FFCP PHASE1:Mm9::chr14:58618073..58618110,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68514|HGNC=|MCL_coexpression_id=638|UniProt=Q8CD10|association_with_transcript=0bp_to_ENSMUST00000022543,NM_028643,uc007udv.1_5end|description=CAGE_peak_1_at_Efha1_5end|id=chr14:58618073..58618110,-|ontology_enrichment_celltype=CL:0000066!6.52e-08!25;CL:0002076!7.06e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,6.52e-08,25;CL:0002076,7.06e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.11e-09!15;UBERON:0001242!1.05e-08!13;UBERON:0000060!1.05e-08!13;UBERON:0001262!1.05e-08!13;UBERON:0004786!1.05e-08!13;UBERON:0000160!1.16e-08!43;UBERON:0005409!2.00e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.36e-11,31;UBERON:0005409,2.77e-10,47;UBERON:0000344,1.11e-09,15;UBERON:0001242,1.05e-08,13;UBERON:0001262,1.05e-08,13;UBERON:0004786,1.05e-08,13|phase1_expression=55.8919476395731,174.83667922732,179.269700319477,159.398639358699,167.29917380208,87.1293421222708,81.2971989272429,50.2289728187732,11.1223090499817,12.6394844213876,21.9158999328646,19.1453181588807,44.3409890521823,35.4052629796939,59.6266473650036,40.2925782105754,58.0636358846362,49.3698288785642,50.1838826997004,41.1657962244089,34.18740264073,47.8582384788267,43.6203647862022,84.6359916577121,88.7813917729948,160.784949952206,153.78203262879,109.02844373906,102.232599667529,147.941686169079,80.4881753678756,23.4961349180064,19.0670084151217,15.8481681015439,90.9882602216515,74.6393557659631,83.9136054238337,98.7734648539102,94.5415766873799,115.175223674236,104.705204869521,116.117732442936,114.094932962321,49.2256558284507,54.9462967209769,62.5894424871334,41.4667412504461,32.2677231443061,37.7860234303292,42.9690076954166,51.6549895797588,31.6255641602937,35.4021298781824,40.6202799526353,36.6342241065286,52.7381843873691,77.9370956633418,55.1769138736863,43.0934061630943,41.2612963832186,54.5095007015314,39.3059657200193,45.3540346016681,30.1466405289269,31.6437236021432,27.7087244828979,23.668408730954,34.1954291736184,34.2175720617976,38.6116983628635,40.3823925794653,44.2759025825896,46.6032621407905,44.0966877173835,34.9835969216563,55.1531271966013,33.0347642998166,33.5817699164044,29.03163478543,47.7428361583302,36.412082153759,46.3612899795516,27.6391169011367,25.8870800614573,37.1299742097649,53.9170311416812,53.2470086188645,49.0230542520541,46.1929779332423,50.6329452715463,47.8276406357768,39.5794983411438,36.0384806865108,50.7321000139548,65.6274181622146,105.286318467874,40.3075485778128,67.4904077409109,65.7258591645258,64.6611421353923,61.266887602856,101.377917157311,208.940296559449,227.541345009066,53.0403050477475,47.8850145747936,50.0469200564635,61.5451111685733,58.2610238206136,50.9156536992349,43.7183023450662,36.8403228757691,44.0475599759072,48.8341355390497,52.0917972611172,54.1623008630901,55.6188677402341,39.4756244391359,27.4229271104461,75.2215852255453,54.3270135412568,42.6690222758995,65.2371164263428,32.4986684682817,24.9241581108012,91.1981687094671,51.7601337865576,46.1925102864924,48.0325458336185,27.861058929297,28.8225379775735,45.9894928733084,24.1615805067264,24.2929684463814,25.973505569945,24.8229132493669,64.4643173172502,48.3943115673262,38.4138592819186,43.7719060243866,42.2891439628787,49.8887566620636,55.6391981098529,53.5002103316788,51.8438123533118,50.348692071946,53.1288778253662,38.0293954986353,37.9399667561802,48.6002626031296,46.4510967792825,45.5927123449356,46.4338906206748,60.595876974857,61.5288587859751,49.5595324378048,32.3018066164088,31.1390967608805,34.9521104256579,57.5809647648695,59.8041452951795,58.1600458519078,50.9001181508202,65.5224891718855,61.7068451549513,68.1324458118695,65.7269833429067,79.0501367825737,71.254415012537,80.4420573987567,84.8790435945109,88.3047924049007,67.4018853943525,86.1605208441587,28.3891430561572,50.1145462287115,146.045102078839,88.0620386989603,42.6576501070468,48.7697010906921,43.9438043108338,48.4040459096022,53.3707305227689,68.8616766527464,103.447335416704,75.102723354149,74.8978922224803,71.8232864068554,72.5266404083127,86.2866632308053,98.1266746431112,99.1723540806749,40.5889308039595,49.3553574474029,43.9560169125014,57.4296744523786,52.9490289967618,64.3145468394221,65.2601063122335,50.6302807570035,73.7894020854462,66.0174826981633,37.6494836400679,40.3765155832948,33.6115881643577,41.3746286788131,50.1064499829602,40.0354085189012,44.8141499135299,42.57902834272,53.5046248357617,76.6026342794747,86.2609239164127,91.1745321787833,93.2992642612536,66.1756660221433,73.552939543984,49.2092391790635,44.5255188301517,48.6992928250146,44.163508615789,50.4142904752309,47.8768106508544,43.3841206774303,38.5630698235342,55.6130896394727,56.906287022335,55.8091017914913,55.0118951868331,41.293555308366,47.4883700131213,41.6589288714753,79.9193804878143,108.237231079923,24.0964493779328,36.4236505122247,35.3211297973142,33.0536956190013,37.7050374366354,54.2812493489402,54.2674137395962,46.4622105713,53.4250026377341,56.3966363168023,61.492434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| ||
|EntrezGene=68514 | |||
|HGNC= | |||
|MCL_coexpression_id=638 | |||
|UniProt=Q8CD10 | |||
|association_with_transcript=0bp_to_ENSMUST00000022543,NM_028643,uc007udv.1_5end | |||
|description=CAGE_peak_1_at_Efha1_5end | |||
|id=chr14:58618073..58618110,- | |||
|ontology_enrichment_celltype=CL:0000066!6.52e-08!25;CL:0002076!7.06e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.52e-08,25;CL:0002076,7.06e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.11e-09!15;UBERON:0001242!1.05e-08!13;UBERON:0000060!1.05e-08!13;UBERON:0001262!1.05e-08!13;UBERON:0004786!1.05e-08!13;UBERON:0000160!1.16e-08!43;UBERON:0005409!2.00e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.36e-11,31;UBERON:0005409,2.77e-10,47;UBERON:0000344,1.11e-09,15;UBERON:0001242,1.05e-08,13;UBERON:0001262,1.05e-08,13;UBERON:0004786,1.05e-08,13 | |||
|phase1_expression=55.8919476395731,174.83667922732,179.269700319477,159.398639358699,167.29917380208,87.1293421222708,81.2971989272429,50.2289728187732,11.1223090499817,12.6394844213876,21.9158999328646,19.1453181588807,44.3409890521823,35.4052629796939,59.6266473650036,40.2925782105754,58.0636358846362,49.3698288785642,50.1838826997004,41.1657962244089,34.18740264073,47.8582384788267,43.6203647862022,84.6359916577121,88.7813917729948,160.784949952206,153.78203262879,109.02844373906,102.232599667529,147.941686169079,80.4881753678756,23.4961349180064,19.0670084151217,15.8481681015439,90.9882602216515,74.6393557659631,83.9136054238337,98.7734648539102,94.5415766873799,115.175223674236,104.705204869521,116.117732442936,114.094932962321,49.2256558284507,54.9462967209769,62.5894424871334,41.4667412504461,32.2677231443061,37.7860234303292,42.9690076954166,51.6549895797588,31.6255641602937,35.4021298781824,40.6202799526353,36.6342241065286,52.7381843873691,77.9370956633418,55.1769138736863,43.0934061630943,41.2612963832186,54.5095007015314,39.3059657200193,45.3540346016681,30.1466405289269,31.6437236021432,27.7087244828979,23.668408730954,34.1954291736184,34.2175720617976,38.6116983628635,40.3823925794653,44.2759025825896,46.6032621407905,44.0966877173835,34.9835969216563,55.1531271966013,33.0347642998166,33.5817699164044,29.03163478543,47.7428361583302,36.412082153759,46.3612899795516,27.6391169011367,25.8870800614573,37.1299742097649,53.9170311416812,53.2470086188645,49.0230542520541,46.1929779332423,50.6329452715463,47.8276406357768,39.5794983411438,36.0384806865108,50.7321000139548,65.6274181622146,105.286318467874,40.3075485778128,67.4904077409109,65.7258591645258,64.6611421353923,61.266887602856,101.377917157311,208.940296559449,227.541345009066,53.0403050477475,47.8850145747936,50.0469200564635,61.5451111685733,58.2610238206136,50.9156536992349,43.7183023450662,36.8403228757691,44.0475599759072,48.8341355390497,52.0917972611172,54.1623008630901,55.6188677402341,39.4756244391359,27.4229271104461,75.2215852255453,54.3270135412568,42.6690222758995,65.2371164263428,32.4986684682817,24.9241581108012,91.1981687094671,51.7601337865576,46.1925102864924,48.0325458336185,27.861058929297,28.8225379775735,45.9894928733084,24.1615805067264,24.2929684463814,25.973505569945,24.8229132493669,64.4643173172502,48.3943115673262,38.4138592819186,43.7719060243866,42.2891439628787,49.8887566620636,55.6391981098529,53.5002103316788,51.8438123533118,50.348692071946,53.1288778253662,38.0293954986353,37.9399667561802,48.6002626031296,46.4510967792825,45.5927123449356,46.4338906206748,60.595876974857,61.5288587859751,49.5595324378048,32.3018066164088,31.1390967608805,34.9521104256579,57.5809647648695,59.8041452951795,58.1600458519078,50.9001181508202,65.5224891718855,61.7068451549513,68.1324458118695,65.7269833429067,79.0501367825737,71.254415012537,80.4420573987567,84.8790435945109,88.3047924049007,67.4018853943525,86.1605208441587,28.3891430561572,50.1145462287115,146.045102078839,88.0620386989603,42.6576501070468,48.7697010906921,43.9438043108338,48.4040459096022,53.3707305227689,68.8616766527464,103.447335416704,75.102723354149,74.8978922224803,71.8232864068554,72.5266404083127,86.2866632308053,98.1266746431112,99.1723540806749,40.5889308039595,49.3553574474029,43.9560169125014,57.4296744523786,52.9490289967618,64.3145468394221,65.2601063122335,50.6302807570035,73.7894020854462,66.0174826981633,37.6494836400679,40.3765155832948,33.6115881643577,41.3746286788131,50.1064499829602,40.0354085189012,44.8141499135299,42.57902834272,53.5046248357617,76.6026342794747,86.2609239164127,91.1745321787833,93.2992642612536,66.1756660221433,73.552939543984,49.2092391790635,44.5255188301517,48.6992928250146,44.163508615789,50.4142904752309,47.8768106508544,43.3841206774303,38.5630698235342,55.6130896394727,56.906287022335,55.8091017914913,55.0118951868331,41.293555308366,47.4883700131213,41.6589288714753,79.9193804878143,108.237231079923,24.0964493779328,36.4236505122247,35.3211297973142,33.0536956190013,37.7050374366354,54.2812493489402,54.2674137395962,46.4622105713,53.4250026377341,56.3966363168023,61.4924340467408,63.1260663659096,57.483119637835,54.0673337135927,63.2460444714438,24.4204200480573,50.5306703341436,44.8725321241483,67.2723142130269,46.3566045552825,34.5137359683903,55.1112044071808,48.9764162282897,56.3929188470135,49.6107180039698,48.2673182271966,50.9103737541396,59.9830653637884,60.6045543254026,43.9291093530784,48.4925599444994,47.442349894166,53.1085784975909,52.9379616452052,47.9920716834019,58.7283475986563,61.5370610738689,58.8617098086833,55.1239219017105,37.1447237919811,52.5664626062711,42.366414172764,62.1890082514993,93.3256191648777,75.8882805470756,67.3092242198219,63.5060870096686,57.2851740110264,85.986846805806,46.1709002006169,38.6168190603147,53.0414250665482,45.5578537329491,64.7987492096137,54.267608405247,45.2980782948915,40.4548663385376,38.4866493890059,37.3139929271944,55.3708958448766,36.69497525541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| |||
|short_description=p1@Efha1 | |||
}} | |||
Revision as of 02:37, 13 September 2013
| Short description: | p1@Efha1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Efha1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:638 |
| Association with transcript: | 0bp_to_ENSMUST00000022543, NM_028643, uc007udv.1_5end |
| EntrezGene: | Efha1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.52e-08 | 25 |
| endo-epithelial cell | 7.06e-07 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.36e-11 | 31 |
| gastrointestinal system | 2.77e-10 | 47 |
| mucosa | 1.11e-09 | 15 |
| intestinal mucosa | 1.05e-08 | 13 |
| wall of intestine | 1.05e-08 | 13 |
| gastrointestinal system mucosa | 1.05e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
