39;UBERON:0004111!5.10e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.60e-14,92;UBERON:0004121,1.43e-13,95;UBERON:0000924,1.43e-13,95;UBERON:0006601,1.43e-13,95;UBERON:0010371,2.92e-13,73;UBERON:0002346,3.07e-12,64;UBERON:0003075,3.07e-12,64;UBERON:0007284,3.07e-12,64;UBERON:0001016,3.84e-11,75;UBERON:0000073,1.23e-10,54;UBERON:0001017,1.30e-10,73;UBERON:0001049,2.92e-10,52;UBERON:0005068,2.92e-10,52;UBERON:0006241,2.92e-10,52;UBERON:0007135,2.92e-10,52;UBERON:0000922,9.57e-10,320;UBERON:0003056,1.93e-09,49;UBERON:0000955,2.86e-09,47;UBERON:0006238,2.86e-09,47;UBERON:0002616,9.68e-09,46;UBERON:0003080,1.17e-07,40;UBERON:0000025,2.20e-07,114;UBERON:0002021,2.76e-07,10;UBERON:0000411,2.76e-07,10;UBERON:0001950,2.76e-07,10;UBERON:0002020,3.56e-07,34;UBERON:0002780,3.82e-07,39;UBERON:0001890,3.82e-07,39;UBERON:0006240,3.82e-07,39;UBERON:0004111,5.05e-07,122|phase1_expression=11.0502704502308,2.79180326111489,5.91499011206397,2.11724947914781,4.00716583957078,2.85394762250213,2.33612640595526,0.516493293766305,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.171200729931206,0.0874204024189974,1.66554880907831,1.61980213911861,0,0,0.137114433605739,0,10.8004978491859,0.198581902401771,0.261199789138935,2.55987876469451,1.60586496747019,3.44539178469012,1.29228598847722,2.37018355954478,2.28028103347649,2.77233142735924,1.55211357458713,1.27006134691926,5.53558308826113,0,2.02196133825892,2.1610503896604,2.04169356262369,0.418531630736908,0,0,0,0,0,7.42791226055906,7.40051597902456,12.664725899156,5.47673941043627,3.92445281484804,2.63623419281366,3.4997381833371,3.3596741190087,2.87505128729943,0,0,1.00828139742739,9.00408026125814,15.7593391966316,8.76642556871652,7.28339259094552,4.7609188134483,8.23980824558033,2.71075625655306,2.66788438833342,0.899899717281399,0,0,1.49800055259202,2.30530983192933,8.8136170462206,5.53524347159932,6.94072372459561,9.42648248532552,7.28866185140325,8.57435594504678,5.84657373211242,5.51531271966013,8.8092704799511,20.0469120793745,20.8904885228491,5.40733779693795,6.49562269577109,8.85552729946492,15.355064945076,13.5063026407603,16.8078072554491,17.9723437138937,17.6540884190888,12.3023634244698,10.6016670666458,14.5097395405028,5.79728977403356,6.0229671388697,4.0798280022465,1.61910957491345,1.94932925234301,3.58421509677868,6.17955448579708,10.9075406449957,7.01422212427746,6.36011234118612,12.6759077799012,6.41632387071589,10.1922095882658,7.11066703153331,4.76280290224671,2.78695852022608,2.52762222507392,6.05174562511018,3.10725460376606,9.64873903921361,7.80683970447611,6.69824052286711,7.84092690670599,9.64624899536784,10.4653949350777,15.3313241422204,10.1349936771093,6.65157041831594,3.5384422077995,7.60304194752823,3.5334642953663,4.363877278217,7.45567044872489,15.2246014446005,16.3368431314495,2.81002760729451,0,0,0.254140454146129,28.759802765726,32.0250421973039,15.9581027183338,37.0245802009549,49.8645141794145,27.0124457927428,24.0117069340281,13.5446353920921,7.46441823660558,9.60346482047964,5.89237196482127,13.9228873970093,10.8053989083732,13.3245976055958,14.1662528765572,12.3146063463903,12.1708034270607,14.8985742049969,9.05461797586555,10.1316956678436,11.9136830505726,10.0292140773451,11.3981780862339,11.3999372182495,9.4028084960985,10.906453229621,13.1362616100206,0,0,0,17.1914391204467,11.2572508790926,11.3439098720439,11.1270025725049,10.0349758191176,8.79322543458056,9.99895962426754,11.8040296615832,10.1585847859437,11.8483091937706,10.0142153088248,7.94474333549386,6.14039947186396,5.70830299756732,8.18659154438268,35.5390013073375,21.4041593748912,3.96502539580558,4.7601101999438,10.8777007772969,14.3986736553472,10.5671318284117,11.0925938542838,6.89371935919098,7.41879941838981,6.16887780007865,6.25856027951241,7.28872105520782,3.58121649674071,6.23885078781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|EntrezGene=50884
|HGNC=
|MCL_coexpression_id=361
|UniProt=P28660
|association_with_transcript=-8bp_to_ENSMUST00000028386_5end
|description=CAGE_peak_3_at_Nckap1_5end
|id=chr2:80421429..80421450,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.44e-14!102;UBERON:0000924!8.44e-14!102;UBERON:0006601!8.44e-14!102;UBERON:0002346!3.13e-12!71;UBERON:0003075!3.13e-12!71;UBERON:0007284!3.13e-12!71;UBERON:0000033!9.50e-12!63;UBERON:0000073!3.91e-11!75;UBERON:0001016!3.91e-11!75;UBERON:0001017!1.32e-10!73;UBERON:0005743!1.32e-10!73;UBERON:0000468!2.55e-10!333;UBERON:0001049!2.97e-10!52;UBERON:0005068!2.97e-10!52;UBERON:0006241!2.97e-10!52;UBERON:0007135!2.97e-10!52;UBERON:0000955!3.58e-10!50;UBERON:0006238!3.58e-10!50;UBERON:0002616!1.25e-09!49;UBERON:0003056!1.97e-09!49;UBERON:0000922!1.42e-08!328;UBERON:0003080!1.19e-07!40;UBERON:0000025!2.23e-07!114;UBERON:0002021!2.79e-07!10;UBERON:0000411!2.79e-07!10;UBERON:0001950!2.79e-07!10;UBERON:0002020!3.61e-07!34;UBERON:0002780!3.86e-07!39;UBERON:0001890!3.86e-07!39;UBERON:0006240!3.86e-07!39;UBERON:0004111!5.10e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.60e-14,92;UBERON:0004121,1.43e-13,95;UBERON:0000924,1.43e-13,95;UBERON:0006601,1.43e-13,95;UBERON:0010371,2.92e-13,73;UBERON:0002346,3.07e-12,64;UBERON:0003075,3.07e-12,64;UBERON:0007284,3.07e-12,64;UBERON:0001016,3.84e-11,75;UBERON:0000073,1.23e-10,54;UBERON:0001017,1.30e-10,73;UBERON:0001049,2.92e-10,52;UBERON:0005068,2.92e-10,52;UBERON:0006241,2.92e-10,52;UBERON:0007135,2.92e-10,52;UBERON:0000922,9.57e-10,320;UBERON:0003056,1.93e-09,49;UBERON:0000955,2.86e-09,47;UBERON:0006238,2.86e-09,47;UBERON:0002616,9.68e-09,46;UBERON:0003080,1.17e-07,40;UBERON:0000025,2.20e-07,114;UBERON:0002021,2.76e-07,10;UBERON:0000411,2.76e-07,10;UBERON:0001950,2.76e-07,10;UBERON:0002020,3.56e-07,34;UBERON:0002780,3.82e-07,39;UBERON:0001890,3.82e-07,39;UBERON:0006240,3.82e-07,39;UBERON:0004111,5.05e-07,122
|phase1_expression=11.0502704502308,2.79180326111489,5.91499011206397,2.11724947914781,4.00716583957078,2.85394762250213,2.33612640595526,0.516493293766305,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.171200729931206,0.0874204024189974,1.66554880907831,1.61980213911861,0,0,0.137114433605739,0,10.8004978491859,0.198581902401771,0.261199789138935,2.55987876469451,1.60586496747019,3.44539178469012,1.29228598847722,2.37018355954478,2.28028103347649,2.77233142735924,1.55211357458713,1.27006134691926,5.53558308826113,0,2.02196133825892,2.1610503896604,2.04169356262369,0.418531630736908,0,0,0,0,0,7.42791226055906,7.40051597902456,12.664725899156,5.47673941043627,3.92445281484804,2.63623419281366,3.4997381833371,3.3596741190087,2.87505128729943,0,0,1.00828139742739,9.00408026125814,15.7593391966316,8.76642556871652,7.28339259094552,4.7609188134483,8.23980824558033,2.71075625655306,2.66788438833342,0.899899717281399,0,0,1.49800055259202,2.30530983192933,8.8136170462206,5.53524347159932,6.94072372459561,9.42648248532552,7.28866185140325,8.57435594504678,5.84657373211242,5.51531271966013,8.8092704799511,20.0469120793745,20.8904885228491,5.40733779693795,6.49562269577109,8.85552729946492,15.355064945076,13.5063026407603,16.8078072554491,17.9723437138937,17.6540884190888,12.3023634244698,10.6016670666458,14.5097395405028,5.79728977403356,6.0229671388697,4.0798280022465,1.61910957491345,1.94932925234301,3.58421509677868,6.17955448579708,10.9075406449957,7.01422212427746,6.36011234118612,12.6759077799012,6.41632387071589,10.1922095882658,7.11066703153331,4.76280290224671,2.78695852022608,2.52762222507392,6.05174562511018,3.10725460376606,9.64873903921361,7.80683970447611,6.69824052286711,7.84092690670599,9.64624899536784,10.4653949350777,15.3313241422204,10.1349936771093,6.65157041831594,3.5384422077995,7.60304194752823,3.5334642953663,4.363877278217,7.45567044872489,15.2246014446005,16.3368431314495,2.81002760729451,0,0,0.254140454146129,28.759802765726,32.0250421973039,15.9581027183338,37.0245802009549,49.8645141794145,27.0124457927428,24.0117069340281,13.5446353920921,7.46441823660558,9.60346482047964,5.89237196482127,13.9228873970093,10.8053989083732,13.3245976055958,14.1662528765572,12.3146063463903,12.1708034270607,14.8985742049969,9.05461797586555,10.1316956678436,11.9136830505726,10.0292140773451,11.3981780862339,11.3999372182495,9.4028084960985,10.906453229621,13.1362616100206,0,0,0,17.1914391204467,11.2572508790926,11.3439098720439,11.1270025725049,10.0349758191176,8.79322543458056,9.99895962426754,11.8040296615832,10.1585847859437,11.8483091937706,10.0142153088248,7.94474333549386,6.14039947186396,5.70830299756732,8.18659154438268,35.5390013073375,21.4041593748912,3.96502539580558,4.7601101999438,10.8777007772969,14.3986736553472,10.5671318284117,11.0925938542838,6.89371935919098,7.41879941838981,6.16887780007865,6.25856027951241,7.28872105520782,3.58121649674071,6.23885078781184,7.19055526923377,3.24207074812041,2.19055400579804,7.01771233526402,10.5108631600951,13.5249282807697,12.0154283428735,13.5766741017338,10.2398297039865,13.7855650930881,11.6612016903886,8.00693511991011,8.63780147452604,1.77871576252289,4.83850806576673,5.11053387294328,3.37293168577281,3.24576194221605,3.61765739628625,3.31013607315846,4.60313819921297,5.35046248357617,4.11842119782122,8.62609239164127,9.30352369171258,6.24075346229121,5.05157755894223,6.63770430031075,4.3419916922703,8.31389355749721,12.127450353311,14.3409179268983,9.33597971763535,12.9079636558676,11.3904255060435,13.5684875305028,9.95181604074774,10.719189799221,15.2810635857655,11.0023790373666,9.01248230936559,8.11619414769709,7.23245292907558,0,0,5.90117127622843,5.51873492609465,31.9495674075706,28.3652281553132,9.50822683184717,3.53459298086122,5.99465616890888,10.5418460960092,12.2791336707695,13.860190281248,11.8083297263669,15.286132662597,10.1202675418724,10.5212108848072,12.6492088942888,28.5975971615408,9.08416545332919,7.83488656135923,15.9629220166505,9.89820737835213,5.30980553359851,6.31229654002952,5.13950046840077,5.84675747243284,3.2483208216885,8.30074899448604,8.78656196771952,7.99774204850512,5.34746067577082,3.47640433729398,0,2.06271086496374,8.85142974959849,14.0447653344422,5.95049945400671,10.9311887866112,10.4630737848941,8.38333442729732,12.176627524557,4.56697423671899,11.9682571112492,18.2175580942885,4.85162475720916,11.2122652000206,8.7190790415789,12.6054013099846,13.6084472163576,13.459553779095,6.99554007911642,28.740921811629,2.39219233116994,10.5257302661243,8.70414278637645,4.89757988212197,1.6403307326523,2.28778173206523,0.679913719975421,0.279902904647316,0.552799895217695,0.954670618015114,12.0207677560831,11.7925290933572,10.0444966964275,11.2907679847813,8.07941485860857,6.60835297285622,5.86839535649885,4.71160695571253,2.85152941241944,4.97071450469541,10.1464728963154,15.1011711504419,11.5820943319968,11.4726201122988,13.3034618182063,13.0096216627899,13.4960824442617,12.4996209450192,20.4475721630136,12.5623742829523,10.3690802252832,2.52808896502543,6.08175645870493,4.41657115808757,3.50786222040047,4.11761400035207,3.57626438606277,1.68273629327956,2.51072196196781,1.71642964911851,1.752756553065,1.71404514732629,0.974578807397524,0.962118416403295,1.28564592399726,5.21479882314986,7.76950836809226,10.1376657968708,8.05846158547577,8.30715254338419,9.3841237725591,9.15758121336325,10.0753138167161,3.51100472824754,23.7195773899168,24.3972375348804,15.4681788628637,19.247556422493,21.9226406326606,21.1510291269116,17.550585006027,19.8141329418657,21.7508356312418,21.7459330935764,13.0772057956063,15.1629451892392,9.39034831647738,12.1553358534147,11.738337107167,12.685202083051,11.1123363900808,14.0103838922448,8.98573786857083,11.1186773176071,12.1670063947315,11.1289541417785,10.3942073291569,12.9971059381885,12.6358031702349,12.3836359733599,12.2837385501547,10.2241886845764,9.89006161927936,8.53753736779504,8.9146005620208,10.1161209510822,10.7296285476294,7.99405291477807,10.822578747763,9.30760686808441,13.1708140468396,7.62902163169744,10.0495044245938,11.2228454331548,12.5753119211625,13.0025916735744,11.867700251921,11.3103894065755,10.6098636039628,11.7410971630835,8.4215379040347,7.95022899978704,8.41668661102911,7.72069966918304,6.72416723299222
|short_description=p3@Nckap1
}}

Revision as of 00:44, 14 September 2013

Short description:p3@Nckap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nckap1_5end
Coexpression cluster:MCL_coexpression_mm9:361
Association with transcript: -8bp_to_ENSMUST00000028386_5end
EntrezGene:Nckap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nckap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.76
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.30
Mouse Schwann, donor1.CNhs12507.11728-123D910.60
Mouse Schwann, donor2.CNhs12573.11746-123F914.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D79.65
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F59.65
adrenal gland, neonate N00.CNhs11191.1311-23C110.47
adrenal gland, neonate N25.CNhs11223.1377-27I315.33
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I216.34
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A428.76
corpus striatum, adult.CNhs10487.19-21D832.03
corpus striatum, neonate N00.CNhs11226.630-43F115.96
cortex, adult.CNhs10473.12-14D537.02
cortex, neonate N30.CNhs11107.1392-42F249.86
diencephalon, adult.CNhs10482.20-12F227.01
diencephalon, neonate N30.CNhs11201.1388-42B224.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.54
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.46
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C613.92
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C913.32
eyeball, embryo E17.CNhs11023.1261-18D414.17
eyeball, neonate N00.CNhs11207.633-15C612.31
eyeball, neonate N01.CNhs11140.1532-43E712.17
eyeball, neonate N02.CNhs11205.1551-44G814.90
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H211.91
forelimb, embryo E13.CNhs10589.384-1E210.03
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I613.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E917.19
heart, embryo E12.CNhs11015.353-12F511.26
heart, embryo E13.CNhs11013.376-3I911.34
heart, embryo E14.CNhs10597.403-26D411.13
heart, embryo E15.CNhs11017.431-16C810.03
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G311.80
heart, neonate N00.CNhs11213.639-21E310.16
heart, neonate N03.CNhs11221.1349-25I211.85
heart, neonate N10.CNhs11118.749-24G110.01
heart, neonate N16.CNhs11209.782-15G17.94
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E835.54
hippocampus, neonate N00.CNhs11228.627-43G121.40
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D514.40
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F77.42
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F810.51
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C713.58
kidney, neonate N00.CNhs11214.646-21G710.24
kidney, neonate N10.CNhs11206.758-6D513.79
kidney, neonate N20.CNhs11113.832-19I111.66
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H18.64
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F45.35
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G212.13
lung, embryo E14.CNhs10604.404-26F814.34
lung, embryo E15.CNhs11020.432-17C59.34
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A611.39
lung, embryo E18.CNhs10583.1287-20I613.57
lung, neonate N00.CNhs11224.640-42C69.95
lung, neonate N06.CNhs11212.683-20E510.72
lung, neonate N07.CNhs11111.715-19A315.28
lung, neonate N10.CNhs11219.750-23E611.00
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C78.12
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C231.95
medulla oblongata, neonate N30.CNhs11200.1396-42A328.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.65
olfactory brain, adult.CNhs10489.18-22I928.60
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H77.83
ovary, neonate N00.CNhs11217.1299-22I415.96
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E614.04
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B910.46
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F512.18
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I711.97
placenta, adult pregnant day17.CNhs10464.577-18G318.22
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C311.21
skin, neonate N00.CNhs11124.650-25G48.72
skin, neonate N03.CNhs11215.662-22H312.61
skin, neonate N06.CNhs11097.693-20I513.61
skin, neonate N10.CNhs11108.762-6C413.46
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C928.74
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E312.02
stomach, embryo E15.CNhs10603.1252-16G811.79
stomach, embryo E16.CNhs11022.459-17D410.04
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C68.08
stomach, neonate N03.CNhs11193.1340-24B86.61
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F515.10
testis, embryo E15.CNhs11034.443-27C511.58
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I513.30
testis, embryo E18.CNhs11027.503-18G513.01
testis, neonate N00.CNhs11189.1300-22B713.50
testis, neonate N07.CNhs11222.726-26I412.50
testis, neonate N10.CNhs11204.763-44D920.45
testis, neonate N20.CNhs11110.839-18H312.56
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.06
urinary bladder, adult.CNhs10481.879-12E48.31
uterus, adult pregnant day19.CNhs10497.590-15F59.38
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I813.08
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D212.16
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F212.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.12
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.31
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest9.60e-1492
ectoderm-derived structure1.43e-1395
ectoderm1.43e-1395
presumptive ectoderm1.43e-1395
ecto-epithelium2.92e-1373
neurectoderm3.07e-1264
neural plate3.07e-1264
presumptive neural plate3.07e-1264
nervous system3.84e-1175
regional part of nervous system1.23e-1054
central nervous system1.30e-1073
neural tube2.92e-1052
neural rod2.92e-1052
future spinal cord2.92e-1052
neural keel2.92e-1052
embryo9.57e-10320
pre-chordal neural plate1.93e-0949
brain2.86e-0947
future brain2.86e-0947
regional part of brain9.68e-0946
anterior neural tube1.17e-0740
tube2.20e-07114
occipital lobe2.76e-0710
visual cortex2.76e-0710
neocortex2.76e-0710
gray matter3.56e-0734
regional part of forebrain3.82e-0739
forebrain3.82e-0739
future forebrain3.82e-0739
anatomical conduit5.05e-07122







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