FFCP PHASE1:Mm9::chr11:65559354..65559382,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26398|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-14bp_to_ENSMUST00000138093_5end|description=CAGE_peak_4_at_Map2k4_5end|id=chr11:65559354..65559382,-|ontology_enrichment_celltype=CL:0000117!6.28e-14!23;CL:0000337!6.28e-14!23;CL:0000540!1.50e-12!33;CL:0000047!1.50e-12!33;CL:0000031!1.50e-12!33;CL:0000404!1.50e-12!33;CL:0000393!2.05e-09!39;CL:0000211!2.05e-09!39;CL:0002319!7.49e-08!43;CL:0000221!1.64e-07!44;CL:0000133!1.64e-07!44|ontology_enrichment_celltype_v019_2=CL:0002614,6.96e-08,3;CL:0000117,7.99e-08,23;CL:0000337,7.99e-08,23;CL:0002610,1.60e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.20e-29!73;UBERON:0005743!7.20e-29!73;UBERON:0001049!2.65e-28!52;UBERON:0005068!2.65e-28!52;UBERON:0006241!2.65e-28!52;UBERON:0007135!2.65e-28!52;UBERON:0000955!8.56e-28!50;UBERON:0006238!8.56e-28!50;UBERON:0000073!1.34e-27!75;UBERON:0001016!1.34e-27!75;UBERON:0002616!7.58e-27!49;UBERON:0002020!9.48e-24!34;UBERON:0003080!6.31e-22!40;UBERON:0002780!8.15e-21!39;UBERON:0001890!8.15e-21!39;UBERON:0006240!8.15e-21!39;UBERON:0000033!8.28e-21!63;UBERON:0002791!1.52e-20!29;UBERON:0003528!1.52e-20!29;UBERON:0001893!1.52e-20!29;UBERON:0002346!3.08e-20!71;UBERON:0003075!3.08e-20!71;UBERON:0007284!3.08e-20!71;UBERON:0003056!1.44e-17!49;UBERON:0004121!6.73e-17!102;UBERON:0000924!6.73e-17!102;UBERON:0006601!6.73e-17!102;UBERON:0000956!1.22e-13!21;UBERON:0001869!1.22e-13!21;UBERON:0000203!1.22e-13!21;UBERON:0002619!2.18e-12!17;UBERON:0007811!2.15e-11!86;UBERON:0002021!3.48e-11!10;UBERON:0000411!3.48e-11!10;UBERON:0001950!3.48e-11!10;UBERON:0000153!2.68e-09!94;UBERON:0002420!3.35e-08!8;UBERON:0007245!3.35e-08!8;UBERON:0010009!3.35e-08!8;UBERON:0010011!3.35e-08!8;UBERON:0000454!3.35e-08!8;UBERON:0002298!7.68e-08!6;UBERON:0003076!7.58e-07!12;UBERON:0003057!7.58e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.00e-35,54;UBERON:0001049,2.04e-31,52;UBERON:0005068,2.04e-31,52;UBERON:0006241,2.04e-31,52;UBERON:0007135,2.04e-31,52;UBERON:0000955,2.80e-30,47;UBERON:0006238,2.80e-30,47;UBERON:0002616,1.22e-28,46;UBERON:0003080,4.04e-28,40;UBERON:0001017,8.32e-28,73;UBERON:0002020,1.39e-27,34;UBERON:0003528,2.51e-27,29;UBERON:0002791,2.51e-27,29;UBERON:0001893,2.51e-27,29;UBERON:0001016,7.28e-27,75;UBERON:0002780,3.92e-26,39;UBERON:0001890,3.92e-26,39;UBERON:0006240,3.92e-26,39;UBERON:0002346,3.16e-24,64;UBERON:0003075,3.16e-24,64;UBERON:0007284,3.16e-24,64;UBERON:0003056,7.37e-22,49;UBERON:0002021,1.46e-21,10;UBERON:0000411,1.46e-21,10;UBERON:0001950,1.46e-21,10;UBERON:0010371,2.19e-20,73;UBERON:0002619,2.67e-20,17;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0000956,9.68e-19,21;UBERON:0001869,9.68e-19,21;UBERON:0000203,9.68e-19,21;UBERON:0010314,9.46e-15,92;UBERON:0000025,1.39e-10,114;UBERON:0002950,2.94e-10,4;UBERON:0001891,2.94e-10,4;UBERON:0009616,2.94e-10,4;UBERON:0010286,2.94e-10,4;UBERON:0002420,1.18e-09,8;UBERON:0007245,1.18e-09,8;UBERON:0010009,1.18e-09,8;UBERON:0010011,1.18e-09,8;UBERON:0000454,1.18e-09,8;UBERON:0004111,1.91e-09,122;UBERON:0002038,6.96e-08,3;UBERON:0009663,6.96e-08,3;UBERON:0009661,6.96e-08,3;UBERON:0000125,6.96e-08,3;UBERON:0002308,6.96e-08,3;UBERON:0004684,1.60e-07,3;UBERON:0002275,1.60e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0,0.630974884054146,0.285650984403804,0.441737081903227,0.61245399607477,0.0958454710182364,1.83843757322004,7.70811166995721,8.17198963745201,7.68032666281217,0.791317726381163,0.365950574409639,1.56274011167028,3.90856198601933,16.8828783009504,15.279824777681,3.53554302568401,2.84743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,23.8167116653668,7.32000964509802,2.76439574648302,16.339486098074,20.2015211290961,14.3373750746096,18.3332627266566,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,23.3421842906181,5.65975368086064,0,0,0,0,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8440471990234,14.417037450841,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0.441056796109924,0,0,0,0,0,0,12.2380699326936,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,13.3494318587081,10.8850147553485,7.21783365843488,8.90607275701835,10.5755145634558,6.75022500231806,7.65546045481175,9.5159905886683,6.73088405277366,0,0,0,0,0.209613162627982,1.2869045591501,0.888986911206461,0.618105171716683,1.28367683836726,0,1.01391719956096,0.188626341386076,0.280924522409647,0.768301828858431,0.976402972245426,0,0.347652977834566,0.578727661391115,1.23625770240992,0.294397840268795,0.342869252385415,1.06485483695602,0.238436189947321,0.581385666529314,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.474540072496697,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.467863216890817,1.07435527024149,0.382576664137687,0,0.463735671240843|short_description=p4@Map2k4}} | ||
|EntrezGene=26398 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENSMUST00000138093_5end | |||
|description=CAGE_peak_4_at_Map2k4_5end | |||
|id=chr11:65559354..65559382,- | |||
|ontology_enrichment_celltype=CL:0000117!6.28e-14!23;CL:0000337!6.28e-14!23;CL:0000540!1.50e-12!33;CL:0000047!1.50e-12!33;CL:0000031!1.50e-12!33;CL:0000404!1.50e-12!33;CL:0000393!2.05e-09!39;CL:0000211!2.05e-09!39;CL:0002319!7.49e-08!43;CL:0000221!1.64e-07!44;CL:0000133!1.64e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,6.96e-08,3;CL:0000117,7.99e-08,23;CL:0000337,7.99e-08,23;CL:0002610,1.60e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.20e-29!73;UBERON:0005743!7.20e-29!73;UBERON:0001049!2.65e-28!52;UBERON:0005068!2.65e-28!52;UBERON:0006241!2.65e-28!52;UBERON:0007135!2.65e-28!52;UBERON:0000955!8.56e-28!50;UBERON:0006238!8.56e-28!50;UBERON:0000073!1.34e-27!75;UBERON:0001016!1.34e-27!75;UBERON:0002616!7.58e-27!49;UBERON:0002020!9.48e-24!34;UBERON:0003080!6.31e-22!40;UBERON:0002780!8.15e-21!39;UBERON:0001890!8.15e-21!39;UBERON:0006240!8.15e-21!39;UBERON:0000033!8.28e-21!63;UBERON:0002791!1.52e-20!29;UBERON:0003528!1.52e-20!29;UBERON:0001893!1.52e-20!29;UBERON:0002346!3.08e-20!71;UBERON:0003075!3.08e-20!71;UBERON:0007284!3.08e-20!71;UBERON:0003056!1.44e-17!49;UBERON:0004121!6.73e-17!102;UBERON:0000924!6.73e-17!102;UBERON:0006601!6.73e-17!102;UBERON:0000956!1.22e-13!21;UBERON:0001869!1.22e-13!21;UBERON:0000203!1.22e-13!21;UBERON:0002619!2.18e-12!17;UBERON:0007811!2.15e-11!86;UBERON:0002021!3.48e-11!10;UBERON:0000411!3.48e-11!10;UBERON:0001950!3.48e-11!10;UBERON:0000153!2.68e-09!94;UBERON:0002420!3.35e-08!8;UBERON:0007245!3.35e-08!8;UBERON:0010009!3.35e-08!8;UBERON:0010011!3.35e-08!8;UBERON:0000454!3.35e-08!8;UBERON:0002298!7.68e-08!6;UBERON:0003076!7.58e-07!12;UBERON:0003057!7.58e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.00e-35,54;UBERON:0001049,2.04e-31,52;UBERON:0005068,2.04e-31,52;UBERON:0006241,2.04e-31,52;UBERON:0007135,2.04e-31,52;UBERON:0000955,2.80e-30,47;UBERON:0006238,2.80e-30,47;UBERON:0002616,1.22e-28,46;UBERON:0003080,4.04e-28,40;UBERON:0001017,8.32e-28,73;UBERON:0002020,1.39e-27,34;UBERON:0003528,2.51e-27,29;UBERON:0002791,2.51e-27,29;UBERON:0001893,2.51e-27,29;UBERON:0001016,7.28e-27,75;UBERON:0002780,3.92e-26,39;UBERON:0001890,3.92e-26,39;UBERON:0006240,3.92e-26,39;UBERON:0002346,3.16e-24,64;UBERON:0003075,3.16e-24,64;UBERON:0007284,3.16e-24,64;UBERON:0003056,7.37e-22,49;UBERON:0002021,1.46e-21,10;UBERON:0000411,1.46e-21,10;UBERON:0001950,1.46e-21,10;UBERON:0010371,2.19e-20,73;UBERON:0002619,2.67e-20,17;UBERON:0004121,1.27e-19,95;UBERON:0000924,1.27e-19,95;UBERON:0006601,1.27e-19,95;UBERON:0000956,9.68e-19,21;UBERON:0001869,9.68e-19,21;UBERON:0000203,9.68e-19,21;UBERON:0010314,9.46e-15,92;UBERON:0000025,1.39e-10,114;UBERON:0002950,2.94e-10,4;UBERON:0001891,2.94e-10,4;UBERON:0009616,2.94e-10,4;UBERON:0010286,2.94e-10,4;UBERON:0002420,1.18e-09,8;UBERON:0007245,1.18e-09,8;UBERON:0010009,1.18e-09,8;UBERON:0010011,1.18e-09,8;UBERON:0000454,1.18e-09,8;UBERON:0004111,1.91e-09,122;UBERON:0002038,6.96e-08,3;UBERON:0009663,6.96e-08,3;UBERON:0009661,6.96e-08,3;UBERON:0000125,6.96e-08,3;UBERON:0002308,6.96e-08,3;UBERON:0004684,1.60e-07,3;UBERON:0002275,1.60e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0,0.630974884054146,0.285650984403804,0.441737081903227,0.61245399607477,0.0958454710182364,1.83843757322004,7.70811166995721,8.17198963745201,7.68032666281217,0.791317726381163,0.365950574409639,1.56274011167028,3.90856198601933,16.8828783009504,15.279824777681,3.53554302568401,2.84743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,23.8167116653668,7.32000964509802,2.76439574648302,16.339486098074,20.2015211290961,14.3373750746096,18.3332627266566,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,23.3421842906181,5.65975368086064,0,0,0,0,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8440471990234,14.417037450841,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,4.81981974632711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0.441056796109924,0,0,0,0,0,0,12.2380699326936,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90652579663893,13.3494318587081,10.8850147553485,7.21783365843488,8.90607275701835,10.5755145634558,6.75022500231806,7.65546045481175,9.5159905886683,6.73088405277366,0,0,0,0,0.209613162627982,1.2869045591501,0.888986911206461,0.618105171716683,1.28367683836726,0,1.01391719956096,0.188626341386076,0.280924522409647,0.768301828858431,0.976402972245426,0,0.347652977834566,0.578727661391115,1.23625770240992,0.294397840268795,0.342869252385415,1.06485483695602,0.238436189947321,0.581385666529314,0.752875043322645,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.474540072496697,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.467863216890817,1.07435527024149,0.382576664137687,0,0.463735671240843 | |||
|short_description=p4@Map2k4 | |||
}} |
Revision as of 20:23, 12 September 2013
Short description: | p4@Map2k4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Map2k4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -14bp_to_ENSMUST00000138093_5end |
EntrezGene: | Map2k4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 6.96e-08 | 3 |
CNS neuron (sensu Vertebrata) | 7.99e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.99e-08 | 23 |
raphe nuclei neuron | 1.60e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.