FFCP PHASE1:Mm9::chr19:34326266..34326311,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1172|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:34326266..34326311,-|id=chr19:34326266..34326311,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.29e-07,7;CL:0002453,2.18e-07,8;CL:0000680,6.25e-07,6;CL:0000187,6.25e-07,6;CL:0000056,6.25e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!4.36e-11!23;UBERON:0001009!4.36e-11!23;UBERON:0004872!1.82e-09!33;UBERON:0007100!1.71e-08!18;UBERON:0000948!1.71e-08!18;UBERON:0005498!1.71e-08!18;UBERON:0004140!1.71e-08!18;UBERON:0009881!1.71e-08!18;UBERON:0004141!1.71e-08!18;UBERON:0003084!1.71e-08!18;UBERON:0007005!1.71e-08!18;UBERON:0004139!1.71e-08!18;UBERON:0004291!1.71e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.58e-15,23;UBERON:0001009,1.58e-15,23;UBERON:0004872,1.11e-11,33;UBERON:0007100,1.58e-11,18;UBERON:0000948,1.58e-11,18;UBERON:0005498,1.58e-11,18;UBERON:0004140,1.58e-11,18;UBERON:0009881,1.58e-11,18;UBERON:0004141,1.58e-11,18;UBERON:0003084,1.58e-11,18;UBERON:0007005,1.58e-11,18;UBERON:0004139,1.58e-11,18;UBERON:0004291,1.58e-11,18|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,3.75094645512204,2.20256102594018,0,20.0583143870011,10.3252505885202,15.5543919259427,4.19959264876088,14.3752564364972,0,0,0,8.2323019531503,12.8940047972441,12.8918023069361,0,0,0,3.04960078862219,1.77858959222228,5.84934816232909,8.89979726310277,6.3943210345149,7.19040265244171,6.53171119046643,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0.421333260395256,23.1785238706159,35.8504686351959,15.1936017039446,0,2.56652954828636,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.741584903203122,7.08536848907567,0,0.970601099684455,0.441683036920787,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,2.44414473240759,1.24406970610093,0.758168275301024,0.420883711772948,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,1.86413195281952,1.40715635988658,2.70093092191522,3.07768156260773,1.37734962223183,2.31400669331067,3.25547522650571,1.3413670069981,1.16765342367169,2.46839774870221,2.13417703302824,1.13496333364198,1.75439984910399,3.07370161407471,0.536825675041487,0.210289948564127,0.102904612379284,0,0.528901133327089,1.2797295032114,2.55460339046482,2.70621668776396,2.21851877085677,1.77902435075896,2.85338439168839,4.2707615539006,2.14108641141214,2.76468729680296,2.98434708061726,2.14460495831032,1.79763881730844,2.80979464837102,2.98711909881551,0,0.342745537829186,1.1270773567308,1.4255592949172,0.581857461502877,0.911765658574141,0.505892296994058,0.295220295959204,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,1.29327233116623,0.947457058852424,0.651859905768103,1.86719594352707,0.938760993154008,0.837531287209079,0.714130922658041,0.585400943573396,0.945810864637146,1.7717175171902,1.2756381492599,0.327726629431476,0.518054945597687,0.578596234326046,0,0,2.95058563811422,1.37968373152366,0,0.117211686592203,1.14754461763673,0.252470927204373,1.26203287766503,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,2.33804686329049,0,0,2.55492153374884,0.35613120733451,0.651547837414304,2.96946221350564,1.32745138339963,0.242780636154981,0,0.188605079755898,0.885905678642318,0,0.258428293168221,0.363533729477506,1.42598951353889,2.21225730555071,0,0,0,0,0.646793418913773,0,0,0.178368817602071,0.164549020602121,1.522324745573,0,1.27099242518292,2.20528398054962,0,0,0.0603129249281559,0.477489376012546,0.328281799490123,2.62332752966866,0,0.341741761595705,0.619160603889667,0.370389054739423,0,0.27338845544205,0.228778173206523,0,0,0,13.3653886522116,0.316335993581135,3.04979200690273,4.96824567780286,6.690825472463,8.07941485860857,8.63131816862852,7.27350410382956,9.16145796944104,2.59229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0.496375471371293,0.583353565032143,1.54991788173277,0.675824501963113,0.58678619322877,1.3020438484395,0.629156066554265,0,0,0,0.202725215290164,0.308132871494482,0,0,0.39736270956253,0.120195449519969,0.295379054349154,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0.335769232728157,16.227925898704,5.2551093126331,5.12824547948342,1.2862102744744,2.50786052017682,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.888986911206461,0.618105171716683,0.962757628775446,0,1.01391719956096,0.754505365544305,0.8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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1172 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:34326266..34326311,- | |||
|id=chr19:34326266..34326311,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.29e-07,7;CL:0002453,2.18e-07,8;CL:0000680,6.25e-07,6;CL:0000187,6.25e-07,6;CL:0000056,6.25e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!4.36e-11!23;UBERON:0001009!4.36e-11!23;UBERON:0004872!1.82e-09!33;UBERON:0007100!1.71e-08!18;UBERON:0000948!1.71e-08!18;UBERON:0005498!1.71e-08!18;UBERON:0004140!1.71e-08!18;UBERON:0009881!1.71e-08!18;UBERON:0004141!1.71e-08!18;UBERON:0003084!1.71e-08!18;UBERON:0007005!1.71e-08!18;UBERON:0004139!1.71e-08!18;UBERON:0004291!1.71e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.58e-15,23;UBERON:0001009,1.58e-15,23;UBERON:0004872,1.11e-11,33;UBERON:0007100,1.58e-11,18;UBERON:0000948,1.58e-11,18;UBERON:0005498,1.58e-11,18;UBERON:0004140,1.58e-11,18;UBERON:0009881,1.58e-11,18;UBERON:0004141,1.58e-11,18;UBERON:0003084,1.58e-11,18;UBERON:0007005,1.58e-11,18;UBERON:0004139,1.58e-11,18;UBERON:0004291,1.58e-11,18 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,3.75094645512204,2.20256102594018,0,20.0583143870011,10.3252505885202,15.5543919259427,4.19959264876088,14.3752564364972,0,0,0,8.2323019531503,12.8940047972441,12.8918023069361,0,0,0,3.04960078862219,1.77858959222228,5.84934816232909,8.89979726310277,6.3943210345149,7.19040265244171,6.53171119046643,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0,0,2.6087803983151,0,0,0,0,0,0.421333260395256,23.1785238706159,35.8504686351959,15.1936017039446,0,2.56652954828636,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.741584903203122,7.08536848907567,0,0.970601099684455,0.441683036920787,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,2.44414473240759,1.24406970610093,0.758168275301024,0.420883711772948,0.130120442962704,0,0.360124259610698,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0.175951124163949,0.43839146485515,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,1.86413195281952,1.40715635988658,2.70093092191522,3.07768156260773,1.37734962223183,2.31400669331067,3.25547522650571,1.3413670069981,1.16765342367169,2.46839774870221,2.13417703302824,1.13496333364198,1.75439984910399,3.07370161407471,0.536825675041487,0.210289948564127,0.102904612379284,0,0.528901133327089,1.2797295032114,2.55460339046482,2.70621668776396,2.21851877085677,1.77902435075896,2.85338439168839,4.2707615539006,2.14108641141214,2.76468729680296,2.98434708061726,2.14460495831032,1.79763881730844,2.80979464837102,2.98711909881551,0,0.342745537829186,1.1270773567308,1.4255592949172,0.581857461502877,0.911765658574141,0.505892296994058,0.295220295959204,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,1.29327233116623,0.947457058852424,0.651859905768103,1.86719594352707,0.938760993154008,0.837531287209079,0.714130922658041,0.585400943573396,0.945810864637146,1.7717175171902,1.2756381492599,0.327726629431476,0.518054945597687,0.578596234326046,0,0,2.95058563811422,1.37968373152366,0,0.117211686592203,1.14754461763673,0.252470927204373,1.26203287766503,0.780877488593277,0.430846795465598,0,0,0,0.404810701674894,2.33804686329049,0,0,2.55492153374884,0.35613120733451,0.651547837414304,2.96946221350564,1.32745138339963,0.242780636154981,0,0.188605079755898,0.885905678642318,0,0.258428293168221,0.363533729477506,1.42598951353889,2.21225730555071,0,0,0,0,0.646793418913773,0,0,0.178368817602071,0.164549020602121,1.522324745573,0,1.27099242518292,2.20528398054962,0,0,0.0603129249281559,0.477489376012546,0.328281799490123,2.62332752966866,0,0.341741761595705,0.619160603889667,0.370389054739423,0,0.27338845544205,0.228778173206523,0,0,0,13.3653886522116,0.316335993581135,3.04979200690273,4.96824567780286,6.690825472463,8.07941485860857,8.63131816862852,7.27350410382956,9.16145796944104,2.59229946583586,1.24267862617385,0.56369293868419,0.149516546043979,0.496375471371293,0.583353565032143,1.54991788173277,0.675824501963113,0.58678619322877,1.3020438484395,0.629156066554265,0,0,0,0.202725215290164,0.308132871494482,0,0,0.39736270956253,0.120195449519969,0.295379054349154,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0.335769232728157,16.227925898704,5.2551093126331,5.12824547948342,1.2862102744744,2.50786052017682,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.888986911206461,0.618105171716683,0.962757628775446,0,1.01391719956096,0.754505365544305,0.842773567228942,1.02440243847791,0.746661096422973,0,0.347652977834566,0.578727661391115,0.824171801606613,1.32479028120958,1.02860775715625,0.70990322463735,0.238436189947321,0.726732083161643,1.2234219453993,0.676916863133412,0.548783918618318,0.526139422875686,1.08643291076689,0.561142271657738,0.830445126869219,0.886540341380071,0.818462086339379,0.929621047115796,0.771626443924566,0.999242311751784,0,0.429742108096597,1.3390183244819,0.882365676478062,0.463735671240843 | |||
|short_description=p@chr19:34326266..34326311,- | |||
}} |
Revision as of 17:26, 13 September 2013
Short description: | p@chr19:34326266..34326311, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:34326266..34326311, - |
Coexpression cluster: | MCL_coexpression_mm9:1172 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.29e-07 | 7 |
oligodendrocyte precursor cell | 2.18e-07 | 8 |
muscle precursor cell | 6.25e-07 | 6 |
muscle cell | 6.25e-07 | 6 |
myoblast | 6.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.58e-15 | 23 |
circulatory system | 1.58e-15 | 23 |
splanchnic layer of lateral plate mesoderm | 1.11e-11 | 33 |
primary circulatory organ | 1.58e-11 | 18 |
heart | 1.58e-11 | 18 |
primitive heart tube | 1.58e-11 | 18 |
primary heart field | 1.58e-11 | 18 |
anterior lateral plate mesoderm | 1.58e-11 | 18 |
heart tube | 1.58e-11 | 18 |
heart primordium | 1.58e-11 | 18 |
cardiac mesoderm | 1.58e-11 | 18 |
cardiogenic plate | 1.58e-11 | 18 |
heart rudiment | 1.58e-11 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.