FFCP PHASE1:Mm9::chr12:119539732..119539762,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20688|HGNC=|UniProt=Q62445,Q6DFV2|association_with_transcript=150bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end|description=CAGE_peak_3_at_Sp4_5end|id=chr12:119539732..119539762,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!9.31e-09!122;UBERON:0000477!2.00e-08!154;UBERON:0000025!2.45e-08!114;UBERON:0000468!5.00e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.73e-08,122;UBERON:0000025,2.06e-07,114;UBERON:0011216,4.88e-07,194|phase1_expression=1.44133962394315,1.04692622291808,0.454999239389536,1.20985684522732,2.50447864973174,0.503637815735669,0.700837921786577,1.42035655785734,1.54867594366833,2.34064526321993,0,0.239316476986009,2.22560948910567,0.699363219351979,4.33042690360362,3.44207954562704,2.79824751251259,1.41957974411207,1.23402990245165,1.27316895539409,1.36069264241712,0.695036658406197,0.522399578277871,0.47997726838022,0.68822784320151,0,0.430761996159075,0.861884930743556,1.33016393619462,0,0,0.635030673459631,0,0,0.577703239502549,0.664938581433969,0.612508068787107,1.67412652294763,0,3.66466620781659,0.588231488031014,0,0.485510353031154,0.377690453926732,0.506884656097573,0.734187008646726,0,0.218025156380447,0.659058548203415,0.388859798148567,0,0,0.503347818173209,0,2.68875039313971,0.514518872071894,1.14613375975503,0.515672092277442,1.82084814773638,3.70293685490423,1.90149421051854,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,1.76272340924412,0.540023753326763,1.26194976810829,0.571301968807607,2.42955395046775,2.20483438586917,1.82106394934649,0.919218786610021,2.20231761998777,1.27687338085188,0.921639199537461,3.29715719325485,4.48289453651807,3.64639359389732,0.837548997004143,1.12552522006336,1.37518422999129,1.76777151284201,1.99320353118744,2.23679334990361,0.37863096666592,1.13357340160178,1.44932244350839,0,0.679971333707751,1.61910957491345,0.649776417447669,2.24013443548668,1.12355536105401,0.852151612890289,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,1.1418387971906,6.21450920753212,0.593768556259299,0.693941307064543,0,0.691846491768175,0.753613202763113,0.705532242814229,0.251333182659351,1.48316980640624,1.73519228303894,0.884610551949874,1.61766849947409,2.20841518460394,2.90925151881133,11.1835056730873,10.5401086924157,8.79676168616511,2.04365644166873,0.239630249011841,0.599902730993408,0.254140454146129,1.79748767285787,2.74500361691176,1.7591609295801,2.25971616249959,3.58001640262463,2.49345653471472,2.10913641988085,0.916554274652847,1.61729061793121,1.0108910337347,2.31486041475121,1.43132487258974,1.14951052216736,1.44049703844279,0.90422890701429,1.7009124787832,3.07472928683639,1.96773621575431,5.95017752699736,1.29340795759705,0.756424320671277,1.75951124163949,1.09597866213787,1.11218899690239,0.348252166522167,0.411564272815887,0.796137067273973,0,0.51469581422943,0,0.621377317606506,1.64168241986767,0.720248245844059,1.65721314909647,1.57411385397923,1.69693824176116,0.697601834251224,0.804820204198858,1.98501082024188,0.493679549740441,1.14917224855367,1.94565142910054,0.877199924551994,1.97595103761946,2.28150911892632,2.94405927989778,3.2929475961371,1.98251269790279,2.11560453330835,1.06644125267617,0.464473343720877,1.41754207454303,0.605050573870028,1.11189021922435,1.14135375667535,0.474529061544512,0.988193728344065,0.754005626400808,1.1937388322469,1.16978452271472,3.59527763461689,1.51296634912286,2.19055400579804,0.569003702859245,1.48523066392647,0,1.01825663922657,0.775809948670503,0.98190147846446,0.442655759869801,1.62371162777562,1.09899109488962,1.72756029490521,0.592905254174298,3.83743743147016,2.55526693647164,3.14806957338795,4.05720242777006,4.10001171579109,3.8193877767213,2.30156909960649,3.24270453550071,2.47105271869273,5.75072826109418,4.09355042435354,2.18426371180192,2.02063102357689,2.69096120282868,2.41221760681684,3.14080423283228,0.568474235311454,0.814824882210129,0.848725428875941,1.17345124144251,1.50755631697634,3.33261097240419,1.36593553500459,2.99506773801763,3.10050565508285,1.91345722388985,3.93271955317771,3.10832967358612,2.74833211304872,1.50791283939272,0,0,0.827810238914197,2.0871576698413,1.75817529888305,0.491804836130026,1.51482556322624,0.315508219416257,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,4.17717711348349,2.55492153374884,0.890328018336276,0.977321756121456,0.989820737835213,0,1.21390318077491,1.209294227859,0.943025398779491,0.885905678642318,1.84461088766356,1.55056975900933,0.363533729477506,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,1.70219802876894,2.34079422240703,0.517434735131018,1.07168517515796,1.41872186913819,0.891844088010353,1.64549020602121,0.608929898229199,0,0.42366414172764,1.7642271844397,2.4732937941222,0.968786560175433,1.5078231232039,1.1937234400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| ||
|EntrezGene=20688 | |||
|HGNC= | |||
|UniProt=Q62445,Q6DFV2 | |||
|association_with_transcript=150bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end | |||
|description=CAGE_peak_3_at_Sp4_5end | |||
|id=chr12:119539732..119539762,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!9.31e-09!122;UBERON:0000477!2.00e-08!154;UBERON:0000025!2.45e-08!114;UBERON:0000468!5.00e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.73e-08,122;UBERON:0000025,2.06e-07,114;UBERON:0011216,4.88e-07,194 | |||
|phase1_expression=1.44133962394315,1.04692622291808,0.454999239389536,1.20985684522732,2.50447864973174,0.503637815735669,0.700837921786577,1.42035655785734,1.54867594366833,2.34064526321993,0,0.239316476986009,2.22560948910567,0.699363219351979,4.33042690360362,3.44207954562704,2.79824751251259,1.41957974411207,1.23402990245165,1.27316895539409,1.36069264241712,0.695036658406197,0.522399578277871,0.47997726838022,0.68822784320151,0,0.430761996159075,0.861884930743556,1.33016393619462,0,0,0.635030673459631,0,0,0.577703239502549,0.664938581433969,0.612508068787107,1.67412652294763,0,3.66466620781659,0.588231488031014,0,0.485510353031154,0.377690453926732,0.506884656097573,0.734187008646726,0,0.218025156380447,0.659058548203415,0.388859798148567,0,0,0.503347818173209,0,2.68875039313971,0.514518872071894,1.14613375975503,0.515672092277442,1.82084814773638,3.70293685490423,1.90149421051854,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,1.76272340924412,0.540023753326763,1.26194976810829,0.571301968807607,2.42955395046775,2.20483438586917,1.82106394934649,0.919218786610021,2.20231761998777,1.27687338085188,0.921639199537461,3.29715719325485,4.48289453651807,3.64639359389732,0.837548997004143,1.12552522006336,1.37518422999129,1.76777151284201,1.99320353118744,2.23679334990361,0.37863096666592,1.13357340160178,1.44932244350839,0,0.679971333707751,1.61910957491345,0.649776417447669,2.24013443548668,1.12355536105401,0.852151612890289,0.259786004602869,0,1.69012103732017,0,0,0,0,0,0,1.1418387971906,6.21450920753212,0.593768556259299,0.693941307064543,0,0.691846491768175,0.753613202763113,0.705532242814229,0.251333182659351,1.48316980640624,1.73519228303894,0.884610551949874,1.61766849947409,2.20841518460394,2.90925151881133,11.1835056730873,10.5401086924157,8.79676168616511,2.04365644166873,0.239630249011841,0.599902730993408,0.254140454146129,1.79748767285787,2.74500361691176,1.7591609295801,2.25971616249959,3.58001640262463,2.49345653471472,2.10913641988085,0.916554274652847,1.61729061793121,1.0108910337347,2.31486041475121,1.43132487258974,1.14951052216736,1.44049703844279,0.90422890701429,1.7009124787832,3.07472928683639,1.96773621575431,5.95017752699736,1.29340795759705,0.756424320671277,1.75951124163949,1.09597866213787,1.11218899690239,0.348252166522167,0.411564272815887,0.796137067273973,0,0.51469581422943,0,0.621377317606506,1.64168241986767,0.720248245844059,1.65721314909647,1.57411385397923,1.69693824176116,0.697601834251224,0.804820204198858,1.98501082024188,0.493679549740441,1.14917224855367,1.94565142910054,0.877199924551994,1.97595103761946,2.28150911892632,2.94405927989778,3.2929475961371,1.98251269790279,2.11560453330835,1.06644125267617,0.464473343720877,1.41754207454303,0.605050573870028,1.11189021922435,1.14135375667535,0.474529061544512,0.988193728344065,0.754005626400808,1.1937388322469,1.16978452271472,3.59527763461689,1.51296634912286,2.19055400579804,0.569003702859245,1.48523066392647,0,1.01825663922657,0.775809948670503,0.98190147846446,0.442655759869801,1.62371162777562,1.09899109488962,1.72756029490521,0.592905254174298,3.83743743147016,2.55526693647164,3.14806957338795,4.05720242777006,4.10001171579109,3.8193877767213,2.30156909960649,3.24270453550071,2.47105271869273,5.75072826109418,4.09355042435354,2.18426371180192,2.02063102357689,2.69096120282868,2.41221760681684,3.14080423283228,0.568474235311454,0.814824882210129,0.848725428875941,1.17345124144251,1.50755631697634,3.33261097240419,1.36593553500459,2.99506773801763,3.10050565508285,1.91345722388985,3.93271955317771,3.10832967358612,2.74833211304872,1.50791283939272,0,0,0.827810238914197,2.0871576698413,1.75817529888305,0.491804836130026,1.51482556322624,0.315508219416257,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,4.17717711348349,2.55492153374884,0.890328018336276,0.977321756121456,0.989820737835213,0,1.21390318077491,1.209294227859,0.943025398779491,0.885905678642318,1.84461088766356,1.55056975900933,0.363533729477506,0.712994756769443,1.26414703174326,1.05418608574999,1.03135543248187,1.70219802876894,2.34079422240703,0.517434735131018,1.07168517515796,1.41872186913819,0.891844088010353,1.64549020602121,0.608929898229199,0,0.42366414172764,1.7642271844397,2.4732937941222,0.968786560175433,1.5078231232039,1.19372344003136,1.80554989719567,1.7488850197791,2.41052892613663,4.78438466233988,0.206386867963223,2.77791791054568,3.57900068308913,8.61173634642459,5.94823250336959,1.18984900995699,0.979660166265606,0.690999869022119,1.90934123603023,1.58167996790568,2.43983360552218,1.29606408986162,1.67270636811575,1.09181281873089,0.944050424693745,1.48776220305605,1.30877970992015,5.18459893167171,0.621339313086926,0,0.598066184175915,0.66183396182839,1.16670713006429,0.516639293910924,0.844780627453891,0.938857909166032,0.5208175393758,1.67774951081137,0.241584120826006,0.288030006257865,3.16011120628178,1.01362607645082,0.6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| |||
|short_description=p3@Sp4 | |||
}} | |||
Revision as of 22:31, 12 September 2013
| Short description: | p3@Sp4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Sp4_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 150bp_to_ENSMUST00000026367, NM_001166385, NM_009239, uc007pif.2, uc011yvt.1_5end |
| EntrezGene: | Sp4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 5.73e-08 | 122 |
| tube | 2.06e-07 | 114 |
| organ system subdivision | 4.88e-07 | 194 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
