FFCP PHASE1:Mm9::chr10:128338020..128338031,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=97|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:128338020..128338031,+|id=chr10:128338020..128338031,+|ontology_enrichment_celltype=CL:0000349!1.16e-10!3;CL:0000351!1.16e-10!3|ontology_enrichment_celltype_v019_2=CL:0000349,4.74e-34,3;CL:0000351,4.74e-34,3|ontology_enrichment_disease=DOID:0060100!6.18e-10!3;DOID:4045!6.18e-10!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!1.16e-10!3;UBERON:0000307!1.16e-10!3;UBERON:0005631!5.39e-10!3;UBERON:0000478!5.39e-10!3;UBERON:0000158!5.39e-10!3;UBERON:0001987!1.62e-07!2;UBERON:0003124!1.62e-07!2;UBERON:0004340!1.62e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.74e-34,3;UBERON:0000307,4.74e-34,3;UBERON:0007010,4.74e-34,3;UBERON:0001987,8.47e-23,2;UBERON:0003124,8.47e-23,2;UBERON:0004340,8.47e-23,2;UBERON:0005631,1.46e-15,3;UBERON:0000478,1.46e-15,3;UBERON:0000158,1.46e-15,3;UBERON:0005795,6.31e-12,4;UBERON:0000995,6.31e-12,4;UBERON:0003975,9.83e-10,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,1.17646297606203,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,2.54198485036584,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,1.77588762699252,5.02397597013064,3.02192309455341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:128338020..128338031,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:128338020..128338031,+ | |||
|id=chr10:128338020..128338031,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.16e-10!3;CL:0000351!1.16e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.74e-34,3;CL:0000351,4.74e-34,3 | |||
|ontology_enrichment_disease=DOID:0060100!6.18e-10!3;DOID:4045!6.18e-10!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!1.16e-10!3;UBERON:0000307!1.16e-10!3;UBERON:0005631!5.39e-10!3;UBERON:0000478!5.39e-10!3;UBERON:0000158!5.39e-10!3;UBERON:0001987!1.62e-07!2;UBERON:0003124!1.62e-07!2;UBERON:0004340!1.62e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,4.74e-34,3;UBERON:0000307,4.74e-34,3;UBERON:0007010,4.74e-34,3;UBERON:0001987,8.47e-23,2;UBERON:0003124,8.47e-23,2;UBERON:0004340,8.47e-23,2;UBERON:0005631,1.46e-15,3;UBERON:0000478,1.46e-15,3;UBERON:0000158,1.46e-15,3;UBERON:0005795,6.31e-12,4;UBERON:0000995,6.31e-12,4;UBERON:0003975,9.83e-10,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,1.17646297606203,1.36609096991689,0.971020706062307,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,2.54198485036584,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,1.77588762699252,5.02397597013064,3.02192309455341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:128338020..128338031,+ | |||
}} |
Revision as of 16:13, 12 September 2013
Short description: | p@chr10:128338020..128338031, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128338020..128338031, + |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.74e-34 | 3 |
trophoblast cell | 4.74e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 4.74e-34 | 3 |
blastula | 4.74e-34 | 3 |
cleaving embryo | 4.74e-34 | 3 |
placenta | 8.47e-23 | 2 |
chorion | 8.47e-23 | 2 |
allantois | 8.47e-23 | 2 |
extraembryonic membrane | 1.46e-15 | 3 |
extraembryonic structure | 1.46e-15 | 3 |
membranous layer | 1.46e-15 | 3 |
embryonic uterus | 6.31e-12 | 4 |
uterus | 6.31e-12 | 4 |
internal female genitalia | 9.83e-10 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.