FFCP PHASE1:Mm9::chr6:121586236..121586255,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=232345|HGNC=|MCL_coexpression_id=56|UniProt=Q6GQT1|association_with_transcript=45bp_to_ENSMUST00000032203,NM_175628,uc009doq.1_5end|description=CAGE_peak_1_at_A2m_5end|id=chr6:121586236..121586255,+|ontology_enrichment_celltype=CL:0002319!6.52e-07!43;CL:0000221!7.78e-07!44;CL:0000133!7.78e-07!44|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.44e-08!102;UBERON:0000924!2.44e-08!102;UBERON:0006601!2.44e-08!102;UBERON:0002346!9.83e-08!71;UBERON:0003075!9.83e-08!71;UBERON:0007284!9.83e-08!71;UBERON:0001017!1.31e-07!73;UBERON:0005743!1.31e-07!73;UBERON:0000073!2.58e-07!75;UBERON:0001016!2.58e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.45e-07,73;UBERON:0001016,5.68e-07,75;UBERON:0004121,8.14e-07,95;UBERON:0000924,8.14e-07,95;UBERON:0006601,8.14e-07,95|phase1_expression=8.16759120234449,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1171861650776,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9973457985994,70.299578475031,75.0499410426734,17.778275546421,12.9377307928474,0,0,0,3.08711323243136,0.286533439938757,0,1.41621522601718,4.7609188134483,3.80298842103708,4.06613438482959,6.22506357277798,0,0,0,22.4700082888804,58.0169641035547,0.311068836925433,0.135005938331691,0.210324961351382,13.7112472513826,17.4486147351775,0.734944795289724,0.766763768145891,2.75765635983006,7.70811166995721,3.06449611404451,3.99376986466233,1.18697658957174,2.47016637726506,1.56274011167028,3.07101298901519,9.00420176050688,11.6126668310376,18.2669722993674,21.3557521198654,5.96478226640962,0.151452386666368,0.377857800533928,4.63783181922684,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,7.98032503124225,27.4018930480927,35.0535555829209,58.7818298155228,22.5770317700553,0.879666139307728,112.720905286874,0.144599356919912,0.884610551949874,3.558870698843,1.76673214768315,0.969750506270444,0,20.7874365878198,25.9713916448684,0,0,0,0,2.84602214869163,3.20250421973039,1.88481528169297,0.521472960576829,0.767146371990992,2.0778804455956,3.24482526135515,5.29564692021645,0.995255764880744,0,26.5156738416957,0.260240885925407,2.29902104433473,8.82304436046211,25.6198190320716,30.6164246180975,20.6263089658608,21.7388000978571,35.7010651619842,0.215567992932842,2.26927296201383,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.393528463494808,0.617068451549513,0.465067889500816,2.41446061259657,1.75148013550754,0.16455984991348,0.164167464079095,1.4592385718254,0.730999937126662,0.439100230582101,0.134206418760372,2.52347938276953,3.2929475961371,0,0.793351699990633,0,0.696710015581316,1.15980715189884,0.403367049246685,0.22237804384487,8.17970192284004,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,3.08470984046268,0,0,0.969762435838129,1.19230893813542,0,0,0,0,0,2.8363667971736,6.09332884850929,21.8116249013308,62.2780572662704,123.000351473733,307.333403100174,1145.31832319168,106.847114444748,13.7280706594041,14.3768206527355,6.69853705803306,3.12037673114561,0,0,0.482443521363367,0,1.89491411770485,0.651859905768103,1.69745085775188,1.17345124144251,5.3602002381381,17.853273066451,3.51240566144038,1.41871629695572,2.43611158613652,7.01600982092943,1.3109065177259,1.20879487306127,0.723245292907558,0,0,0,0,11.2385412991454,9.61135830056066,0,0.252470927204373,10.7272794601527,11.3227235846025,12.0637102730367,9.79772071605463,6.46116154838943,5.66153061577665,3.23848561339915,3.21481443702443,4.74345333535828,1.28528526568723,5.53566332312248,23.5046596840777,10.2618784392753,9.56826713240706,0,0.485561272309963,2.72091201268276,0.377210159511796,0,3.99665692327106,2.06742634534577,0.363533729477506,0.356497378384721,0,0,0,12.2558258071364,0.36012218806262,0.776152102696527,1.07168517515796,1.59606210278046,5.52943334566419,6.41741180348272,13.700922710157,2863.69885350146,105.492371290182,0,0,0,0.0603129249281559,0,0,0,31.1514507377656,0.170870880797853,0.619160603889667,4.07427960213366,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.972048067396211,1.04544148007234,14.1935666435015,0.944050424693745,0.826534557253359,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.583353565032143,0.774958940866387,0.506868376472335,0.58678619322877,0.781226309063701,0.104859344425711,0,0,0,0.405450430580328,0.102710957164827,0,0,0.596044064343795,0,0,0.201932899896295,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,948.359548454823,72.7111948341042,3.85863082342319,0,1.12950368523413,0,0.572895513439397,1.71853182343688,0,0,1.35004500046361,0,0,0,0.207574695168353,1.19707462020309,2.73173769206615,14.1001895899611,5.8691685535835,27.5765262675021,78.2308481861686,91.6856004713079,80.5507216075456,93.4979683526051,90.2386307609253,100.160587276006,116.958242829883,114.348922195097,135.77744861107,121.931184968467,125.039187694499,125.583902521872,110.026935514483,113.931964184024,81.9457513201143,94.9495562952456,92.9901140794552,81.6846861473686,92.6977397091007,97.814486722778,102.25673683588,88.1283533316774,105.383992344389,72.948495315506,122.78724375852,124.11564779321,117.858540432871,111.864399336267,81.4065898340417,1.74867404556562,105.97101862577,13.7517474590911,2.29545998482612,3.30887128679273,2.31867835620421|short_description=p1@A2m}} | ||
|EntrezGene=232345 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=Q6GQT1 | |||
|association_with_transcript=45bp_to_ENSMUST00000032203,NM_175628,uc009doq.1_5end | |||
|description=CAGE_peak_1_at_A2m_5end | |||
|id=chr6:121586236..121586255,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.52e-07!43;CL:0000221!7.78e-07!44;CL:0000133!7.78e-07!44 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.44e-08!102;UBERON:0000924!2.44e-08!102;UBERON:0006601!2.44e-08!102;UBERON:0002346!9.83e-08!71;UBERON:0003075!9.83e-08!71;UBERON:0007284!9.83e-08!71;UBERON:0001017!1.31e-07!73;UBERON:0005743!1.31e-07!73;UBERON:0000073!2.58e-07!75;UBERON:0001016!2.58e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.45e-07,73;UBERON:0001016,5.68e-07,75;UBERON:0004121,8.14e-07,95;UBERON:0000924,8.14e-07,95;UBERON:0006601,8.14e-07,95 | |||
|phase1_expression=8.16759120234449,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1171861650776,0,0,0,0,0,0,0.430942465371778,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,0,28.9973457985994,70.299578475031,75.0499410426734,17.778275546421,12.9377307928474,0,0,0,3.08711323243136,0.286533439938757,0,1.41621522601718,4.7609188134483,3.80298842103708,4.06613438482959,6.22506357277798,0,0,0,22.4700082888804,58.0169641035547,0.311068836925433,0.135005938331691,0.210324961351382,13.7112472513826,17.4486147351775,0.734944795289724,0.766763768145891,2.75765635983006,7.70811166995721,3.06449611404451,3.99376986466233,1.18697658957174,2.47016637726506,1.56274011167028,3.07101298901519,9.00420176050688,11.6126668310376,18.2669722993674,21.3557521198654,5.96478226640962,0.151452386666368,0.377857800533928,4.63783181922684,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,7.98032503124225,27.4018930480927,35.0535555829209,58.7818298155228,22.5770317700553,0.879666139307728,112.720905286874,0.144599356919912,0.884610551949874,3.558870698843,1.76673214768315,0.969750506270444,0,20.7874365878198,25.9713916448684,0,0,0,0,2.84602214869163,3.20250421973039,1.88481528169297,0.521472960576829,0.767146371990992,2.0778804455956,3.24482526135515,5.29564692021645,0.995255764880744,0,26.5156738416957,0.260240885925407,2.29902104433473,8.82304436046211,25.6198190320716,30.6164246180975,20.6263089658608,21.7388000978571,35.7010651619842,0.215567992932842,2.26927296201383,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.393528463494808,0.617068451549513,0.465067889500816,2.41446061259657,1.75148013550754,0.16455984991348,0.164167464079095,1.4592385718254,0.730999937126662,0.439100230582101,0.134206418760372,2.52347938276953,3.2929475961371,0,0.793351699990633,0,0.696710015581316,1.15980715189884,0.403367049246685,0.22237804384487,8.17970192284004,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,3.08470984046268,0,0,0.969762435838129,1.19230893813542,0,0,0,0,0,2.8363667971736,6.09332884850929,21.8116249013308,62.2780572662704,123.000351473733,307.333403100174,1145.31832319168,106.847114444748,13.7280706594041,14.3768206527355,6.69853705803306,3.12037673114561,0,0,0.482443521363367,0,1.89491411770485,0.651859905768103,1.69745085775188,1.17345124144251,5.3602002381381,17.853273066451,3.51240566144038,1.41871629695572,2.43611158613652,7.01600982092943,1.3109065177259,1.20879487306127,0.723245292907558,0,0,0,0,11.2385412991454,9.61135830056066,0,0.252470927204373,10.7272794601527,11.3227235846025,12.0637102730367,9.79772071605463,6.46116154838943,5.66153061577665,3.23848561339915,3.21481443702443,4.74345333535828,1.28528526568723,5.53566332312248,23.5046596840777,10.2618784392753,9.56826713240706,0,0.485561272309963,2.72091201268276,0.377210159511796,0,3.99665692327106,2.06742634534577,0.363533729477506,0.356497378384721,0,0,0,12.2558258071364,0.36012218806262,0.776152102696527,1.07168517515796,1.59606210278046,5.52943334566419,6.41741180348272,13.700922710157,2863.69885350146,105.492371290182,0,0,0,0.0603129249281559,0,0,0,31.1514507377656,0.170870880797853,0.619160603889667,4.07427960213366,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.972048067396211,1.04544148007234,14.1935666435015,0.944050424693745,0.826534557253359,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.583353565032143,0.774958940866387,0.506868376472335,0.58678619322877,0.781226309063701,0.104859344425711,0,0,0,0.405450430580328,0.102710957164827,0,0,0.596044064343795,0,0,0.201932899896295,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,948.359548454823,72.7111948341042,3.85863082342319,0,1.12950368523413,0,0.572895513439397,1.71853182343688,0,0,1.35004500046361,0,0,0,0.207574695168353,1.19707462020309,2.73173769206615,14.1001895899611,5.8691685535835,27.5765262675021,78.2308481861686,91.6856004713079,80.5507216075456,93.4979683526051,90.2386307609253,100.160587276006,116.958242829883,114.348922195097,135.77744861107,121.931184968467,125.039187694499,125.583902521872,110.026935514483,113.931964184024,81.9457513201143,94.9495562952456,92.9901140794552,81.6846861473686,92.6977397091007,97.814486722778,102.25673683588,88.1283533316774,105.383992344389,72.948495315506,122.78724375852,124.11564779321,117.858540432871,111.864399336267,81.4065898340417,1.74867404556562,105.97101862577,13.7517474590911,2.29545998482612,3.30887128679273,2.31867835620421 | |||
|short_description=p1@A2m | |||
}} |
Revision as of 08:45, 14 September 2013
Short description: | p1@A2m |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_A2m_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 45bp_to_ENSMUST00000032203, NM_175628, uc009doq.1_5end |
EntrezGene: | A2m |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.45e-07 | 73 |
nervous system | 5.68e-07 | 75 |
ectoderm-derived structure | 8.14e-07 | 95 |
ectoderm | 8.14e-07 | 95 |
presumptive ectoderm | 8.14e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.