FFCP PHASE1:Mm9::chr10:109586641..109586671,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:109586641..109586671,-|id=chr10:109586641..109586671,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.72e-21!10;UBERON:0000411!1.72e-21!10;UBERON:0001950!1.72e-21!10;UBERON:0000956!5.04e-17!21;UBERON:0001869!5.04e-17!21;UBERON:0000203!5.04e-17!21;UBERON:0002619!3.47e-16!17;UBERON:0002020!5.55e-14!34;UBERON:0000033!9.24e-13!63;UBERON:0001049!2.15e-12!52;UBERON:0005068!2.15e-12!52;UBERON:0006241!2.15e-12!52;UBERON:0007135!2.15e-12!52;UBERON:0002616!4.99e-12!49;UBERON:0000955!1.10e-11!50;UBERON:0006238!1.10e-11!50;UBERON:0002346!1.20e-11!71;UBERON:0003075!1.20e-11!71;UBERON:0007284!1.20e-11!71;UBERON:0004121!2.04e-11!102;UBERON:0000924!2.04e-11!102;UBERON:0006601!2.04e-11!102;UBERON:0002791!2.56e-11!29;UBERON:0003528!2.56e-11!29;UBERON:0001893!2.56e-11!29;UBERON:0000073!8.11e-11!75;UBERON:0001016!8.11e-11!75;UBERON:0003056!2.31e-10!49;UBERON:0001017!2.63e-10!73;UBERON:0005743!2.63e-10!73;UBERON:0003080!1.55e-09!40;UBERON:0002780!1.22e-08!39;UBERON:0001890!1.22e-08!39;UBERON:0006240!1.22e-08!39;UBERON:0007811!1.48e-08!86;UBERON:0000153!2.59e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.74e-78,10;UBERON:0000411,5.74e-78,10;UBERON:0001950,5.74e-78,10;UBERON:0002619,6.54e-46,17;UBERON:0000956,3.58e-37,21;UBERON:0001869,3.58e-37,21;UBERON:0000203,3.58e-37,21;UBERON:0003528,6.56e-27,29;UBERON:0002791,6.56e-27,29;UBERON:0001893,6.56e-27,29;UBERON:0002020,6.13e-23,34;UBERON:0002780,5.55e-20,39;UBERON:0001890,5.55e-20,39;UBERON:0006240,5.55e-20,39;UBERON:0003080,1.77e-19,40;UBERON:0002616,6.46e-17,46;UBERON:0000955,1.49e-16,47;UBERON:0006238,1.49e-16,47;UBERON:0003056,7.21e-16,49;UBERON:0001049,6.10e-15,52;UBERON:0005068,6.10e-15,52;UBERON:0006241,6.10e-15,52;UBERON:0007135,6.10e-15,52;UBERON:0000073,2.22e-14,54;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0010371,1.45e-10,73;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0010314,2.60e-08,92;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0,0,0,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,1.14579102687879,4.64003592327956,0.685082519770642,1.5107877947794,1.35004500046361,1.80128481289688,2.26571204492102,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0,0,0.44449345560323,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr10:109586641..109586671,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:109586641..109586671,- | |||
|id=chr10:109586641..109586671,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.72e-21!10;UBERON:0000411!1.72e-21!10;UBERON:0001950!1.72e-21!10;UBERON:0000956!5.04e-17!21;UBERON:0001869!5.04e-17!21;UBERON:0000203!5.04e-17!21;UBERON:0002619!3.47e-16!17;UBERON:0002020!5.55e-14!34;UBERON:0000033!9.24e-13!63;UBERON:0001049!2.15e-12!52;UBERON:0005068!2.15e-12!52;UBERON:0006241!2.15e-12!52;UBERON:0007135!2.15e-12!52;UBERON:0002616!4.99e-12!49;UBERON:0000955!1.10e-11!50;UBERON:0006238!1.10e-11!50;UBERON:0002346!1.20e-11!71;UBERON:0003075!1.20e-11!71;UBERON:0007284!1.20e-11!71;UBERON:0004121!2.04e-11!102;UBERON:0000924!2.04e-11!102;UBERON:0006601!2.04e-11!102;UBERON:0002791!2.56e-11!29;UBERON:0003528!2.56e-11!29;UBERON:0001893!2.56e-11!29;UBERON:0000073!8.11e-11!75;UBERON:0001016!8.11e-11!75;UBERON:0003056!2.31e-10!49;UBERON:0001017!2.63e-10!73;UBERON:0005743!2.63e-10!73;UBERON:0003080!1.55e-09!40;UBERON:0002780!1.22e-08!39;UBERON:0001890!1.22e-08!39;UBERON:0006240!1.22e-08!39;UBERON:0007811!1.48e-08!86;UBERON:0000153!2.59e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.74e-78,10;UBERON:0000411,5.74e-78,10;UBERON:0001950,5.74e-78,10;UBERON:0002619,6.54e-46,17;UBERON:0000956,3.58e-37,21;UBERON:0001869,3.58e-37,21;UBERON:0000203,3.58e-37,21;UBERON:0003528,6.56e-27,29;UBERON:0002791,6.56e-27,29;UBERON:0001893,6.56e-27,29;UBERON:0002020,6.13e-23,34;UBERON:0002780,5.55e-20,39;UBERON:0001890,5.55e-20,39;UBERON:0006240,5.55e-20,39;UBERON:0003080,1.77e-19,40;UBERON:0002616,6.46e-17,46;UBERON:0000955,1.49e-16,47;UBERON:0006238,1.49e-16,47;UBERON:0003056,7.21e-16,49;UBERON:0001049,6.10e-15,52;UBERON:0005068,6.10e-15,52;UBERON:0006241,6.10e-15,52;UBERON:0007135,6.10e-15,52;UBERON:0000073,2.22e-14,54;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0010371,1.45e-10,73;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0010314,2.60e-08,92;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0,0,0,0,0,0,0.130120442962704,0,0,0.30140963567143,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,1.14579102687879,4.64003592327956,0.685082519770642,1.5107877947794,1.35004500046361,1.80128481289688,2.26571204492102,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0,0,0.44449345560323,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:109586641..109586671,- | |||
}} |
Revision as of 15:42, 12 September 2013
Short description: | p@chr10:109586641..109586671, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109586641..109586671, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.74e-78 | 10 |
visual cortex | 5.74e-78 | 10 |
neocortex | 5.74e-78 | 10 |
regional part of cerebral cortex | 6.54e-46 | 17 |
cerebral cortex | 3.58e-37 | 21 |
cerebral hemisphere | 3.58e-37 | 21 |
pallium | 3.58e-37 | 21 |
brain grey matter | 6.56e-27 | 29 |
regional part of telencephalon | 6.56e-27 | 29 |
telencephalon | 6.56e-27 | 29 |
gray matter | 6.13e-23 | 34 |
regional part of forebrain | 5.55e-20 | 39 |
forebrain | 5.55e-20 | 39 |
future forebrain | 5.55e-20 | 39 |
anterior neural tube | 1.77e-19 | 40 |
regional part of brain | 6.46e-17 | 46 |
brain | 1.49e-16 | 47 |
future brain | 1.49e-16 | 47 |
pre-chordal neural plate | 7.21e-16 | 49 |
neural tube | 6.10e-15 | 52 |
neural rod | 6.10e-15 | 52 |
future spinal cord | 6.10e-15 | 52 |
neural keel | 6.10e-15 | 52 |
regional part of nervous system | 2.22e-14 | 54 |
neurectoderm | 4.30e-12 | 64 |
neural plate | 4.30e-12 | 64 |
presumptive neural plate | 4.30e-12 | 64 |
ecto-epithelium | 1.45e-10 | 73 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
structure with developmental contribution from neural crest | 2.60e-08 | 92 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.