FFCP PHASE1:Mm9::chr13:88961148..88961185,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13612|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000133761,ENSMUST00000134241_5end|description=CAGE_peak_2_at_Edil3_5end|id=chr13:88961148..88961185,+|ontology_enrichment_celltype=CL:0000117!2.17e-14!23;CL:0000337!2.17e-14!23;CL:0000540!5.45e-14!33;CL:0000047!5.45e-14!33;CL:0000031!5.45e-14!33;CL:0000404!5.45e-14!33;CL:0002319!6.25e-11!43;CL:0000221!6.77e-11!44;CL:0000133!6.77e-11!44;CL:0000393!2.74e-10!39;CL:0000211!2.74e-10!39;CL:0000055!7.27e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.85e-17,23;CL:0000337,3.85e-17,23;CL:0000540,6.21e-12,33;CL:0000047,6.21e-12,33;CL:0000031,6.21e-12,33;CL:0000404,6.21e-12,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0002319,1.73e-08,43;CL:0000221,4.35e-08,44;CL:0000133,4.35e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.53e-28!75;UBERON:0001016!3.53e-28!75;UBERON:0001017!7.24e-28!73;UBERON:0005743!7.24e-28!73;UBERON:0000033!8.95e-25!63;UBERON:0001049!3.12e-24!52;UBERON:0005068!3.12e-24!52;UBERON:0006241!3.12e-24!52;UBERON:0007135!3.12e-24!52;UBERON:0002346!1.07e-23!71;UBERON:0003075!1.07e-23!71;UBERON:0007284!1.07e-23!71;UBERON:0000955!6.30e-23!50;UBERON:0006238!6.30e-23!50;UBERON:0004121!1.17e-22!102;UBERON:0000924!1.17e-22!102;UBERON:0006601!1.17e-22!102;UBERON:0002616!2.23e-22!49;UBERON:0003056!3.55e-22!49;UBERON:0003080!1.87e-18!40;UBERON:0002020!3.23e-18!34;UBERON:0002780!9.90e-18!39;UBERON:0001890!9.90e-18!39;UBERON:0006240!9.90e-18!39;UBERON:0002791!6.41e-15!29;UBERON:0003528!6.41e-15!29;UBERON:0001893!6.41e-15!29;UBERON:0007811!2.44e-11!86;UBERON:0000153!3.36e-11!94;UBERON:0000956!4.25e-10!21;UBERON:0001869!4.25e-10!21;UBERON:0000203!4.25e-10!21;UBERON:0002619!6.07e-08!17;UBERON:0000025!8.17e-08!114;UBERON:0002021!1.37e-07!10;UBERON:0000411!1.37e-07!10;UBERON:0001950!1.37e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.29e-30,64;UBERON:0003075,4.29e-30,64;UBERON:0007284,4.29e-30,64;UBERON:0000073,1.27e-29,54;UBERON:0001049,1.60e-27,52;UBERON:0005068,1.60e-27,52;UBERON:0006241,1.60e-27,52;UBERON:0007135,1.60e-27,52;UBERON:0001017,3.28e-27,73;UBERON:0001016,3.46e-27,75;UBERON:0004121,8.28e-26,95;UBERON:0000924,8.28e-26,95;UBERON:0006601,8.28e-26,95;UBERON:0003056,1.80e-25,49;UBERON:0010371,1.04e-23,73;UBERON:0000955,7.21e-23,47;UBERON:0006238,7.21e-23,47;UBERON:0002616,3.44e-22,46;UBERON:0002020,5.86e-22,34;UBERON:0003080,1.12e-20,40;UBERON:0002780,9.05e-20,39;UBERON:0001890,9.05e-20,39;UBERON:0006240,9.05e-20,39;UBERON:0010314,5.81e-18,92;UBERON:0003528,1.02e-17,29;UBERON:0002791,1.02e-17,29;UBERON:0001893,1.02e-17,29;UBERON:0000956,1.51e-11,21;UBERON:0001869,1.51e-11,21;UBERON:0000203,1.51e-11,21;UBERON:0002021,2.16e-09,10;UBERON:0000411,2.16e-09,10;UBERON:0001950,2.16e-09,10;UBERON:0002619,8.33e-09,17;UBERON:0000025,1.00e-08,114;UBERON:0002420,1.43e-07,8;UBERON:0007245,1.43e-07,8;UBERON:0010009,1.43e-07,8;UBERON:0010011,1.43e-07,8;UBERON:0000454,1.43e-07,8;UBERON:0003076,2.61e-07,12;UBERON:0003057,2.61e-07,12;UBERON:0004111,4.56e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,7.48570905180512,10.0508286061686,3.80298842103708,3.04960078862219,2.66788438833342,0,0,0,1.19840044207362,0,5.49554945234932,5.94026128659439,6.09942387919008,9.99778445413313,6.84692476950002,3.42974237801871,2.68367318851062,0.919218786610021,19.82085857989,17.4931653176707,19.6616362567992,7.91317726381163,5.85520919055422,7.8137005583514,11.4465029590566,13.5063026407603,8.55670187550137,15.9099436155781,9.11178757114259,9.69277118291563,0.227178579999552,3.02286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0.647067399789637,0.220841518460394,1.93950101254089,0,4.68449275218475,3.35114730901528,0,0,0,0,12.1330417917906,10.0650132620098,3.8952849154988,9.38651329038293,5.8814555185976,12.259494629014,10.8701646255398,0.203678727700633,0.124406970610093,0,1.89397670297827,2.08192708740326,2.29902104433473,3.78130472591233,2.26057226753573,2.72145996605311,2.94661556655154,2.81105173679186,4.39795730256327,0.215567992932842,1.51284864134255,2.11141348996739,0.657587197282725,1.11218899690239,0,0.411564272815887,1.59227413454795,0,0,0,4.34964122324554,2.81431271977315,1.80062061461015,1.65721314909647,0.393528463494808,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,7.57043814830858,8.84979666461846,0,0,2.13288250535234,3.0190767341857,1.15980715189884,0.403367049246685,0.667134131534611,0.951128130562796,0,0.988193728344065,1.00534083520108,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.571242563048644,3.38123207019241,0.407302655690628,0,0.350679099451593,0.189709611372772,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| ||
|EntrezGene=13612 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000133761,ENSMUST00000134241_5end | |||
|description=CAGE_peak_2_at_Edil3_5end | |||
|id=chr13:88961148..88961185,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.17e-14!23;CL:0000337!2.17e-14!23;CL:0000540!5.45e-14!33;CL:0000047!5.45e-14!33;CL:0000031!5.45e-14!33;CL:0000404!5.45e-14!33;CL:0002319!6.25e-11!43;CL:0000221!6.77e-11!44;CL:0000133!6.77e-11!44;CL:0000393!2.74e-10!39;CL:0000211!2.74e-10!39;CL:0000055!7.27e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.85e-17,23;CL:0000337,3.85e-17,23;CL:0000540,6.21e-12,33;CL:0000047,6.21e-12,33;CL:0000031,6.21e-12,33;CL:0000404,6.21e-12,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0002319,1.73e-08,43;CL:0000221,4.35e-08,44;CL:0000133,4.35e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.53e-28!75;UBERON:0001016!3.53e-28!75;UBERON:0001017!7.24e-28!73;UBERON:0005743!7.24e-28!73;UBERON:0000033!8.95e-25!63;UBERON:0001049!3.12e-24!52;UBERON:0005068!3.12e-24!52;UBERON:0006241!3.12e-24!52;UBERON:0007135!3.12e-24!52;UBERON:0002346!1.07e-23!71;UBERON:0003075!1.07e-23!71;UBERON:0007284!1.07e-23!71;UBERON:0000955!6.30e-23!50;UBERON:0006238!6.30e-23!50;UBERON:0004121!1.17e-22!102;UBERON:0000924!1.17e-22!102;UBERON:0006601!1.17e-22!102;UBERON:0002616!2.23e-22!49;UBERON:0003056!3.55e-22!49;UBERON:0003080!1.87e-18!40;UBERON:0002020!3.23e-18!34;UBERON:0002780!9.90e-18!39;UBERON:0001890!9.90e-18!39;UBERON:0006240!9.90e-18!39;UBERON:0002791!6.41e-15!29;UBERON:0003528!6.41e-15!29;UBERON:0001893!6.41e-15!29;UBERON:0007811!2.44e-11!86;UBERON:0000153!3.36e-11!94;UBERON:0000956!4.25e-10!21;UBERON:0001869!4.25e-10!21;UBERON:0000203!4.25e-10!21;UBERON:0002619!6.07e-08!17;UBERON:0000025!8.17e-08!114;UBERON:0002021!1.37e-07!10;UBERON:0000411!1.37e-07!10;UBERON:0001950!1.37e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.29e-30,64;UBERON:0003075,4.29e-30,64;UBERON:0007284,4.29e-30,64;UBERON:0000073,1.27e-29,54;UBERON:0001049,1.60e-27,52;UBERON:0005068,1.60e-27,52;UBERON:0006241,1.60e-27,52;UBERON:0007135,1.60e-27,52;UBERON:0001017,3.28e-27,73;UBERON:0001016,3.46e-27,75;UBERON:0004121,8.28e-26,95;UBERON:0000924,8.28e-26,95;UBERON:0006601,8.28e-26,95;UBERON:0003056,1.80e-25,49;UBERON:0010371,1.04e-23,73;UBERON:0000955,7.21e-23,47;UBERON:0006238,7.21e-23,47;UBERON:0002616,3.44e-22,46;UBERON:0002020,5.86e-22,34;UBERON:0003080,1.12e-20,40;UBERON:0002780,9.05e-20,39;UBERON:0001890,9.05e-20,39;UBERON:0006240,9.05e-20,39;UBERON:0010314,5.81e-18,92;UBERON:0003528,1.02e-17,29;UBERON:0002791,1.02e-17,29;UBERON:0001893,1.02e-17,29;UBERON:0000956,1.51e-11,21;UBERON:0001869,1.51e-11,21;UBERON:0000203,1.51e-11,21;UBERON:0002021,2.16e-09,10;UBERON:0000411,2.16e-09,10;UBERON:0001950,2.16e-09,10;UBERON:0002619,8.33e-09,17;UBERON:0000025,1.00e-08,114;UBERON:0002420,1.43e-07,8;UBERON:0007245,1.43e-07,8;UBERON:0010009,1.43e-07,8;UBERON:0010011,1.43e-07,8;UBERON:0000454,1.43e-07,8;UBERON:0003076,2.61e-07,12;UBERON:0003057,2.61e-07,12;UBERON:0004111,4.56e-07,122 | |||
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|short_description=p2@Edil3 | |||
}} |
Revision as of 01:13, 13 September 2013
Short description: | p2@Edil3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Edil3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000133761, ENSMUST00000134241_5end |
EntrezGene: | Edil3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.85e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.85e-17 | 23 |
neuron | 6.21e-12 | 33 |
neuronal stem cell | 6.21e-12 | 33 |
neuroblast | 6.21e-12 | 33 |
electrically signaling cell | 6.21e-12 | 33 |
electrically responsive cell | 1.10e-08 | 39 |
electrically active cell | 1.10e-08 | 39 |
neural cell | 1.73e-08 | 43 |
ectodermal cell | 4.35e-08 | 44 |
neurectodermal cell | 4.35e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.