FFCP PHASE1:Mm9::chr9:53619482..53619494,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72022|HGNC=|MCL_coexpression_id=88|UniProt=Q7TML3|association_with_transcript=140bp_to_ENSMUST00000048670,NM_028060,uc009pmn.2_5end|description=CAGE_peak_5_at_Slc35f2_5end|id=chr9:53619482..53619494,+|ontology_enrichment_celltype=CL:0002563!2.20e-09!9;CL:0002251!2.20e-09!9;CL:0000239!3.44e-07!6;CL:0000677!3.44e-07!6;CL:0000212!3.44e-07!6;CL:0000584!3.44e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,3.29e-11,6;CL:0000677,3.29e-11,6;CL:0000584,3.29e-11,6;CL:0000075,1.27e-09,7;CL:0002563,1.70e-07,9;CL:0002251,1.70e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.42e-15!43;UBERON:0000344!1.51e-14!15;UBERON:0001242!1.63e-13!13;UBERON:0000060!1.63e-13!13;UBERON:0001262!1.63e-13!13;UBERON:0004786!1.63e-13!13;UBERON:0005409!7.48e-12!59;UBERON:0004923!8.63e-10!24;UBERON:0003350!2.20e-09!9;UBERON:0004808!2.20e-09!9;UBERON:0001277!2.20e-09!9;UBERON:0000489!1.27e-07!21;UBERON:0000485!3.46e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.48e-30,31;UBERON:0005409,8.19e-19,47;UBERON:0001242,9.09e-15,13;UBERON:0001262,9.09e-15,13;UBERON:0004786,9.09e-15,13;UBERON:0000344,1.10e-12,15;UBERON:0002108,1.03e-09,4;UBERON:0004923,1.34e-07,24;UBERON:0003350,1.70e-07,9;UBERON:0004808,1.70e-07,9;UBERON:0001277,1.70e-07,9|phase1_expression=0,5.93258192986914,1.36499771816861,17.5429242557961,19.0340377379612,0.503637815735669,0.467225281191051,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,1.14846392823004,4.73838195774982,0.861884930743556,3.42042155021473,4.28451220591882,0.886922042621219,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0.883885756421003,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,1.61729061793121,7.58168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,7.93005079161115,3.43785736662608,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.951128130562796,0.949058123089023,2.63518327558417,2.5133520880027,3.38226002469956,2.33956904542944,0.898819408654221,1.08069024937347,1.59313018603494,0.189667900953082,0,1.1270773567308,0.407302655690628,0.775809948670503,0.631222379012867,0.569128834118316,0,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0,0.16488625294148,0,0.120625849856312,0,0,3.49777003955821,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.539457385539283,0.165306911450672,0,0.259229946583586,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0,0,0.524296722128554,0.241584120826006,1.44015003128933,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0|short_description=p5@Slc35f2}} | ||
|EntrezGene=72022 | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=Q7TML3 | |||
|association_with_transcript=140bp_to_ENSMUST00000048670,NM_028060,uc009pmn.2_5end | |||
|description=CAGE_peak_5_at_Slc35f2_5end | |||
|id=chr9:53619482..53619494,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.20e-09!9;CL:0002251!2.20e-09!9;CL:0000239!3.44e-07!6;CL:0000677!3.44e-07!6;CL:0000212!3.44e-07!6;CL:0000584!3.44e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.29e-11,6;CL:0000677,3.29e-11,6;CL:0000584,3.29e-11,6;CL:0000075,1.27e-09,7;CL:0002563,1.70e-07,9;CL:0002251,1.70e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.42e-15!43;UBERON:0000344!1.51e-14!15;UBERON:0001242!1.63e-13!13;UBERON:0000060!1.63e-13!13;UBERON:0001262!1.63e-13!13;UBERON:0004786!1.63e-13!13;UBERON:0005409!7.48e-12!59;UBERON:0004923!8.63e-10!24;UBERON:0003350!2.20e-09!9;UBERON:0004808!2.20e-09!9;UBERON:0001277!2.20e-09!9;UBERON:0000489!1.27e-07!21;UBERON:0000485!3.46e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.48e-30,31;UBERON:0005409,8.19e-19,47;UBERON:0001242,9.09e-15,13;UBERON:0001262,9.09e-15,13;UBERON:0004786,9.09e-15,13;UBERON:0000344,1.10e-12,15;UBERON:0002108,1.03e-09,4;UBERON:0004923,1.34e-07,24;UBERON:0003350,1.70e-07,9;UBERON:0004808,1.70e-07,9;UBERON:0001277,1.70e-07,9 | |||
|phase1_expression=0,5.93258192986914,1.36499771816861,17.5429242557961,19.0340377379612,0.503637815735669,0.467225281191051,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,1.14846392823004,4.73838195774982,0.861884930743556,3.42042155021473,4.28451220591882,0.886922042621219,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0,0,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0.883885756421003,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,1.61729061793121,7.58168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,7.93005079161115,3.43785736662608,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0.951128130562796,0.949058123089023,2.63518327558417,2.5133520880027,3.38226002469956,2.33956904542944,0.898819408654221,1.08069024937347,1.59313018603494,0.189667900953082,0,1.1270773567308,0.407302655690628,0.775809948670503,0.631222379012867,0.569128834118316,0,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.847328283455281,0,0.16488625294148,0,0.120625849856312,0,0,3.49777003955821,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.539457385539283,0.165306911450672,0,0.259229946583586,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.129159823477731,0,0,0,0.524296722128554,0.241584120826006,1.44015003128933,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0,0,0,0.271608227691724,0,0,0,0,0,0,0.249810577937946,0,0.429742108096597,0,0,0 | |||
|short_description=p5@Slc35f2 | |||
}} |
Revision as of 18:14, 14 September 2013
Short description: | p5@Slc35f2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc35f2_5end |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | 140bp_to_ENSMUST00000048670, NM_028060, uc009pmn.2_5end |
EntrezGene: | Slc35f2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.29e-11 | 6 |
gut absorptive cell | 3.29e-11 | 6 |
enterocyte | 3.29e-11 | 6 |
columnar/cuboidal epithelial cell | 1.27e-09 | 7 |
intestinal epithelial cell | 1.70e-07 | 9 |
epithelial cell of alimentary canal | 1.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.48e-30 | 31 |
gastrointestinal system | 8.19e-19 | 47 |
intestinal mucosa | 9.09e-15 | 13 |
wall of intestine | 9.09e-15 | 13 |
gastrointestinal system mucosa | 9.09e-15 | 13 |
mucosa | 1.10e-12 | 15 |
small intestine | 1.03e-09 | 4 |
organ component layer | 1.34e-07 | 24 |
epithelium of mucosa | 1.70e-07 | 9 |
gastrointestinal system epithelium | 1.70e-07 | 9 |
intestinal epithelium | 1.70e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.