FFCP PHASE1:Mm9::chr2:132088872..132089004,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110911|HGNC=|MCL_coexpression_id=1|UniProt=Q99L43,Q6PBC0,A2AMQ4|association_with_transcript=0bp_to_ENSMUST00000103181,ENSMUST00000110158,ENSMUST00000147456,NM_138651,uc008mmn.1,uc008mmo.1_5end|description=CAGE_peak_1_at_Cds2_5end|id=chr2:132088872..132089004,+|ontology_enrichment_celltype=CL:0000117!1.38e-10!23;CL:0000337!1.38e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-10,23;CL:0000337,1.38e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.44e-21!52;UBERON:0005068!1.44e-21!52;UBERON:0006241!1.44e-21!52;UBERON:0007135!1.44e-21!52;UBERON:0000955!6.68e-21!50;UBERON:0006238!6.68e-21!50;UBERON:0000073!1.53e-20!75;UBERON:0001016!1.53e-20!75;UBERON:0002616!3.05e-20!49;UBERON:0001017!3.14e-20!73;UBERON:0005743!3.14e-20!73;UBERON:0000033!7.34e-20!63;UBERON:0002346!3.35e-19!71;UBERON:0003075!3.35e-19!71;UBERON:0007284!3.35e-19!71;UBERON:0007811!6.26e-18!86;UBERON:0003080!2.61e-17!40;UBERON:0003056!8.02e-17!49;UBERON:0002780!1.27e-16!39;UBERON:0001890!1.27e-16!39;UBERON:0006240!1.27e-16!39;UBERON:0002020!8.38e-16!34;UBERON:0004121!3.27e-15!102;UBERON:0000924!3.27e-15!102;UBERON:0006601!3.27e-15!102;UBERON:0004111!2.93e-14!122;UBERON:0000153!3.73e-14!94;UBERON:0000025!1.53e-13!114;UBERON:0002791!3.07e-13!29;UBERON:0003528!3.07e-13!29;UBERON:0001893!3.07e-13!29;UBERON:0000477!4.73e-12!154;UBERON:0000483!1.92e-11!181;UBERON:0000119!2.54e-11!183;UBERON:0000956!5.33e-09!21;UBERON:0001869!5.33e-09!21;UBERON:0000203!5.33e-09!21;UBERON:0002619!4.45e-08!17;UBERON:0000475!3.27e-07!200;UBERON:0002021!8.53e-07!10;UBERON:0000411!8.53e-07!10;UBERON:0001950!8.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.06e-23,54;UBERON:0001049,1.44e-21,52;UBERON:0005068,1.44e-21,52;UBERON:0006241,1.44e-21,52;UBERON:0007135,1.44e-21,52;UBERON:0001016,1.53e-20,75;UBERON:0001017,3.14e-20,73;UBERON:0002346,3.84e-20,64;UBERON:0003075,3.84e-20,64;UBERON:0007284,3.84e-20,64;UBERON:0000955,8.02e-19,47;UBERON:0006238,8.02e-19,47;UBERON:0002616,3.52e-18,46;UBERON:0010314,1.29e-17,92;UBERON:0003080,2.61e-17,40;UBERON:0003056,8.02e-17,49;UBERON:0002780,1.27e-16,39;UBERON:0001890,1.27e-16,39;UBERON:0006240,1.27e-16,39;UBERON:0002020,8.38e-16,34;UBERON:0004121,1.87e-15,95;UBERON:0000924,1.87e-15,95;UBERON:0006601,1.87e-15,95;UBERON:0004111,2.93e-14,122;UBERON:0010371,3.79e-14,73;UBERON:0000025,1.53e-13,114;UBERON:0003528,3.07e-13,29;UBERON:0002791,3.07e-13,29;UBERON:0001893,3.07e-13,29;UBERON:0000483,3.26e-11,174;UBERON:0000119,4.37e-11,176;UBERON:0000956,5.33e-09,21;UBERON:0001869,5.33e-09,21;UBERON:0000203,5.33e-09,21;UBERON:0002619,4.45e-08,17;UBERON:0002021,8.53e-07,10;UBERON:0000411,8.53e-07,10;UBERON:0001950,8.53e-07,10|phase1_expression=21.2997966649376,12.2141392673776,17.2899710968024,28.1291716515352,29.0519523368881,11.2479112180966,11.6806320297763,32.6682008307188,12.248618827195,11.2350972634557,8.90333434772626,10.2108363514031,26.5361131393369,25.6141779087662,8.99396356902289,10.5287139042709,6.99561878128147,25.5524353940173,29.2053743580224,23.7658205006897,37.9293074073771,7.04965753526286,4.70159620450084,9.91953021319121,15.8292403936347,17.8011908875656,14.2151458732495,12.9282739611533,17.1021077510736,13.1055667475164,12.4169085966971,14.6057054895715,19.0670084151217,15.8481681015439,12.7094712690561,12.1351291111699,12.4543307320045,66.5465292871683,39.06676722619,40.3113282859825,72.3524730278148,71.0367304356784,61.6598148349565,13.2191658874356,14.9024088892686,18.1711284640065,10.9534788208725,13.2995345392072,23.9457939180574,28.7756250629939,13.0187372111587,15.8127820801469,27.6841299995265,35.5427449585559,36.2981303073861,13.6347501099052,14.6132054368766,16.5015069528782,44.3073049282519,43.3772603003067,55.7771635085438,15.9256930072492,14.2287167377782,14.3983954765024,18.7884608887725,17.7620028736525,17.9760066311043,18.4424786554346,22.5006458709397,21.0609263797437,26.5009451302741,73.1266520073737,65.8188252035808,20.3334726696824,27.0284228271427,21.1420320920305,101.306610519438,136.242389736895,130.872766334319,44.7094515405357,50.4096916249277,34.9011958273029,128.982545538638,157.010768198839,147.297510856845,63.0505172913649,57.0910440004403,51.2598476019577,19.0072745266292,26.3744744772681,38.5519769973231,36.9982267101996,14.9593693415705,12.4131734076698,35.0879265421741,30.9138552097162,19.9431076587088,13.6344258062446,10.3914401841148,16.606960001986,17.8871143116384,20.5322363862909,22.9324715735981,78.2173373468664,17.3192832808971,20.2687892380079,16.6823066854878,21.5807532669023,17.3488382043605,30.7275227864187,14.5727674483554,9.74289530598852,13.8369298353635,22.6083960828934,21.9890882343768,20.4836543867371,41.0343646439061,17.7857209011491,24.7690954545965,11.1619126463712,11.2629174414801,9.21262980956922,20.5030937339934,88.1270199004757,103.466673165847,11.240110429178,7.42853771936706,7.7987355029143,5.84523044536098,125.524555821241,109.342644073652,37.8219599859722,115.41934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| ||
|EntrezGene=110911 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q99L43,Q6PBC0,A2AMQ4 | |||
|association_with_transcript=0bp_to_ENSMUST00000103181,ENSMUST00000110158,ENSMUST00000147456,NM_138651,uc008mmn.1,uc008mmo.1_5end | |||
|description=CAGE_peak_1_at_Cds2_5end | |||
|id=chr2:132088872..132089004,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.38e-10!23;CL:0000337!1.38e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.38e-10,23;CL:0000337,1.38e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.44e-21!52;UBERON:0005068!1.44e-21!52;UBERON:0006241!1.44e-21!52;UBERON:0007135!1.44e-21!52;UBERON:0000955!6.68e-21!50;UBERON:0006238!6.68e-21!50;UBERON:0000073!1.53e-20!75;UBERON:0001016!1.53e-20!75;UBERON:0002616!3.05e-20!49;UBERON:0001017!3.14e-20!73;UBERON:0005743!3.14e-20!73;UBERON:0000033!7.34e-20!63;UBERON:0002346!3.35e-19!71;UBERON:0003075!3.35e-19!71;UBERON:0007284!3.35e-19!71;UBERON:0007811!6.26e-18!86;UBERON:0003080!2.61e-17!40;UBERON:0003056!8.02e-17!49;UBERON:0002780!1.27e-16!39;UBERON:0001890!1.27e-16!39;UBERON:0006240!1.27e-16!39;UBERON:0002020!8.38e-16!34;UBERON:0004121!3.27e-15!102;UBERON:0000924!3.27e-15!102;UBERON:0006601!3.27e-15!102;UBERON:0004111!2.93e-14!122;UBERON:0000153!3.73e-14!94;UBERON:0000025!1.53e-13!114;UBERON:0002791!3.07e-13!29;UBERON:0003528!3.07e-13!29;UBERON:0001893!3.07e-13!29;UBERON:0000477!4.73e-12!154;UBERON:0000483!1.92e-11!181;UBERON:0000119!2.54e-11!183;UBERON:0000956!5.33e-09!21;UBERON:0001869!5.33e-09!21;UBERON:0000203!5.33e-09!21;UBERON:0002619!4.45e-08!17;UBERON:0000475!3.27e-07!200;UBERON:0002021!8.53e-07!10;UBERON:0000411!8.53e-07!10;UBERON:0001950!8.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.06e-23,54;UBERON:0001049,1.44e-21,52;UBERON:0005068,1.44e-21,52;UBERON:0006241,1.44e-21,52;UBERON:0007135,1.44e-21,52;UBERON:0001016,1.53e-20,75;UBERON:0001017,3.14e-20,73;UBERON:0002346,3.84e-20,64;UBERON:0003075,3.84e-20,64;UBERON:0007284,3.84e-20,64;UBERON:0000955,8.02e-19,47;UBERON:0006238,8.02e-19,47;UBERON:0002616,3.52e-18,46;UBERON:0010314,1.29e-17,92;UBERON:0003080,2.61e-17,40;UBERON:0003056,8.02e-17,49;UBERON:0002780,1.27e-16,39;UBERON:0001890,1.27e-16,39;UBERON:0006240,1.27e-16,39;UBERON:0002020,8.38e-16,34;UBERON:0004121,1.87e-15,95;UBERON:0000924,1.87e-15,95;UBERON:0006601,1.87e-15,95;UBERON:0004111,2.93e-14,122;UBERON:0010371,3.79e-14,73;UBERON:0000025,1.53e-13,114;UBERON:0003528,3.07e-13,29;UBERON:0002791,3.07e-13,29;UBERON:0001893,3.07e-13,29;UBERON:0000483,3.26e-11,174;UBERON:0000119,4.37e-11,176;UBERON:0000956,5.33e-09,21;UBERON:0001869,5.33e-09,21;UBERON:0000203,5.33e-09,21;UBERON:0002619,4.45e-08,17;UBERON:0002021,8.53e-07,10;UBERON:0000411,8.53e-07,10;UBERON:0001950,8.53e-07,10 | |||
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| |||
|short_description=p1@Cds2 | |||
}} |
Revision as of 22:08, 13 September 2013
Short description: | p1@Cds2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cds2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000103181, ENSMUST00000110158, ENSMUST00000147456, NM_138651, uc008mmn.1, uc008mmo.1_5end |
EntrezGene: | Cds2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.38e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-10 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.