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FFCP PHASE1:Mm9::chr11:51506964..51506968,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=461|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:51506964..51506968,-|id=chr11:51506964..51506968,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,9.30e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.47e-09!130;UBERON:0000925!1.47e-09!130;UBERON:0006595!1.47e-09!130;UBERON:0001007!5.49e-09!128;UBERON:0001555!5.49e-09!128;UBERON:0007026!5.49e-09!128;UBERON:0004921!3.30e-08!126;UBERON:0004185!3.30e-08!126;UBERON:0005409!9.65e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-15,22;UBERON:0007499,2.64e-15,22;UBERON:0006925,2.64e-15,22;UBERON:0009497,2.64e-15,22;UBERON:0000015,2.64e-15,22;UBERON:0002423,2.64e-15,22;UBERON:0006235,2.64e-15,22;UBERON:0008835,2.64e-15,22;UBERON:0003894,2.64e-15,22;UBERON:0004161,2.64e-15,22;UBERON:0008836,2.64e-15,22;UBERON:0009854,1.66e-14,23;UBERON:0009856,1.66e-14,23;UBERON:0004119,6.68e-14,118;UBERON:0000925,6.68e-14,118;UBERON:0006595,6.68e-14,118;UBERON:0001007,3.66e-13,116;UBERON:0001555,3.66e-13,116;UBERON:0007026,3.66e-13,116;UBERON:0002365,4.21e-13,25;UBERON:0002330,4.21e-13,25;UBERON:0004921,2.48e-11,114;UBERON:0000160,1.37e-09,31;UBERON:0005256,2.85e-09,45;UBERON:0005172,3.18e-08,49;UBERON:0005173,3.18e-08,49;UBERON:0002417,3.18e-08,49;UBERON:0000916,3.18e-08,49;UBERON:0009569,8.01e-07,66;UBERON:0003104,8.64e-07,61;UBERON:0009142,8.64e-07,61|phase1_expression=0.80074423552397,0.348975407639361,1.81999695755814,0.30246421130683,0.500895729946347,0,0,0.774739940649458,0.281577444303333,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0.274228867211478,0,0.17008658030214,0.198581902401771,0,1.43993180514066,1.60586496747019,2.8711598205751,0.86152399231815,1.07735616342945,1.52018735565099,1.51218077855958,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0.677689064138264,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.630974884054146,0.571301968807607,0,0.244981598429908,0.191690942036473,0,0,0,0.153606533256243,0,0.182975287204819,0.52091337055676,0,0.56276261003168,0.30559649555362,0,0.569486723196412,0.559198337475902,0.37863096666592,0,0,0,2.719885334831,4.31762553310254,1.29955283489534,1.34408066129201,0.561777680527007,0,0.259786004602869,0,0.845060518660083,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,2.05530983494308,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0,0,0.485300549842228,0,0,0,0,0.41889341362691,1.02182822083437,0.239630249011841,0,0.889491589511453,0,0,0,0,0.511430914660661,0,0,0.305518091550949,0.622034853050465,1.26361379216837,0.210441855886474,0.130120442962704,0.229902104433473,0,0.60281927134286,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0.284163499395593,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0,0.268273401399619,0.233530684734339,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0,0,0,0.308713837137853,2.97376904685418,0.528901133327089,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.667134131534611,0,1.42358718463353,1.64698954724011,1.00534083520108,0.596869416123452,2.14460495831032,1.79763881730844,2.16138049874694,1.7922714592893,0,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.420814919341911,0.379419222745544,0.147610147979602,0.31399745568275,0.123397163921801,1.77871576252289,0,0,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,1.29708181420028,2.19649130550465,8.62609239164127,1.86070473834252,1.24815069245824,2.27320990152401,1.4351793081753,1.92977408545347,0.554259570499814,0.189491411770485,0,0.169745085775188,0.704070744865506,0,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0.327869890753351,0.757412781613119,0.631016438832513,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,2.10837217149998,0,0.340439605753788,0,0.129358683782755,0.643011105094777,0,0.178368817602071,0.658196082408484,0,0.469343416127421,1.27099242518292,1.10264199027481,0,0.322928853391811,0.0603129249281559,0.477489376012546,0,1.7488850197791,0.18542530201051,0.170870880797853,0.206386867963223,0,0.376736914009382,0,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,2.86401185404534,0.158167996790568,0.406638934253697,0.648032044930808,0.627264888043406,0.87345025498471,0.674321731924103,0.330613822901344,0.523511883968059,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0.496375471371293,0,0,0.506868376472335,0.352071715937262,0.13020438484395,0.209718688851422,0.483168241652012,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.0762068066549998,0,0,0.481059208201647,0.233753804363138,0.226730383615211,0,0.448569283047378,0.335769232728157,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.415149390336707,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0,1.71434626192708,0.354951612318675,0.953744759789284,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p@chr11:51506964..51506968,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=461
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr11:51506964..51506968,-
|id=chr11:51506964..51506968,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,9.30e-08,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.47e-09!130;UBERON:0000925!1.47e-09!130;UBERON:0006595!1.47e-09!130;UBERON:0001007!5.49e-09!128;UBERON:0001555!5.49e-09!128;UBERON:0007026!5.49e-09!128;UBERON:0004921!3.30e-08!126;UBERON:0004185!3.30e-08!126;UBERON:0005409!9.65e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.64e-15,22;UBERON:0007499,2.64e-15,22;UBERON:0006925,2.64e-15,22;UBERON:0009497,2.64e-15,22;UBERON:0000015,2.64e-15,22;UBERON:0002423,2.64e-15,22;UBERON:0006235,2.64e-15,22;UBERON:0008835,2.64e-15,22;UBERON:0003894,2.64e-15,22;UBERON:0004161,2.64e-15,22;UBERON:0008836,2.64e-15,22;UBERON:0009854,1.66e-14,23;UBERON:0009856,1.66e-14,23;UBERON:0004119,6.68e-14,118;UBERON:0000925,6.68e-14,118;UBERON:0006595,6.68e-14,118;UBERON:0001007,3.66e-13,116;UBERON:0001555,3.66e-13,116;UBERON:0007026,3.66e-13,116;UBERON:0002365,4.21e-13,25;UBERON:0002330,4.21e-13,25;UBERON:0004921,2.48e-11,114;UBERON:0000160,1.37e-09,31;UBERON:0005256,2.85e-09,45;UBERON:0005172,3.18e-08,49;UBERON:0005173,3.18e-08,49;UBERON:0002417,3.18e-08,49;UBERON:0000916,3.18e-08,49;UBERON:0009569,8.01e-07,66;UBERON:0003104,8.64e-07,61;UBERON:0009142,8.64e-07,61
|phase1_expression=0.80074423552397,0.348975407639361,1.81999695755814,0.30246421130683,0.500895729946347,0,0,0.774739940649458,0.281577444303333,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0.274228867211478,0,0.17008658030214,0.198581902401771,0,1.43993180514066,1.60586496747019,2.8711598205751,0.86152399231815,1.07735616342945,1.52018735565099,1.51218077855958,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0.336093799142464,0.514518872071894,0.286533439938757,0.515672092277442,0.606949382578793,0,0,0.677689064138264,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.630974884054146,0.571301968807607,0,0.244981598429908,0.191690942036473,0,0,0,0.153606533256243,0,0.182975287204819,0.52091337055676,0,0.56276261003168,0.30559649555362,0,0.569486723196412,0.559198337475902,0.37863096666592,0,0,0,2.719885334831,4.31762553310254,1.29955283489534,1.34408066129201,0.561777680527007,0,0.259786004602869,0,0.845060518660083,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,2.05530983494308,0,0.148442139064825,0.346970653532272,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0,0,0.485300549842228,0,0,0,0,0.41889341362691,1.02182822083437,0.239630249011841,0,0.889491589511453,0,0,0,0,0.511430914660661,0,0,0.305518091550949,0.622034853050465,1.26361379216837,0.210441855886474,0.130120442962704,0.229902104433473,0,0.60281927134286,0.136072998302656,0.12811372028485,0.281105173679186,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0.284163499395593,0,0,0.180062061461015,0.473489471170421,0.393528463494808,0.308534225774757,0,0.268273401399619,0.233530684734339,0.16455984991348,0.820837320395476,0.243206428637567,0.146199987425332,0,0,0,0.308713837137853,2.97376904685418,0.528901133327089,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.667134131534611,0,1.42358718463353,1.64698954724011,1.00534083520108,0.596869416123452,2.14460495831032,1.79763881730844,2.16138049874694,1.7922714592893,0,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.420814919341911,0.379419222745544,0.147610147979602,0.31399745568275,0.123397163921801,1.77871576252289,0,0,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,1.29708181420028,2.19649130550465,8.62609239164127,1.86070473834252,1.24815069245824,2.27320990152401,1.4351793081753,1.92977408545347,0.554259570499814,0.189491411770485,0,0.169745085775188,0.704070744865506,0,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.863424909329478,0.433947175744535,0,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0.327869890753351,0.757412781613119,0.631016438832513,0,0.646270193198397,0,0,0,0,0.292255857911312,0.395287777946524,0,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,2.10837217149998,0,0.340439605753788,0,0.129358683782755,0.643011105094777,0,0.178368817602071,0.658196082408484,0,0.469343416127421,1.27099242518292,1.10264199027481,0,0.322928853391811,0.0603129249281559,0.477489376012546,0,1.7488850197791,0.18542530201051,0.170870880797853,0.206386867963223,0,0.376736914009382,0,0.457556346413045,0.169978429993855,0.279902904647316,0.276399947608848,2.86401185404534,0.158167996790568,0.406638934253697,0.648032044930808,0.627264888043406,0.87345025498471,0.674321731924103,0.330613822901344,0.523511883968059,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0.496375471371293,0,0,0.506868376472335,0.352071715937262,0.13020438484395,0.209718688851422,0.483168241652012,0.288030006257865,0,0.405450430580328,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.0762068066549998,0,0,0.481059208201647,0.233753804363138,0.226730383615211,0,0.448569283047378,0.335769232728157,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.415149390336707,0,0,0.243106717068294,0,0.183843508450014,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0,1.71434626192708,0.354951612318675,0.953744759789284,0.145346416632329,0.376437521661322,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0
|short_description=p@chr11:51506964..51506968,-
}}

Revision as of 19:52, 12 September 2013

Short description:p@chr11:51506964..51506968, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:51506964..51506968, -
Coexpression cluster:MCL_coexpression_mm9:461
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr11:51506964..51506968-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte9.30e-085

Uber anatomy
Ontology termp-valuen
liver2.64e-1522
epithelial sac2.64e-1522
digestive gland2.64e-1522
epithelium of foregut-midgut junction2.64e-1522
anatomical boundary2.64e-1522
hepatobiliary system2.64e-1522
foregut-midgut junction2.64e-1522
hepatic diverticulum2.64e-1522
liver primordium2.64e-1522
septum transversum2.64e-1522
liver bud2.64e-1522
digestive tract diverticulum1.66e-1423
sac1.66e-1423
endoderm-derived structure6.68e-14118
endoderm6.68e-14118
presumptive endoderm6.68e-14118
digestive system3.66e-13116
digestive tract3.66e-13116
primitive gut3.66e-13116
exocrine gland4.21e-1325
exocrine system4.21e-1325
subdivision of digestive tract2.48e-11114
intestine1.37e-0931
trunk mesenchyme2.85e-0945
abdomen element3.18e-0849
abdominal segment element3.18e-0849
abdominal segment of trunk3.18e-0849
abdomen3.18e-0849
subdivision of trunk8.01e-0766
mesenchyme8.64e-0761
entire embryonic mesenchyme8.64e-0761







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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