FFCP PHASE1:Hg19::chr22:39493235..39493261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=164668 | |EntrezGene=164668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24100 | |HGNC=24100 | ||
|TSSclassifier=S | |||
|UniProt=E9PF38,Q6NTF7,B7TQM5,B7TQM9,B7TQM3 | |UniProt=E9PF38,Q6NTF7,B7TQM5,B7TQM9,B7TQM3 | ||
|association_with_transcript=6bp_to_ENST00000348946,ENST00000421988,ENST00000442487,NM_001166002,NM_001166003,NM_001166004,NM_181773_5end | |association_with_transcript=6bp_to_ENST00000348946,ENST00000421988,ENST00000442487,NM_001166002,NM_001166003,NM_001166004,NM_181773_5end |
Revision as of 10:11, 9 July 2013
Short description: | p2@APOBEC3H |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_APOBEC3H_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 6bp_to_ENST00000348946, ENST00000421988, ENST00000442487, NM_001166002, NM_001166003, NM_001166004, NM_181773_5end |
EntrezGene: | APOBEC3H |
HGNC: | 24100 |
UniProt: | E9PF38Q6NTF7B7TQM5B7TQM9B7TQM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@APOBEC3H |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.99e-49 | 52 |
lymphocyte | 5.86e-48 | 53 |
common lymphoid progenitor | 5.86e-48 | 53 |
T cell | 2.43e-41 | 25 |
pro-T cell | 2.43e-41 | 25 |
mature alpha-beta T cell | 2.60e-41 | 18 |
alpha-beta T cell | 2.60e-41 | 18 |
immature T cell | 2.60e-41 | 18 |
mature T cell | 2.60e-41 | 18 |
immature alpha-beta T cell | 2.60e-41 | 18 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
blood | 3.02e-07 | 15 |
haemolymphatic fluid | 3.02e-07 | 15 |
organism substance | 3.02e-07 | 15 |
Showing 1 to 3 of 3 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.