Personal tools

FFCP PHASE1:Mm9::chr12:38607158..38607235,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=217480|HGNC=|MCL_coexpression_id=2037|UniProt=Q6NS52,F8WII9,E9PZM3,Q8BUN1|association_with_transcript=-56bp_to_ENSMUST00000040500,ENSMUST00000072865,ENSMUST00000170871,NM_178681,uc007nkk.1,uc007nkl.1_5end|description=CAGE_peak_1_at_Dgkb_5end|id=chr12:38607158..38607235,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.44e-11!71;UBERON:0003075!6.44e-11!71;UBERON:0007284!6.44e-11!71;UBERON:0000955!1.18e-09!50;UBERON:0006238!1.18e-09!50;UBERON:0001049!1.18e-09!52;UBERON:0005068!1.18e-09!52;UBERON:0006241!1.18e-09!52;UBERON:0007135!1.18e-09!52;UBERON:0000033!2.94e-09!63;UBERON:0002616!4.34e-09!49;UBERON:0000468!9.25e-09!333;UBERON:0001017!1.00e-08!73;UBERON:0005743!1.00e-08!73;UBERON:0004121!4.45e-08!102;UBERON:0000924!4.45e-08!102;UBERON:0006601!4.45e-08!102;UBERON:0000073!7.56e-08!75;UBERON:0001016!7.56e-08!75;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10;UBERON:0003056!7.69e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-10,54;UBERON:0002346,3.08e-09,64;UBERON:0003075,3.08e-09,64;UBERON:0007284,3.08e-09,64;UBERON:0001049,3.62e-09,52;UBERON:0005068,3.62e-09,52;UBERON:0006241,3.62e-09,52;UBERON:0007135,3.62e-09,52;UBERON:0002021,4.09e-08,10;UBERON:0000411,4.09e-08,10;UBERON:0001950,4.09e-08,10;UBERON:0001017,8.18e-08,73;UBERON:0010371,1.07e-07,73;UBERON:0000955,1.19e-07,47;UBERON:0006238,1.19e-07,47;UBERON:0001016,3.46e-07,75;UBERON:0002616,4.38e-07,46|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.405017814995072,0.210324961351382,2.57085885963423,1.76694832761291,0.244981598429908,0,0,8.8092704799511,6.89511625660014,9.21639199537461,0.131886287730194,0.182975287204819,0,2.51264699101243,17.4456409109821,17.1134037510027,5.59794312399969,3.70166370077668,2.05039390407831,0,0,4.05810284182349,0,0,0,0,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,1.1418387971906,1.03575153458869,6.97678053604676,1.21439728736295,0.608930956624282,0.230615497256059,1.20578112442098,2.82212897125692,1.50799909595611,4.6967043869531,4.48258006451726,0,1.61766849947409,0.662524555381181,0,0,5.85561594023094,4.39838084308256,2.29911349687732,0,0,0,14.9790639404823,33.8550446085784,1.38219787324151,24.509229147111,18.1557974704535,15.1685272528479,27.418773458451,2.13862664085664,1.11966273549084,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,1.62055916824814,2.41127708537144,0.95251098811859,1.5373646434182,1.59292931751539,2.84573707812917,0,0.567318240503458,0.527853372491847,0.876782929710299,0.834141747676794,2.43776516565517,0.823128545631774,1.19420560091096,0,0,0,0,0.469052119962192,0,0.473489471170421,0,0.771335564436891,1.39520366850245,0.536546802799238,1.28441876603886,0.822799249567402,1.80584210487005,2.26992666728396,1.90059983652932,0.658650345873152,1.07365135008297,34.0669716673886,1.13195073617213,0,1.58670339998127,0.426576501070468,0.696710015581316,4.89696353023955,5.24377164020691,8.89512175379481,8.3699275489526,7.59246498471219,5.43506550589236,9.55073793441024,6.16765063327568,8.96834800747953,8.98819408654222,5.18731319699266,5.17767310461355,0.379335801906163,0.685491075658373,2.25415471346161,1.4255592949172,1.55161989734101,0.841629838683823,3.03535378196435,2.36176236767363,1.56998727841375,1.35736880313981,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,1.66277871149944,0.189491411770485,1.46668478797823,2.8856664581782,3.75504397261603,3.51763140627813,4.76087281772027,2.14647012643579,8.35466263762812,3.32197034473162,3.02964060449226,2.13022309130459,2.93564469172023,2.4590339958857,0,0,0.491764273019036,0,11.559642479121,13.0104972117346,0,2.27223834483936,2.52406575533005,1.56175497718655,2.15423397732799,0,0,0,0.809621403349789,1.46127928955656,0.790575555893047,80.00900778903,4.82596289708113,1.42452482933804,3.58351310577867,4.45419332025846,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,1.84461088766356,0.775284879504663,2.90826983582004,1.42598951353889,9.7971394960103,0,1.03135543248187,6.80879211507576,1.62054984628179,0.646793418913773,1.50035924522115,2.12808280370728,0.891844088010353,1.15184314421485,0.913394847343798,0,0,1.7642271844397,1.31909002353184,0.484393280087717,1.14594557363496,0.119372344003136,0.656563598980245,5.53813589596716,12.4234952347041,0.170870880797853,0.412773735926445,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,1.18805874903981,1.04544148007234,0,1.75323650300267,1.32245529160537,2.87931536182433,1.29614973291793,0,0,0,0.66183396182839,1.55560950675238,1.16243841129958,0.675824501963113,1.40828686374905,0.911430693907651,0.734015410979976,0,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,4.63655025677257,1.87682475451182,2.74727436400898,1.71494703263253,1.50471631210609,7.90652579663893,7.82552902062201,10.8850147553485,8.248952752497,10.2762377965596,10.5755145634558,7.42524750254986,8.10578165803597,9.9691329976525,11.39072685854,0.103787347584177,1.59609949360412,0.853668028770671,1.45864030240976,1.04806581313991,0.735374033800057,1.77797382241292,3.29656091582231,1.28367683836726,2.52697211763797,2.02783439912192,2.07488975524684,2.06011316433741,2.04880487695582,2.46972516509137,1.42888107384922,1.85414921511769,2.31491064556446,2.06042950401653,1.61918812147837,1.71434626192708,1.77475806159337,2.14592570952589,2.61623549938191,2.25862512996793,2.28459441307527,2.74391959309159,2.89376682581627,2.58027816307137,1.12228454331548,2.01679530811096,1.57607171800902,1.63692417267876,2.94379998253335,2.50778594275484,0.499621155875892,2.10538447600868,1.50409737833809,1.14772999241306,1.54413993383661,2.31867835620421|short_description=p1@Dgkb}}
|EntrezGene=217480
|HGNC=
|MCL_coexpression_id=2037
|UniProt=Q6NS52,F8WII9,E9PZM3,Q8BUN1
|association_with_transcript=-56bp_to_ENSMUST00000040500,ENSMUST00000072865,ENSMUST00000170871,NM_178681,uc007nkk.1,uc007nkl.1_5end
|description=CAGE_peak_1_at_Dgkb_5end
|id=chr12:38607158..38607235,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.44e-11!71;UBERON:0003075!6.44e-11!71;UBERON:0007284!6.44e-11!71;UBERON:0000955!1.18e-09!50;UBERON:0006238!1.18e-09!50;UBERON:0001049!1.18e-09!52;UBERON:0005068!1.18e-09!52;UBERON:0006241!1.18e-09!52;UBERON:0007135!1.18e-09!52;UBERON:0000033!2.94e-09!63;UBERON:0002616!4.34e-09!49;UBERON:0000468!9.25e-09!333;UBERON:0001017!1.00e-08!73;UBERON:0005743!1.00e-08!73;UBERON:0004121!4.45e-08!102;UBERON:0000924!4.45e-08!102;UBERON:0006601!4.45e-08!102;UBERON:0000073!7.56e-08!75;UBERON:0001016!7.56e-08!75;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10;UBERON:0003056!7.69e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.81e-10,54;UBERON:0002346,3.08e-09,64;UBERON:0003075,3.08e-09,64;UBERON:0007284,3.08e-09,64;UBERON:0001049,3.62e-09,52;UBERON:0005068,3.62e-09,52;UBERON:0006241,3.62e-09,52;UBERON:0007135,3.62e-09,52;UBERON:0002021,4.09e-08,10;UBERON:0000411,4.09e-08,10;UBERON:0001950,4.09e-08,10;UBERON:0001017,8.18e-08,73;UBERON:0010371,1.07e-07,73;UBERON:0000955,1.19e-07,47;UBERON:0006238,1.19e-07,47;UBERON:0001016,3.46e-07,75;UBERON:0002616,4.38e-07,46
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.405017814995072,0.210324961351382,2.57085885963423,1.76694832761291,0.244981598429908,0,0,8.8092704799511,6.89511625660014,9.21639199537461,0.131886287730194,0.182975287204819,0,2.51264699101243,17.4456409109821,17.1134037510027,5.59794312399969,3.70166370077668,2.05039390407831,0,0,4.05810284182349,0,0,0,0,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,1.1418387971906,1.03575153458869,6.97678053604676,1.21439728736295,0.608930956624282,0.230615497256059,1.20578112442098,2.82212897125692,1.50799909595611,4.6967043869531,4.48258006451726,0,1.61766849947409,0.662524555381181,0,0,5.85561594023094,4.39838084308256,2.29911349687732,0,0,0,14.9790639404823,33.8550446085784,1.38219787324151,24.509229147111,18.1557974704535,15.1685272528479,27.418773458451,2.13862664085664,1.11966273549084,0.252722758433675,0.420883711772948,0.130120442962704,0.229902104433473,1.62055916824814,2.41127708537144,0.95251098811859,1.5373646434182,1.59292931751539,2.84573707812917,0,0.567318240503458,0.527853372491847,0.876782929710299,0.834141747676794,2.43776516565517,0.823128545631774,1.19420560091096,0,0,0,0,0.469052119962192,0,0.473489471170421,0,0.771335564436891,1.39520366850245,0.536546802799238,1.28441876603886,0.822799249567402,1.80584210487005,2.26992666728396,1.90059983652932,0.658650345873152,1.07365135008297,34.0669716673886,1.13195073617213,0,1.58670339998127,0.426576501070468,0.696710015581316,4.89696353023955,5.24377164020691,8.89512175379481,8.3699275489526,7.59246498471219,5.43506550589236,9.55073793441024,6.16765063327568,8.96834800747953,8.98819408654222,5.18731319699266,5.17767310461355,0.379335801906163,0.685491075658373,2.25415471346161,1.4255592949172,1.55161989734101,0.841629838683823,3.03535378196435,2.36176236767363,1.56998727841375,1.35736880313981,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0.549122826376163,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,1.66277871149944,0.189491411770485,1.46668478797823,2.8856664581782,3.75504397261603,3.51763140627813,4.76087281772027,2.14647012643579,8.35466263762812,3.32197034473162,3.02964060449226,2.13022309130459,2.93564469172023,2.4590339958857,0,0,0.491764273019036,0,11.559642479121,13.0104972117346,0,2.27223834483936,2.52406575533005,1.56175497718655,2.15423397732799,0,0,0,0.809621403349789,1.46127928955656,0.790575555893047,80.00900778903,4.82596289708113,1.42452482933804,3.58351310577867,4.45419332025846,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,1.84461088766356,0.775284879504663,2.90826983582004,1.42598951353889,9.7971394960103,0,1.03135543248187,6.80879211507576,1.62054984628179,0.646793418913773,1.50035924522115,2.12808280370728,0.891844088010353,1.15184314421485,0.913394847343798,0,0,1.7642271844397,1.31909002353184,0.484393280087717,1.14594557363496,0.119372344003136,0.656563598980245,5.53813589596716,12.4234952347041,0.170870880797853,0.412773735926445,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,1.18805874903981,1.04544148007234,0,1.75323650300267,1.32245529160537,2.87931536182433,1.29614973291793,0,0,0,0.66183396182839,1.55560950675238,1.16243841129958,0.675824501963113,1.40828686374905,0.911430693907651,0.734015410979976,0,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,4.63655025677257,1.87682475451182,2.74727436400898,1.71494703263253,1.50471631210609,7.90652579663893,7.82552902062201,10.8850147553485,8.248952752497,10.2762377965596,10.5755145634558,7.42524750254986,8.10578165803597,9.9691329976525,11.39072685854,0.103787347584177,1.59609949360412,0.853668028770671,1.45864030240976,1.04806581313991,0.735374033800057,1.77797382241292,3.29656091582231,1.28367683836726,2.52697211763797,2.02783439912192,2.07488975524684,2.06011316433741,2.04880487695582,2.46972516509137,1.42888107384922,1.85414921511769,2.31491064556446,2.06042950401653,1.61918812147837,1.71434626192708,1.77475806159337,2.14592570952589,2.61623549938191,2.25862512996793,2.28459441307527,2.74391959309159,2.89376682581627,2.58027816307137,1.12228454331548,2.01679530811096,1.57607171800902,1.63692417267876,2.94379998253335,2.50778594275484,0.499621155875892,2.10538447600868,1.50409737833809,1.14772999241306,1.54413993383661,2.31867835620421
|short_description=p1@Dgkb
}}

Revision as of 22:47, 12 September 2013

Short description:p1@Dgkb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dgkb_5end
Coexpression cluster:MCL_coexpression_mm9:2037
Association with transcript: -56bp_to_ENSMUST00000040500, ENSMUST00000072865, ENSMUST00000170871, NM_178681, uc007nkk.1, uc007nkl.1_5end
EntrezGene:Dgkb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dgkb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D76.98
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.98
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D524.51
cortex, neonate N30.CNhs11107.1392-42F218.16
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B227.42
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E834.07
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D53.04
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I980.01
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.81e-1054
neurectoderm3.08e-0964
neural plate3.08e-0964
presumptive neural plate3.08e-0964
neural tube3.62e-0952
neural rod3.62e-0952
future spinal cord3.62e-0952
neural keel3.62e-0952
occipital lobe4.09e-0810
visual cortex4.09e-0810
neocortex4.09e-0810
central nervous system8.18e-0873
ecto-epithelium1.07e-0773
brain1.19e-0747
future brain1.19e-0747
nervous system3.46e-0775
regional part of brain4.38e-0746







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:38607158..38607235,%2B&oldid=2903487"