FFCP PHASE1:Mm9::chr5:134932572..134932655,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57080|HGNC=|UniProt=Q9JI57,Q6PD35|association_with_transcript=0bp_to_ENSMUST00000073161,ENSMUST00000074114,ENSMUST00000100650,ENSMUST00000100652,ENSMUST00000100654,ENSMUST00000111245,ENSMUST00000167084,ENSMUST00000171794,NM_001081462,NM_001081463,NM_001081464,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_001244936,NM_020331,uc008zvu.1,uc008zvv.1,uc008zvw.1,uc008zvx.1,uc008zvy.1,uc008zvz.1,uc008zwa.1,uc008zwb.1,uc008zwc.1,uc008zwd.1,uc008zwe.1,uc008zwh.1_5end|description=CAGE_peak_1_at_Gtf2ird1_5end|id=chr5:134932572..134932655,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.34e-07!333;UBERON:0001444!6.56e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.06e-07,320;UBERON:0001444,6.55e-07,11|phase1_expression=7.20669811971573,9.42233600626275,11.3749809847384,10.8887116070459,14.5259761684441,5.70789524500425,4.43864017131499,1.03298658753261,2.81577444303333,2.57470978954193,0.34243593645101,0.398860794976682,1.54080656938085,0.961624426608971,3.66420737997229,1.61980213911861,2.09868563438444,1.57731082679119,0.822686601634433,0.42438965179803,5.10259740906419,2.58156473122302,1.82839852397255,2.07990149631429,3.21172993494038,8.03924749761028,1.7230479846363,6.67960821326256,3.23039813075836,4.03248207615889,2.88249663851896,0,0,0,6.06588401477677,5.98444723290572,6.53341940039581,1.25559489221072,0.7813353445238,0.523523743973798,3.52938892818609,3.41522742479223,3.39857247121808,7.67970589651021,7.50189291024408,10.8292583775392,7.82391344348039,5.66865406589161,6.81027166476863,6.80504646759992,4.4795654920116,5.75010257459886,0,6.5282592781021,1.34437519656986,4.63066984864705,9.16907007804022,6.70373719960675,15.578367486189,8.99284664762456,13.9442908771359,8.13226876965917,5.33576877666684,8.54904731417329,5.93319817540185,6.3943210345149,7.49000276296012,7.68436610643109,15.0349937847293,17.5507719831198,13.8814474491912,7.42692559449889,5.74258206474195,14.6988959057945,19.6483215587385,22.0612508786405,2.20231761998777,8.04430229936683,5.9906547969935,14.2437190748609,15.8273623432169,14.0646610050325,3.07101298901519,9.00420176050688,7.79271063661732,9.1334861496837,5.12538050876771,10.8111678578674,6.13382165998791,8.38844317185319,8.98579914975201,5.16254326188832,10.879541339324,2.69851595818909,3.89865850468601,3.58421509677868,6.17955448579708,6.81721290312231,4.1565760736459,3.5333957451034,8.30976176682415,7.69958864485907,5.09610479413291,14.2213340630666,4.76280290224671,8.86759529162845,13.1436355703844,4.79572294820052,3.10725460376606,8.46120192669501,7.63335437770998,7.91610243611567,8.30215790121811,7.83757730873637,11.170927177892,7.6656620711102,3.95511948374998,10.8449517689934,0.884610551949874,11.0001457964238,5.52103796150984,6.78825354389311,24.2309289583559,12.0040126774734,11.7290155815535,4.59822699375465,5.15205035375457,1.79970819298022,6.09937089950711,9.28701964309901,10.0650132620098,22.1151659718641,7.30062144807561,6.39288643325826,6.44142938134636,10.707923362472,13.7483141197927,5.59831367745419,4.80173241023982,13.4682787767343,23.1614388473613,13.3343220571414,17.4660265911189,18.9888070473001,28.1671106486497,20.8825364064305,31.6711829011883,27.4225572983357,16.5987354558289,16.0740168142646,12.3165786914764,9.86380795924087,10.2877482213471,12.8853301613202,5.35033554660653,9.35461054046918,4.91549231119264,3.08817488537658,5.11494298912067,12.6346721246656,10.5536726991493,9.90341338035582,12.7842157216014,13.3799677588235,9.41029388613007,11.39416329277,9.65784245038629,13.6615450569588,13.3293478429919,7.38753588355929,6.72871119230603,8.62579925809461,5.48875288227627,7.91817870686193,4.83666881697493,11.8340304236177,11.5646574044329,7.1401652999157,11.9441420299731,11.3795969211615,11.9846739029547,10.4875432804138,12.6755484991576,8.94060442729028,2.84717436926707,10.5407331023367,11.3100843960121,12.9321706826748,10.9179888786707,10.7858329038507,8.64552199498777,10.3553462092271,5.87970492954553,7.99739588268102,9.01661885384643,9.36796108088446,7.95205197387266,13.4660774189412,8.66340558602325,8.11855813887812,6.75094529717912,8.51440431060424,7.11486305009157,4.83850806576673,5.89676985339609,5.17182858485164,5.47722327748958,5.06472035480075,4.83789118384698,5.4662266115654,6.97181475132652,4.94210543738547,20.1275489138296,8.93138274404408,10.6092808858951,3.53610429125956,5.56131981917928,9.16642690590398,6.46636165583116,6.253216588426,10.9186534216157,9.67546988918572,13.6120344007331,11.3904255060435,9.99783291721258,16.1960927721973,12.6108115284953,19.710357378741,17.6994793209811,10.1595255123758,7.59813920209941,8.82359257347221,3.01582567878545,2.71952841909355,4.42587845717133,6.07060841870411,6.26147300952389,5.50894926983355,3.93443868904021,11.3611917241968,9.14973836307144,11.3227235846025,10.3403230911743,12.1874086955802,14.2591151412732,14.153826539441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| ||
|EntrezGene=57080 | |||
|HGNC= | |||
|UniProt=Q9JI57,Q6PD35 | |||
|association_with_transcript=0bp_to_ENSMUST00000073161,ENSMUST00000074114,ENSMUST00000100650,ENSMUST00000100652,ENSMUST00000100654,ENSMUST00000111245,ENSMUST00000167084,ENSMUST00000171794,NM_001081462,NM_001081463,NM_001081464,NM_001081466,NM_001081467,NM_001081468,NM_001081469,NM_001081470,NM_001244936,NM_020331,uc008zvu.1,uc008zvv.1,uc008zvw.1,uc008zvx.1,uc008zvy.1,uc008zvz.1,uc008zwa.1,uc008zwb.1,uc008zwc.1,uc008zwd.1,uc008zwe.1,uc008zwh.1_5end | |||
|description=CAGE_peak_1_at_Gtf2ird1_5end | |||
|id=chr5:134932572..134932655,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.34e-07!333;UBERON:0001444!6.56e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.06e-07,320;UBERON:0001444,6.55e-07,11 | |||
|phase1_expression=7.20669811971573,9.42233600626275,11.3749809847384,10.8887116070459,14.5259761684441,5.70789524500425,4.43864017131499,1.03298658753261,2.81577444303333,2.57470978954193,0.34243593645101,0.398860794976682,1.54080656938085,0.961624426608971,3.66420737997229,1.61980213911861,2.09868563438444,1.57731082679119,0.822686601634433,0.42438965179803,5.10259740906419,2.58156473122302,1.82839852397255,2.07990149631429,3.21172993494038,8.03924749761028,1.7230479846363,6.67960821326256,3.23039813075836,4.03248207615889,2.88249663851896,0,0,0,6.06588401477677,5.98444723290572,6.53341940039581,1.25559489221072,0.7813353445238,0.523523743973798,3.52938892818609,3.41522742479223,3.39857247121808,7.67970589651021,7.50189291024408,10.8292583775392,7.82391344348039,5.66865406589161,6.81027166476863,6.80504646759992,4.4795654920116,5.75010257459886,0,6.5282592781021,1.34437519656986,4.63066984864705,9.16907007804022,6.70373719960675,15.578367486189,8.99284664762456,13.9442908771359,8.13226876965917,5.33576877666684,8.54904731417329,5.93319817540185,6.3943210345149,7.49000276296012,7.68436610643109,15.0349937847293,17.5507719831198,13.8814474491912,7.42692559449889,5.74258206474195,14.6988959057945,19.6483215587385,22.0612508786405,2.20231761998777,8.04430229936683,5.9906547969935,14.2437190748609,15.8273623432169,14.0646610050325,3.07101298901519,9.00420176050688,7.79271063661732,9.1334861496837,5.12538050876771,10.8111678578674,6.13382165998791,8.38844317185319,8.98579914975201,5.16254326188832,10.879541339324,2.69851595818909,3.89865850468601,3.58421509677868,6.17955448579708,6.81721290312231,4.1565760736459,3.5333957451034,8.30976176682415,7.69958864485907,5.09610479413291,14.2213340630666,4.76280290224671,8.86759529162845,13.1436355703844,4.79572294820052,3.10725460376606,8.46120192669501,7.63335437770998,7.91610243611567,8.30215790121811,7.83757730873637,11.170927177892,7.6656620711102,3.95511948374998,10.8449517689934,0.884610551949874,11.0001457964238,5.52103796150984,6.78825354389311,24.2309289583559,12.0040126774734,11.7290155815535,4.59822699375465,5.15205035375457,1.79970819298022,6.09937089950711,9.28701964309901,10.0650132620098,22.1151659718641,7.30062144807561,6.39288643325826,6.44142938134636,10.707923362472,13.7483141197927,5.59831367745419,4.80173241023982,13.4682787767343,23.1614388473613,13.3343220571414,17.4660265911189,18.9888070473001,28.1671106486497,20.8825364064305,31.6711829011883,27.4225572983357,16.5987354558289,16.0740168142646,12.3165786914764,9.86380795924087,10.2877482213471,12.8853301613202,5.35033554660653,9.35461054046918,4.91549231119264,3.08817488537658,5.11494298912067,12.6346721246656,10.5536726991493,9.90341338035582,12.7842157216014,13.3799677588235,9.41029388613007,11.39416329277,9.65784245038629,13.6615450569588,13.3293478429919,7.38753588355929,6.72871119230603,8.62579925809461,5.48875288227627,7.91817870686193,4.83666881697493,11.8340304236177,11.5646574044329,7.1401652999157,11.9441420299731,11.3795969211615,11.9846739029547,10.4875432804138,12.6755484991576,8.94060442729028,2.84717436926707,10.5407331023367,11.3100843960121,12.9321706826748,10.9179888786707,10.7858329038507,8.64552199498777,10.3553462092271,5.87970492954553,7.99739588268102,9.01661885384643,9.36796108088446,7.95205197387266,13.4660774189412,8.66340558602325,8.11855813887812,6.75094529717912,8.51440431060424,7.11486305009157,4.83850806576673,5.89676985339609,5.17182858485164,5.47722327748958,5.06472035480075,4.83789118384698,5.4662266115654,6.97181475132652,4.94210543738547,20.1275489138296,8.93138274404408,10.6092808858951,3.53610429125956,5.56131981917928,9.16642690590398,6.46636165583116,6.253216588426,10.9186534216157,9.67546988918572,13.6120344007331,11.3904255060435,9.99783291721258,16.1960927721973,12.6108115284953,19.710357378741,17.6994793209811,10.1595255123758,7.59813920209941,8.82359257347221,3.01582567878545,2.71952841909355,4.42587845717133,6.07060841870411,6.26147300952389,5.50894926983355,3.93443868904021,11.3611917241968,9.14973836307144,11.3227235846025,10.3403230911743,12.1874086955802,14.2591151412732,14.1538265394416,12.9539424535966,9.9366991689846,14.6256477840214,11.2462460747632,8.23252494207958,8.19101776869374,14.3340524231147,8.41347627159931,5.30980553359851,8.25454162926937,7.86041248108353,6.03536255218874,7.38254732201932,7.99331384654211,9.04499026088774,6.90714086007261,4.63446591900138,4.74055136903724,5.27093042874994,4.12542172992747,28.2564872775644,18.9064148732876,25.4836607052026,24.6487590286331,21.9901889716419,27.825535545923,24.1887060285118,31.6643547079183,3.05073220482823,3.81297727554876,3.74898276693435,6.76033637060068,12.9171541356724,10.8563264870681,7.87857470420701,8.37118588699812,6.41257840585672,6.11903496634682,3.07567585436135,8.04908785056568,4.25947412950337,2.82552685507037,2.7338845544205,3.43167259809784,14.4481665494777,15.534611207926,16.1693969351176,8.59203556213602,17.0821436533813,15.6555989687673,17.928886576419,17.9815934572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| |||
|short_description=p1@Gtf2ird1 | |||
}} | |||
Revision as of 06:36, 14 September 2013
| Short description: | p1@Gtf2ird1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gtf2ird1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000073161, ENSMUST00000074114, ENSMUST00000100650, ENSMUST00000100652, ENSMUST00000100654, ENSMUST00000111245, ENSMUST00000167084, ENSMUST00000171794, NM_001081462, NM_001081463, NM_001081464, NM_001081466, NM_001081467, NM_001081468, NM_001081469, NM_001081470, NM_001244936, NM_020331, uc008zvu.1, uc008zvv.1, uc008zvw.1, uc008zvx.1, uc008zvy.1, uc008zvz.1, uc008zwa.1, uc008zwb.1, uc008zwc.1, uc008zwd.1, uc008zwe.1, uc008zwh.1_5end |
| EntrezGene: | Gtf2ird1 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryo | 4.06e-07 | 320 |
| subdivision of head | 6.55e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
