FFCP PHASE1:Mm9::chr18:11052516..11052525,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14465|HGNC=|MCL_coexpression_id=2230|UniProt=Q61169,Q9JMA3|association_with_transcript=8bp_to_ENSMUST00000047762,NM_010258,uc008ebj.1,uc008ebk.1_5end|description=CAGE_peak_5_at_Gata6_5end|id=chr18:11052516..11052525,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!4.05e-15!23;UBERON:0001009!4.05e-15!23;UBERON:0007100!2.12e-13!18;UBERON:0000948!2.12e-13!18;UBERON:0005498!2.12e-13!18;UBERON:0004140!2.12e-13!18;UBERON:0009881!2.12e-13!18;UBERON:0004141!2.12e-13!18;UBERON:0003084!2.12e-13!18;UBERON:0007005!2.12e-13!18;UBERON:0004139!2.12e-13!18;UBERON:0004291!2.12e-13!18;UBERON:0000160!2.50e-13!43;UBERON:0005409!2.51e-13!59;UBERON:0004872!8.82e-11!33;UBERON:0003914!2.70e-08!47;UBERON:0001007!6.42e-07!128;UBERON:0001555!6.42e-07!128;UBERON:0007026!6.42e-07!128;UBERON:0004921!9.40e-07!126;UBERON:0004185!9.40e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.13e-27,18;UBERON:0000948,1.13e-27,18;UBERON:0005498,1.13e-27,18;UBERON:0004140,1.13e-27,18;UBERON:0009881,1.13e-27,18;UBERON:0004141,1.13e-27,18;UBERON:0003084,1.13e-27,18;UBERON:0007005,1.13e-27,18;UBERON:0004139,1.13e-27,18;UBERON:0004291,1.13e-27,18;UBERON:0004535,2.34e-25,23;UBERON:0001009,2.34e-25,23;UBERON:0004872,7.35e-18,33;UBERON:0003914,4.91e-12,47;UBERON:0003103,6.24e-10,43;UBERON:0000160,2.10e-09,31|phase1_expression=0,2.79180326111489,0.454999239389536,3.62957053568196,2.50447864973174,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,1.14846392823004,1.7230479846363,0.215471232685889,0.380046838912748,0.756090389279792,0,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0.503587271902309,1.72340783073175,0.550640256485045,0,0,0,0,0,0,0,0,0,1.54355661621568,1.43266719969378,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,2.22663208597237,1.04091196059682,0.913396434936424,2.07553947530453,0.904335843315735,1.17588707135705,2.63899841792318,0.741584903203122,1.01219549843938,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.83310854930569,0,0,3.99839526184301,0,0,0,0.150704817835715,0,0,0,1.55222022443409,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,1.44988040774851,1.87620847984877,1.62055855314913,1.89395788468168,2.16440654922144,3.23960937063494,3.0229412817553,2.41446061259657,2.33530684734339,2.46839774870221,1.80584210487005,2.26992666728396,2.33919979880532,1.53685080703735,1.34206418760372,0,0,3.63460661282178,2.3800550999719,0.853153002140936,0.464473343720877,0.257734922644187,1.4117846723634,1.33426826306922,1.33157938278791,1.42358718463353,2.63518327558417,2.5133520880027,1.98956472041151,1.9496408711912,0,0.216138049874694,1.7922714592893,0.569003702859245,0.571242563048644,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.651859905768103,0.509235257325564,0.704070744865506,1.17254380209271,0,1.17080188714679,0.157635144106191,0.44292937929755,0.797273843287435,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,1.95872164033981,1.62886959353576,0.494910368917606,1.32745138339963,0.242780636154981,0.906970670894253,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.238744688006273,0.328281799490123,2.62332752966866,0,0,0.412773735926445,0.370389054739423,0.376736914009382,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.432021363287205,0,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.129614973291793,0,0,1.49516546043979,0,1.75006069509643,0.774958940866387,0.844780627453891,0.469428954583016,1.5624526181274,0.314578033277133,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.229741875822453,0,0.463537303779422,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.476872379894642,0.145346416632329,0,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0,0,0.467863216890817,0.644613162144895,0.191288332068843,0,0|short_description=p5@Gata6}} | ||
|EntrezGene=14465 | |||
|HGNC= | |||
|MCL_coexpression_id=2230 | |||
|UniProt=Q61169,Q9JMA3 | |||
|association_with_transcript=8bp_to_ENSMUST00000047762,NM_010258,uc008ebj.1,uc008ebk.1_5end | |||
|description=CAGE_peak_5_at_Gata6_5end | |||
|id=chr18:11052516..11052525,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!4.05e-15!23;UBERON:0001009!4.05e-15!23;UBERON:0007100!2.12e-13!18;UBERON:0000948!2.12e-13!18;UBERON:0005498!2.12e-13!18;UBERON:0004140!2.12e-13!18;UBERON:0009881!2.12e-13!18;UBERON:0004141!2.12e-13!18;UBERON:0003084!2.12e-13!18;UBERON:0007005!2.12e-13!18;UBERON:0004139!2.12e-13!18;UBERON:0004291!2.12e-13!18;UBERON:0000160!2.50e-13!43;UBERON:0005409!2.51e-13!59;UBERON:0004872!8.82e-11!33;UBERON:0003914!2.70e-08!47;UBERON:0001007!6.42e-07!128;UBERON:0001555!6.42e-07!128;UBERON:0007026!6.42e-07!128;UBERON:0004921!9.40e-07!126;UBERON:0004185!9.40e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.13e-27,18;UBERON:0000948,1.13e-27,18;UBERON:0005498,1.13e-27,18;UBERON:0004140,1.13e-27,18;UBERON:0009881,1.13e-27,18;UBERON:0004141,1.13e-27,18;UBERON:0003084,1.13e-27,18;UBERON:0007005,1.13e-27,18;UBERON:0004139,1.13e-27,18;UBERON:0004291,1.13e-27,18;UBERON:0004535,2.34e-25,23;UBERON:0001009,2.34e-25,23;UBERON:0004872,7.35e-18,33;UBERON:0003914,4.91e-12,47;UBERON:0003103,6.24e-10,43;UBERON:0000160,2.10e-09,31 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,3.62957053568196,2.50447864973174,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,1.14846392823004,1.7230479846363,0.215471232685889,0.380046838912748,0.756090389279792,0,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0.503587271902309,1.72340783073175,0.550640256485045,0,0,0,0,0,0,0,0,0,1.54355661621568,1.43266719969378,3.6097046459421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.579728977403356,0,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,2.22663208597237,1.04091196059682,0.913396434936424,2.07553947530453,0.904335843315735,1.17588707135705,2.63899841792318,0.741584903203122,1.01219549843938,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.83310854930569,0,0,3.99839526184301,0,0,0,0.150704817835715,0,0,0,1.55222022443409,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,1.44988040774851,1.87620847984877,1.62055855314913,1.89395788468168,2.16440654922144,3.23960937063494,3.0229412817553,2.41446061259657,2.33530684734339,2.46839774870221,1.80584210487005,2.26992666728396,2.33919979880532,1.53685080703735,1.34206418760372,0,0,3.63460661282178,2.3800550999719,0.853153002140936,0.464473343720877,0.257734922644187,1.4117846723634,1.33426826306922,1.33157938278791,1.42358718463353,2.63518327558417,2.5133520880027,1.98956472041151,1.9496408711912,0,0.216138049874694,1.7922714592893,0.569003702859245,0.571242563048644,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.651859905768103,0.509235257325564,0.704070744865506,1.17254380209271,0,1.17080188714679,0.157635144106191,0.44292937929755,0.797273843287435,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,1.95872164033981,1.62886959353576,0.494910368917606,1.32745138339963,0.242780636154981,0.906970670894253,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.238744688006273,0.328281799490123,2.62332752966866,0,0,0.412773735926445,0.370389054739423,0.376736914009382,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.432021363287205,0,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.129614973291793,0,0,1.49516546043979,0,1.75006069509643,0.774958940866387,0.844780627453891,0.469428954583016,1.5624526181274,0.314578033277133,0.241584120826006,0.288030006257865,0,0.405450430580328,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.772758376128762,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,1.19707462020309,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.192075457214608,0.229741875822453,0,0.463537303779422,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.476872379894642,0.145346416632329,0,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0,0,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p5@Gata6 | |||
}} |
Revision as of 15:41, 13 September 2013
Short description: | p5@Gata6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gata6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2230 |
Association with transcript: | 8bp_to_ENSMUST00000047762, NM_010258, uc008ebj.1, uc008ebk.1_5end |
EntrezGene: | Gata6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.13e-27 | 18 |
heart | 1.13e-27 | 18 |
primitive heart tube | 1.13e-27 | 18 |
primary heart field | 1.13e-27 | 18 |
anterior lateral plate mesoderm | 1.13e-27 | 18 |
heart tube | 1.13e-27 | 18 |
heart primordium | 1.13e-27 | 18 |
cardiac mesoderm | 1.13e-27 | 18 |
cardiogenic plate | 1.13e-27 | 18 |
heart rudiment | 1.13e-27 | 18 |
cardiovascular system | 2.34e-25 | 23 |
circulatory system | 2.34e-25 | 23 |
splanchnic layer of lateral plate mesoderm | 7.35e-18 | 33 |
epithelial tube | 4.91e-12 | 47 |
compound organ | 6.24e-10 | 43 |
intestine | 2.10e-09 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.