FFCP PHASE1:Hg19::chr15:29131103..29131186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=321 | |EntrezGene=321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=579 | |HGNC=579 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558330,ENST00000558402,uc010azj.2,uc010uas.1,uc010uat.1_5end | |association_with_transcript=0bp_to_ENST00000558330,ENST00000558402,uc010azj.2,uc010uas.1,uc010uat.1_5end | ||
Revision as of 20:41, 6 July 2013
| Short description: | p2@APBA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_APBA2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000558330, ENST00000558402, uc010azj.2, uc010uas.1, uc010uat.1_5end |
| EntrezGene: | APBA2 |
| HGNC: | 579 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@APBA2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 7.42e-17 | 121 |
| endothelial cell | 3.96e-12 | 36 |
| meso-epithelial cell | 8.41e-12 | 45 |
| endothelial cell of vascular tree | 1.38e-10 | 24 |
| lining cell | 1.71e-10 | 58 |
| barrier cell | 1.71e-10 | 58 |
| embryonic cell | 7.45e-10 | 250 |
| blood vessel endothelial cell | 4.78e-08 | 18 |
| embryonic blood vessel endothelial progenitor cell | 4.78e-08 | 18 |
| epithelial cell of nephron | 6.71e-08 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 1.37e-21 | 89 |
| central nervous system | 2.02e-21 | 81 |
| cell layer | 4.74e-21 | 309 |
| epithelium | 2.48e-20 | 306 |
| tube | 8.22e-19 | 192 |
| neural plate | 1.15e-18 | 82 |
| presumptive neural plate | 1.15e-18 | 82 |
| neurectoderm | 1.37e-18 | 86 |
| brain | 2.06e-17 | 68 |
| future brain | 2.06e-17 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
