Personal tools

FFCP PHASE1:Mm9::chr4:44769425..44769473,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=319885|HGNC=|MCL_coexpression_id=726|UniProt=B1AX39|association_with_transcript=0bp_to_ENSMUST00000107824,ENSMUST00000144436,NM_138590,uc008sry.2,uc008srz.2_5end|description=CAGE_peak_2_at_Zcchc7_5end|id=chr4:44769425..44769473,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.05e-15!94;UBERON:0007811!8.83e-13!86;UBERON:0000033!1.16e-09!63;UBERON:0003056!6.69e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.68e-08,43;UBERON:0002346,3.17e-08,64;UBERON:0003075,3.17e-08,64;UBERON:0007284,3.17e-08,64;UBERON:0003056,6.36e-08,49;UBERON:0010371,6.60e-08,73;UBERON:0007811,6.18e-07,36|phase1_expression=8.16759120234449,1.74487703819681,1.36499771816861,3.0246421130683,1.50268718983904,1.84667199103079,0.700837921786577,15.4947988129892,4.22366166455,5.61754863172784,12.3276937122364,10.6096971463797,11.9840510951844,9.35398305883272,6.32908547449759,9.51633756732182,10.4934281719222,21.4514272443602,25.6403990842732,14.429248161133,13.1817099734158,4.0709289992363,2.35079810225042,1.43993180514066,2.06468352960453,0.57423196411502,1.7230479846363,1.939241094173,0.950117097281869,2.01624103807945,2.43903561720835,3.17515336729816,4.30545351309199,15.8481681015439,5.19932915552294,3.65716219788683,4.28755648150975,3.76678467663217,0.7813353445238,3.14114246384279,2.94115744015507,1.36609096991689,1.45653105909346,6.29484089877886,4.46058497365864,3.12029478674859,0,0,0,2.3331587888914,0.279972843250725,0,13.7581736967344,5.80289713609076,7.05796978199174,1.02903774414379,2.86533439938757,2.06268836910977,7.89034197352431,6.87688273053643,3.80298842103708,1.35537812827653,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.768436610643109,6.53244557543409,2.97013064329719,5.67877395648731,3.99911378165325,4.19650227808066,8.32937434661688,8.05101956553185,7.35375029288017,7.70811166995721,7.15049093277051,15.0534402591119,4.87979264601717,5.30628332893976,5.2091337055676,11.1673199600552,12.380777420697,11.7654650788144,11.1958862479994,17.5117167382897,5.77838282058432,3.3319525066601,3.24957708459178,11.8844440367688,4.30211938490693,3.39985666853875,5.39703191637817,3.24888208723835,4.48026887097336,6.03911006566533,1.36344258062446,2.59786004602869,2.82671659608272,10.563256483251,5.13305909657271,7.64415719119937,7.11066703153331,2.38140145112336,3.04031838570118,2.02209778005913,3.31133251185274,30.2957323867191,7.86743337043571,2.94925055502431,3.34912026143355,2.30615497256059,5.57673770044703,7.64326596382081,2.89033160058254,3.46072954828123,8.96516012903452,6.19227386364912,7.76480879747564,6.18356251689102,7.27312879702833,1.86391761218122,20.4946557908083,17.5935233723302,1.02182822083437,2.39630249011841,2.39961092397363,0.889491589511453,19.3229924832221,15.5550204958333,13.4450156760765,14.9488915365358,12.5300574091862,13.2984348518118,14.2772311499627,7.84163101647435,7.58882520721567,12.8888606801174,13.4682787767343,7.93734702072493,8.27647575960503,10.4436035287103,15.0704817835715,15.0360663124435,16.7828973573153,15.6481880014747,27.6812606690747,4.74249584452253,11.9136830505726,11.7887253189846,8.32943783224784,13.0682207136031,12.1888258282758,12.3469281844766,6.96619933864726,0,0.257347907114715,0.852490498186778,5.38527008592305,5.62862543954631,7.02242039697958,7.10234206755631,6.68998387941173,7.86762275725629,9.30135779001631,6.43856163359086,10.1585847859437,8.55711219550098,9.52171291658752,12.0792526223325,6.87139940899062,8.34290438105992,7.38135303182045,12.8276868624118,8.12946437796347,3.30418782983798,2.90895623329899,5.54549451391608,6.96710015581316,5.15469845288373,5.64713868945359,4.66993892074228,2.85338439168839,1.89811624617805,3.29397909448022,3.51869292320377,6.96347652144028,2.9244613067868,3.59527763461689,4.32276099749388,3.38540164532424,1.70701110857774,6.96915926919346,10.1436962105772,9.36796108088446,6.40043207653165,8.41629838683823,9.42224403151434,6.34723636312289,6.43694784149637,3.45512058981041,2.96452627087149,4.67166296005063,4.12773889737726,2.9232074610031,5.07150303471257,5.30589751455317,4.58326533206556,2.5892652370573,4.21551589615092,4.11842119782122,5.75072826109418,2.23284568601102,4.05648975048929,7.07220858251913,4.30553792452589,1.92977408545347,9.60716588866344,3.41084541186873,5.86673915191293,5.60158783058121,8.44884893838608,7.70528784232352,6.18913466303636,6.04914308359176,6.62067605246002,7.9727288273559,11.0023790373666,9.83179888294428,7.25276923836761,6.219909519005,1.50791283939272,0.54390568381871,2.95058563811422,2.75936746304733,14.2890025089135,16.0580010631318,3.27869890753351,6.5642441073137,5.04813151066011,6.24701990874622,5.38558494331997,1.67278158566786,4.90157082981267,3.39691836946599,1.61924280669958,4.09158201075837,5.13874111330481,24.4204200480573,10.0777460497871,4.45164009168138,8.30723492703238,11.71287873105,3.98235415019888,5.82673526771955,5.13950046840077,5.46954731292105,2.36241514304618,7.37844355065426,4.65170927702798,8.72480950746013,9.26893183800275,10.1131762539461,5.27093042874994,6.18813259489121,15.6602218646742,6.84232157318979,2.06973894052407,5.35842587578981,9.22169214939823,9.27517851530767,9.87294123612726,4.56697423671899,3.75474732901937,3.38931313382112,4.85162475720916,5.93590510589328,8.55761461488299,8.26287071515735,6.56547892017251,8.53532678674319,4.08073171281791,14.8340241608408,7.00570611271196,3.714963623338,5.18544676635193,7.72310673719233,9.70529016819279,9.83746144788047,6.79913719975421,4.3384950220334,5.66619892598138,4.77335309007557,3.47969592939249,6.91286188231286,7.34436317588249,6.89991376847747,3.9305261474312,4.45052343069908,6.61227645802687,3.14107130380836,3.11075935900303,6.83473244395618,6.20062232552609,7.32631075615496,4.63283773279873,7.00024278038572,5.68303223302017,13.1785777882807,12.9092962510329,11.9788034056434,16.1483390415595,12.0792060413003,15.5536203379247,10.4283669807299,3.85177909051312,5.13554785824136,5.3267537420896,6.26593434836185,9.33802367471945,9.2550496130376,10.6336459565696,13.7314371929481,14.707913684415,16.1321896218945,12.6695244961678,12.4113275716025,14.375858968333,6.57518112484113,1.99787358036658,4.66512054369274,3.8613461763738,5.60249822693352,4.31669693537719,10.2564909589668,7.5028932677673,4.01257683228291,13.5540442228096,13.8097570952153,10.8850147553485,14.0919609521824,10.2762377965596,9.06472676867641,4.72515750162264,13.0593148935024,15.406841905463,10.3552062350364,4.25528125095124,11.1726964552289,10.4147499510022,5.34834777550247,3.98265008993166,4.59608771125035,11.1123363900808,6.18105171716683,9.62757628775446,6.82282471762253,6.59046179714623,11.3175804831646,11.2369808963859,9.73182316554013,10.6829972257441,8.09699275181225,8.57544011991931,10.0312794641127,6.1812885120496,10.1567254892734,6.85738504770831,9.05126611412621,7.39152188836695,9.30217066446903,11.2931256498397,9.64606529965112,7.68297486065645,9.47050961176234,9.37048385536446,11.2228454331548,10.5585166130515,9.85044823755635,5.72923460437565,12.3949472948773,10.9956768259251,6.49507502638659,8.88940112092552,6.01638951335235,7.46024495068489,5.7353768971074,6.4922993973718|short_description=p2@Zcchc7}}
|EntrezGene=319885
|HGNC=
|MCL_coexpression_id=726
|UniProt=B1AX39
|association_with_transcript=0bp_to_ENSMUST00000107824,ENSMUST00000144436,NM_138590,uc008sry.2,uc008srz.2_5end
|description=CAGE_peak_2_at_Zcchc7_5end
|id=chr4:44769425..44769473,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.05e-15!94;UBERON:0007811!8.83e-13!86;UBERON:0000033!1.16e-09!63;UBERON:0003056!6.69e-08!49
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.68e-08,43;UBERON:0002346,3.17e-08,64;UBERON:0003075,3.17e-08,64;UBERON:0007284,3.17e-08,64;UBERON:0003056,6.36e-08,49;UBERON:0010371,6.60e-08,73;UBERON:0007811,6.18e-07,36
|phase1_expression=8.16759120234449,1.74487703819681,1.36499771816861,3.0246421130683,1.50268718983904,1.84667199103079,0.700837921786577,15.4947988129892,4.22366166455,5.61754863172784,12.3276937122364,10.6096971463797,11.9840510951844,9.35398305883272,6.32908547449759,9.51633756732182,10.4934281719222,21.4514272443602,25.6403990842732,14.429248161133,13.1817099734158,4.0709289992363,2.35079810225042,1.43993180514066,2.06468352960453,0.57423196411502,1.7230479846363,1.939241094173,0.950117097281869,2.01624103807945,2.43903561720835,3.17515336729816,4.30545351309199,15.8481681015439,5.19932915552294,3.65716219788683,4.28755648150975,3.76678467663217,0.7813353445238,3.14114246384279,2.94115744015507,1.36609096991689,1.45653105909346,6.29484089877886,4.46058497365864,3.12029478674859,0,0,0,2.3331587888914,0.279972843250725,0,13.7581736967344,5.80289713609076,7.05796978199174,1.02903774414379,2.86533439938757,2.06268836910977,7.89034197352431,6.87688273053643,3.80298842103708,1.35537812827653,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.768436610643109,6.53244557543409,2.97013064329719,5.67877395648731,3.99911378165325,4.19650227808066,8.32937434661688,8.05101956553185,7.35375029288017,7.70811166995721,7.15049093277051,15.0534402591119,4.87979264601717,5.30628332893976,5.2091337055676,11.1673199600552,12.380777420697,11.7654650788144,11.1958862479994,17.5117167382897,5.77838282058432,3.3319525066601,3.24957708459178,11.8844440367688,4.30211938490693,3.39985666853875,5.39703191637817,3.24888208723835,4.48026887097336,6.03911006566533,1.36344258062446,2.59786004602869,2.82671659608272,10.563256483251,5.13305909657271,7.64415719119937,7.11066703153331,2.38140145112336,3.04031838570118,2.02209778005913,3.31133251185274,30.2957323867191,7.86743337043571,2.94925055502431,3.34912026143355,2.30615497256059,5.57673770044703,7.64326596382081,2.89033160058254,3.46072954828123,8.96516012903452,6.19227386364912,7.76480879747564,6.18356251689102,7.27312879702833,1.86391761218122,20.4946557908083,17.5935233723302,1.02182822083437,2.39630249011841,2.39961092397363,0.889491589511453,19.3229924832221,15.5550204958333,13.4450156760765,14.9488915365358,12.5300574091862,13.2984348518118,14.2772311499627,7.84163101647435,7.58882520721567,12.8888606801174,13.4682787767343,7.93734702072493,8.27647575960503,10.4436035287103,15.0704817835715,15.0360663124435,16.7828973573153,15.6481880014747,27.6812606690747,4.74249584452253,11.9136830505726,11.7887253189846,8.32943783224784,13.0682207136031,12.1888258282758,12.3469281844766,6.96619933864726,0,0.257347907114715,0.852490498186778,5.38527008592305,5.62862543954631,7.02242039697958,7.10234206755631,6.68998387941173,7.86762275725629,9.30135779001631,6.43856163359086,10.1585847859437,8.55711219550098,9.52171291658752,12.0792526223325,6.87139940899062,8.34290438105992,7.38135303182045,12.8276868624118,8.12946437796347,3.30418782983798,2.90895623329899,5.54549451391608,6.96710015581316,5.15469845288373,5.64713868945359,4.66993892074228,2.85338439168839,1.89811624617805,3.29397909448022,3.51869292320377,6.96347652144028,2.9244613067868,3.59527763461689,4.32276099749388,3.38540164532424,1.70701110857774,6.96915926919346,10.1436962105772,9.36796108088446,6.40043207653165,8.41629838683823,9.42224403151434,6.34723636312289,6.43694784149637,3.45512058981041,2.96452627087149,4.67166296005063,4.12773889737726,2.9232074610031,5.07150303471257,5.30589751455317,4.58326533206556,2.5892652370573,4.21551589615092,4.11842119782122,5.75072826109418,2.23284568601102,4.05648975048929,7.07220858251913,4.30553792452589,1.92977408545347,9.60716588866344,3.41084541186873,5.86673915191293,5.60158783058121,8.44884893838608,7.70528784232352,6.18913466303636,6.04914308359176,6.62067605246002,7.9727288273559,11.0023790373666,9.83179888294428,7.25276923836761,6.219909519005,1.50791283939272,0.54390568381871,2.95058563811422,2.75936746304733,14.2890025089135,16.0580010631318,3.27869890753351,6.5642441073137,5.04813151066011,6.24701990874622,5.38558494331997,1.67278158566786,4.90157082981267,3.39691836946599,1.61924280669958,4.09158201075837,5.13874111330481,24.4204200480573,10.0777460497871,4.45164009168138,8.30723492703238,11.71287873105,3.98235415019888,5.82673526771955,5.13950046840077,5.46954731292105,2.36241514304618,7.37844355065426,4.65170927702798,8.72480950746013,9.26893183800275,10.1131762539461,5.27093042874994,6.18813259489121,15.6602218646742,6.84232157318979,2.06973894052407,5.35842587578981,9.22169214939823,9.27517851530767,9.87294123612726,4.56697423671899,3.75474732901937,3.38931313382112,4.85162475720916,5.93590510589328,8.55761461488299,8.26287071515735,6.56547892017251,8.53532678674319,4.08073171281791,14.8340241608408,7.00570611271196,3.714963623338,5.18544676635193,7.72310673719233,9.70529016819279,9.83746144788047,6.79913719975421,4.3384950220334,5.66619892598138,4.77335309007557,3.47969592939249,6.91286188231286,7.34436317588249,6.89991376847747,3.9305261474312,4.45052343069908,6.61227645802687,3.14107130380836,3.11075935900303,6.83473244395618,6.20062232552609,7.32631075615496,4.63283773279873,7.00024278038572,5.68303223302017,13.1785777882807,12.9092962510329,11.9788034056434,16.1483390415595,12.0792060413003,15.5536203379247,10.4283669807299,3.85177909051312,5.13554785824136,5.3267537420896,6.26593434836185,9.33802367471945,9.2550496130376,10.6336459565696,13.7314371929481,14.707913684415,16.1321896218945,12.6695244961678,12.4113275716025,14.375858968333,6.57518112484113,1.99787358036658,4.66512054369274,3.8613461763738,5.60249822693352,4.31669693537719,10.2564909589668,7.5028932677673,4.01257683228291,13.5540442228096,13.8097570952153,10.8850147553485,14.0919609521824,10.2762377965596,9.06472676867641,4.72515750162264,13.0593148935024,15.406841905463,10.3552062350364,4.25528125095124,11.1726964552289,10.4147499510022,5.34834777550247,3.98265008993166,4.59608771125035,11.1123363900808,6.18105171716683,9.62757628775446,6.82282471762253,6.59046179714623,11.3175804831646,11.2369808963859,9.73182316554013,10.6829972257441,8.09699275181225,8.57544011991931,10.0312794641127,6.1812885120496,10.1567254892734,6.85738504770831,9.05126611412621,7.39152188836695,9.30217066446903,11.2931256498397,9.64606529965112,7.68297486065645,9.47050961176234,9.37048385536446,11.2228454331548,10.5585166130515,9.85044823755635,5.72923460437565,12.3949472948773,10.9956768259251,6.49507502638659,8.88940112092552,6.01638951335235,7.46024495068489,5.7353768971074,6.4922993973718
|short_description=p2@Zcchc7
}}

Revision as of 05:04, 14 September 2013

Short description:p2@Zcchc7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Zcchc7_5end
Coexpression cluster:MCL_coexpression_mm9:726
Association with transcript: 0bp_to_ENSMUST00000107824, ENSMUST00000144436, NM_138590, uc008sry.2, uc008srz.2_5end
EntrezGene:Zcchc7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Zcchc7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.98
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F93.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.88
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H930.30
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F55.58
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H18.97
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F57.76
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B220.49
cerebellum, neonate N30.CNhs11135.1395-42I217.59
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A419.32
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F113.45
cortex, adult.CNhs10473.12-14D514.95
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B214.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B212.89
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C67.94
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C910.44
eyeball, embryo E17.CNhs11023.1261-18D415.07
eyeball, neonate N00.CNhs11207.633-15C615.04
eyeball, neonate N01.CNhs11140.1532-43E716.78
eyeball, neonate N02.CNhs11205.1551-44G815.65
eyeball, neonate N16.CNhs11188.777-19A227.68
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H211.91
forelimb, embryo E13.CNhs10589.384-1E211.79
forelimb, embryo E14.CNhs10577.413-26A88.33
forelimb, embryo E15.CNhs11007.437-20E713.07
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B512.35
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C67.87
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E310.16
heart, neonate N03.CNhs11221.1349-25I28.56
heart, neonate N10.CNhs11118.749-24G19.52
heart, neonate N16.CNhs11209.782-15G112.08
heart, neonate N20.CNhs11127.821-26I66.87
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D27.38
hippocampus, adult.CNhs10478.13-16E812.83
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F86.97
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G78.42
kidney, neonate N10.CNhs11206.758-6D59.42
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F36.44
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A34.58
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B19.61
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B68.45
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A37.97
lung, neonate N10.CNhs11219.750-23E611.00
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H26.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C214.29
medulla oblongata, neonate N30.CNhs11200.1396-42A316.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I924.42
ovary, adult.CNhs10507.91-2I710.08
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G611.71
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F69.28
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G48.56
skin, neonate N03.CNhs11215.662-22H38.26
skin, neonate N06.CNhs11097.693-20I56.57
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C914.83
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H19.71
spleen, neonate N25.CNhs11099.1354-25G39.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.67
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D47.34
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I55.68
testis, embryo E18.CNhs11027.503-18G513.18
testis, neonate N00.CNhs11189.1300-22B712.91
testis, neonate N07.CNhs11222.726-26I411.98
testis, neonate N10.CNhs11204.763-44D916.15
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E215.55
thymus, adult.CNhs10471.38-12B510.43
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G49.34
thymus, neonate N02.CNhs11181.1541-43F89.26
thymus, neonate N03.CNhs11137.2104-43C710.63
thymus, neonate N06.CNhs11197.681-26C413.73
thymus, neonate N07.CNhs11211.713-19D314.71
thymus, neonate N10.CNhs11194.748-24E416.13
thymus, neonate N20.CNhs11186.820-7A212.67
thymus, neonate N25.CNhs11125.1362-25G712.41
thymus, neonate N30.CNhs11132.1393-42G214.38
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E510.26
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I84.26
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H210.41
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.03
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.39
whole body, embryo E17.5.CNhs10513.490-9F911.00
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anterior region of body1.68e-0843
neurectoderm3.17e-0864
neural plate3.17e-0864
presumptive neural plate3.17e-0864
pre-chordal neural plate6.36e-0849
ecto-epithelium6.60e-0873
craniocervical region6.18e-0736







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:44769425..44769473,%2B&oldid=3011274"