FFCP PHASE1:Mm9::chr15:58655026..58655037,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74868|HGNC=|UniProt=Q4VAE3|association_with_transcript=-44bp_to_NM_175212,uc007vto.1_5end|description=CAGE_peak_3_at_Tmem65_5end|id=chr15:58655026..58655037,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.31e-09!102;UBERON:0000924!3.31e-09!102;UBERON:0006601!3.31e-09!102;UBERON:0004111!7.90e-09!122;UBERON:0000073!3.10e-08!75;UBERON:0001016!3.10e-08!75;UBERON:0000025!3.63e-08!114;UBERON:0001017!4.17e-08!73;UBERON:0005743!4.17e-08!73;UBERON:0001049!1.32e-07!52;UBERON:0005068!1.32e-07!52;UBERON:0006241!1.32e-07!52;UBERON:0007135!1.32e-07!52;UBERON:0004535!3.22e-07!23;UBERON:0001009!3.22e-07!23;UBERON:0007100!4.75e-07!18;UBERON:0000948!4.75e-07!18;UBERON:0005498!4.75e-07!18;UBERON:0004140!4.75e-07!18;UBERON:0009881!4.75e-07!18;UBERON:0004141!4.75e-07!18;UBERON:0003084!4.75e-07!18;UBERON:0007005!4.75e-07!18;UBERON:0004139!4.75e-07!18;UBERON:0004291!4.75e-07!18;UBERON:0002346!5.33e-07!71;UBERON:0003075!5.33e-07!71;UBERON:0007284!5.33e-07!71;UBERON:0000033!5.80e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.39e-13,92;UBERON:0004121,1.51e-09,95;UBERON:0000924,1.51e-09,95;UBERON:0006601,1.51e-09,95;UBERON:0010371,4.91e-09,73;UBERON:0004111,8.52e-09,122;UBERON:0001016,2.93e-08,75;UBERON:0000025,3.93e-08,114;UBERON:0001017,3.95e-08,73;UBERON:0001049,1.26e-07,52;UBERON:0005068,1.26e-07,52;UBERON:0006241,1.26e-07,52;UBERON:0007135,1.26e-07,52;UBERON:0002346,1.98e-07,64;UBERON:0003075,1.98e-07,64;UBERON:0007284,1.98e-07,64;UBERON:0000073,2.26e-07,54;UBERON:0004535,3.07e-07,23;UBERON:0001009,3.07e-07,23;UBERON:0007100,4.54e-07,18;UBERON:0000948,4.54e-07,18;UBERON:0005498,4.54e-07,18;UBERON:0004140,4.54e-07,18;UBERON:0009881,4.54e-07,18;UBERON:0004141,4.54e-07,18;UBERON:0003084,4.54e-07,18;UBERON:0007005,4.54e-07,18;UBERON:0004139,4.54e-07,18;UBERON:0004291,4.54e-07,18|phase1_expression=3.20297694209588,1.04692622291808,1.81999695755814,0,0.500895729946347,1.00727563147134,2.10251376535973,1.67860320474049,0.84473233291,1.63845168425395,0.513653904676515,0.638177271962691,0.684802919724823,0.961624426608971,0.999329285446988,0.607425802169478,0,0.946386496074713,0.548457734422955,0,1.87095238332354,0.695036658406197,0,1.27993938234725,0.68822784320151,2.29692785646008,3.01533397311352,0.861884930743556,2.09025761402011,0.504060259519861,1.55211357458713,1.27006134691926,0,0,1.44425809875637,1.32987716286794,1.22501613757421,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0,3.27331726736501,3.14268486780495,2.20256102594018,1.56478268869608,3.92445281484804,4.39372365468944,5.24960727500565,4.89952475688769,1.43752564364972,0.671130424230945,2.17608642603403,0.336093799142464,3.60163210450326,1.71920063963254,3.09403255366465,2.63011399117477,1.5869729378161,3.1691570175309,3.38844532069132,2.66788438833342,4.49949858640699,2.96659908770092,3.5524005747305,2.39680088414724,3.07374644257244,3.52544681848824,3.37514845829227,2.52389953621658,3.99911378165325,5.96345060569357,2.57230678351403,2.39613677545591,2.75765635983006,3.30347642998166,4.08599481872601,2.30409799884365,3.69281605644543,3.56801810049398,2.6045668527838,4.18774498502071,2.8138130501584,3.81995619442025,2.35702868378934,3.84403538157578,5.59198337475902,3.02904773332736,3.40072020480535,3.47837386442013,1.72084775396277,0.679971333707751,0.539703191637817,1.94932925234301,2.24013443548668,2.52799956237153,3.2381761289831,3.11743205523443,2.47337702157238,5.63373679106722,3.84979432242953,5.09610479413291,0,1.73192832808971,0.506719730950197,1.51657333504435,1.82694207550496,0.776813650941515,3.41416919849097,1.38788261412909,1.82679286987285,2.53677046981664,2.41156224884196,3.41007250693544,3.76999773989026,1.48316980640624,9.10975948595443,0,5.17653919831709,1.98757366614354,3.39412677194655,1.86391761218122,4.9772735491963,4.81727425670947,1.27728527604296,0.718890747035522,0,1.27070227073065,3.89455662452539,1.37250180845588,2.76439574648302,5.21472960576829,4.60287823194595,3.53239675751252,2.59586020908412,3.36069900706044,1.7416975885413,4.29628689337247,4.8401626853889,1.43132487258974,2.5289231487682,3.60124259610698,2.10986744970001,2.85753296435577,3.20284300712124,3.09215691047105,1.81092359517311,1.5089759505299,2.08016688184601,2.11141348996739,3.72632745126877,2.22437799380478,4.87553033131033,4.7329891373827,3.58261680273288,1.40442637462647,0.772043721344145,0.568326998791185,3.72826390563903,3.75241695969754,2.70093092191522,5.20838418287463,6.29645541591692,6.47921874126989,6.74348439776183,3.48755421819505,4.90414437942112,7.07607354627966,5.41752631461014,8.83650024049827,9.0643992203706,9.22110484222413,5.50246316917524,3.57492912559016,4.83651678182637,0.991256348951394,1.58670339998127,1.70630600428187,2.09013004674395,4.63922860759536,3.83198696784351,4.66993892074228,7.41879941838981,2.37264530772256,2.79988223030818,2.5133520880027,3.97912944082302,3.50935356814416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| ||
|EntrezGene=74868 | |||
|HGNC= | |||
|UniProt=Q4VAE3 | |||
|association_with_transcript=-44bp_to_NM_175212,uc007vto.1_5end | |||
|description=CAGE_peak_3_at_Tmem65_5end | |||
|id=chr15:58655026..58655037,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.31e-09!102;UBERON:0000924!3.31e-09!102;UBERON:0006601!3.31e-09!102;UBERON:0004111!7.90e-09!122;UBERON:0000073!3.10e-08!75;UBERON:0001016!3.10e-08!75;UBERON:0000025!3.63e-08!114;UBERON:0001017!4.17e-08!73;UBERON:0005743!4.17e-08!73;UBERON:0001049!1.32e-07!52;UBERON:0005068!1.32e-07!52;UBERON:0006241!1.32e-07!52;UBERON:0007135!1.32e-07!52;UBERON:0004535!3.22e-07!23;UBERON:0001009!3.22e-07!23;UBERON:0007100!4.75e-07!18;UBERON:0000948!4.75e-07!18;UBERON:0005498!4.75e-07!18;UBERON:0004140!4.75e-07!18;UBERON:0009881!4.75e-07!18;UBERON:0004141!4.75e-07!18;UBERON:0003084!4.75e-07!18;UBERON:0007005!4.75e-07!18;UBERON:0004139!4.75e-07!18;UBERON:0004291!4.75e-07!18;UBERON:0002346!5.33e-07!71;UBERON:0003075!5.33e-07!71;UBERON:0007284!5.33e-07!71;UBERON:0000033!5.80e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.39e-13,92;UBERON:0004121,1.51e-09,95;UBERON:0000924,1.51e-09,95;UBERON:0006601,1.51e-09,95;UBERON:0010371,4.91e-09,73;UBERON:0004111,8.52e-09,122;UBERON:0001016,2.93e-08,75;UBERON:0000025,3.93e-08,114;UBERON:0001017,3.95e-08,73;UBERON:0001049,1.26e-07,52;UBERON:0005068,1.26e-07,52;UBERON:0006241,1.26e-07,52;UBERON:0007135,1.26e-07,52;UBERON:0002346,1.98e-07,64;UBERON:0003075,1.98e-07,64;UBERON:0007284,1.98e-07,64;UBERON:0000073,2.26e-07,54;UBERON:0004535,3.07e-07,23;UBERON:0001009,3.07e-07,23;UBERON:0007100,4.54e-07,18;UBERON:0000948,4.54e-07,18;UBERON:0005498,4.54e-07,18;UBERON:0004140,4.54e-07,18;UBERON:0009881,4.54e-07,18;UBERON:0004141,4.54e-07,18;UBERON:0003084,4.54e-07,18;UBERON:0007005,4.54e-07,18;UBERON:0004139,4.54e-07,18;UBERON:0004291,4.54e-07,18 | |||
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| |||
|short_description=p3@Tmem65 | |||
}} |
Revision as of 10:37, 13 September 2013
Short description: | p3@Tmem65 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmem65_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_NM_175212, uc007vto.1_5end |
EntrezGene: | Tmem65 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.39e-13 | 92 |
ectoderm-derived structure | 1.51e-09 | 95 |
ectoderm | 1.51e-09 | 95 |
presumptive ectoderm | 1.51e-09 | 95 |
ecto-epithelium | 4.91e-09 | 73 |
anatomical conduit | 8.52e-09 | 122 |
nervous system | 2.93e-08 | 75 |
tube | 3.93e-08 | 114 |
central nervous system | 3.95e-08 | 73 |
neural tube | 1.26e-07 | 52 |
neural rod | 1.26e-07 | 52 |
future spinal cord | 1.26e-07 | 52 |
neural keel | 1.26e-07 | 52 |
neurectoderm | 1.98e-07 | 64 |
neural plate | 1.98e-07 | 64 |
presumptive neural plate | 1.98e-07 | 64 |
regional part of nervous system | 2.26e-07 | 54 |
cardiovascular system | 3.07e-07 | 23 |
circulatory system | 3.07e-07 | 23 |
primary circulatory organ | 4.54e-07 | 18 |
heart | 4.54e-07 | 18 |
primitive heart tube | 4.54e-07 | 18 |
primary heart field | 4.54e-07 | 18 |
anterior lateral plate mesoderm | 4.54e-07 | 18 |
heart tube | 4.54e-07 | 18 |
heart primordium | 4.54e-07 | 18 |
cardiac mesoderm | 4.54e-07 | 18 |
cardiogenic plate | 4.54e-07 | 18 |
heart rudiment | 4.54e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.