UBERON:0002199: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 10: | Line 10: | ||
|has_quality= | |has_quality= | ||
|id=UBERON:0002199 | |id=UBERON:0002199 | ||
|is_a=UBERON:0003102 | |is_a=UBERON:0003102 ;;UBERON:0011216 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
Revision as of 11:12, 12 September 2014
| Name: | integument | ||
|---|---|---|---|
| Definition: | "The dermis, epidermis and hypodermis." [Wikipedia:Integument] | ||
| Xrefs: |
| ||
| Synonyms: |
"dermal system" RELATED [BTO:0000634] "dermoid system" RELATED [BTO:0000634] "Hautsystem" RELATED [BTO:0000634] "integumentum commune" EXACT [FMA:74657, FMA:TA] "skin" RELATED [] "tegument" RELATED [BTO:0000634] "the integument" EXACT [FMA:74657] | ||
| Comments: | Usage notes: in FMA intergument | ||
| Alt_id: | UBERON:FMA_74657-ZFA_0000368 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003102(surface structure),UBERON:0011216(organ system subdivision) |
|---|---|
| part_of: | UBERON:0002416(integumental system) |
Children
| is a: | FF:0011174 (Skin - armpit hair follicle),FF:0011178 (Skin - torso) |
|---|---|
| part of: | UBERON:0002072 (hypodermis),UBERON:0002097 (skin of body),UBERON:0010083 (future dermis),UBERON:0011272 (embryonic skin basal layer),UBERON:3000961 (external integument structure) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
... further results Mouse (Mus musculus)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10273-104E3
- 10283-104F4
- 10284-104F5
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10287-104F8
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002199 (integument), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.4e-86 | FFCP PHASE1:Mm9::chr11:36246521..36246530,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr11:36246521..36246530, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr1:191609138..191609151,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr1:191609138..191609151, + |
| 1.4e-86 | FFCP PHASE2:Mm9::chr11:94981134..94981147,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p2@Dlx3 |
| 1.4e-86 | FFCP PHASE2:Mm9::chr4:113836042..113836053,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p2@Skint11 |
| 1.4e-86 | FFCP PHASE2:Mm9::chr15:101593988..101593997,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p1@Krt74 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr11:94981134..94981147,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p2@Dlx3 |
| 1.4e-86 | FFCP PHASE2:Mm9::chr4:138313406..138313411,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p2@Pla2g2f |
| 1.4e-86 | FFCP PHASE2:Mm9::chr11:99227413..99227429,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr11:99227413..99227429, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr4:113836063..113836075,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p1@Skint11 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr11:99227413..99227429,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr11:99227413..99227429, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr4:113836042..113836053,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p2@Skint11 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr4:138313406..138313411,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p2@Pla2g2f |
| 1.4e-86 | FFCP PHASE1:Mm9::chr13:113381448..113381495,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr13:113381448..113381495, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr5:137057540..137057550,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr5:137057540..137057550, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr4:113836063..113836075,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p1@Skint11 |
| 1.4e-86 | FFCP PHASE1:Mm9::chr1:191609138..191609151,+#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr1:191609138..191609151, + |
| 1.4e-86 | FFCP PHASE2:Mm9::chr11:36246521..36246530,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr11:36246521..36246530, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr5:137057540..137057550,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr5:137057540..137057550, - |
| 1.4e-86 | FFCP PHASE2:Mm9::chr13:113381448..113381495,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p@chr13:113381448..113381495, - |
| 1.4e-86 | FFCP PHASE1:Mm9::chr15:101593988..101593997,-#_8b0ea39ddfae93ef697c8ee0b5cdf425 | p1@Krt74 |
| 1.07e-72 | FFCP PHASE2:Mm9::chr5:137057441..137057450,-#_961ed09addc5c6652f4870e702679aac | p@chr5:137057441..137057450, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr5:137057441..137057450,-#_961ed09addc5c6652f4870e702679aac | p@chr5:137057441..137057450, - |
| 1.07e-72 | FFCP PHASE2:Mm9::chr7:97432305..97432311,+#_961ed09addc5c6652f4870e702679aac | p@chr7:97432305..97432311, + |
| 1.07e-72 | FFCP PHASE2:Mm9::chr5:137057490..137057506,-#_961ed09addc5c6652f4870e702679aac | p@chr5:137057490..137057506, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr5:137057490..137057506,-#_961ed09addc5c6652f4870e702679aac | p@chr5:137057490..137057506, - |
| 1.07e-72 | FFCP PHASE2:Mm9::chr1:133938531..133938534,-#_961ed09addc5c6652f4870e702679aac | p6@Mfsd4 |
| 1.07e-72 | FFCP PHASE1:Mm9::chr1:133938531..133938534,-#_961ed09addc5c6652f4870e702679aac | p6@Mfsd4 |
| 1.07e-72 | FFCP PHASE1:Mm9::chr1:46949894..46949911,-#_961ed09addc5c6652f4870e702679aac | p@chr1:46949894..46949911, - |
| 1.07e-72 | FFCP PHASE2:Mm9::chr3:90343597..90343613,+#_961ed09addc5c6652f4870e702679aac | p@chr3:90343597..90343613, + |
| 1.07e-72 | FFCP PHASE2:Mm9::chr15:83953604..83953633,-#_961ed09addc5c6652f4870e702679aac | p1@Pnpla5 |
| 1.07e-72 | FFCP PHASE1:Mm9::chr3:90343597..90343613,+#_961ed09addc5c6652f4870e702679aac | p@chr3:90343597..90343613, + |
| 1.07e-72 | FFCP PHASE1:Mm9::chr15:83953604..83953633,-#_961ed09addc5c6652f4870e702679aac | p1@Pnpla5 |
| 1.07e-72 | FFCP PHASE2:Mm9::chr11:99207849..99207853,-#_961ed09addc5c6652f4870e702679aac | p@chr11:99207849..99207853, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr11:99207849..99207853,-#_961ed09addc5c6652f4870e702679aac | p@chr11:99207849..99207853, - |
| 1.07e-72 | FFCP PHASE1:Mm9::chr7:97432305..97432311,+#_961ed09addc5c6652f4870e702679aac | p@chr7:97432305..97432311, + |
| 1.07e-72 | FFCP PHASE2:Mm9::chr1:46949894..46949911,-#_961ed09addc5c6652f4870e702679aac | p@chr1:46949894..46949911, - |
| 1.07e-72 | FFCP PHASE2:Mm9::chr7:127260268..127260277,+#_961ed09addc5c6652f4870e702679aac | p@chr7:127260268..127260277, + |
| 1.07e-72 | FFCP PHASE1:Mm9::chr7:127260268..127260277,+#_961ed09addc5c6652f4870e702679aac | p@chr7:127260268..127260277, + |
| 1.5e-72 | FFCP PHASE2:Mm9::chr1:37973330..37973344,-#_25ea365b38357d62a79efd8ee149e419 | p1@Lyg2 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr15:25672069..25672077,+#_25ea365b38357d62a79efd8ee149e419 | p25@Myo10 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr13:112045218..112045226,+#_25ea365b38357d62a79efd8ee149e419 | p1@Actbl2 |
| 1.5e-72 | FFCP PHASE2:Mm9::chr6:97778311..97778326,+#_25ea365b38357d62a79efd8ee149e419 | p@chr6:97778311..97778326, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr3:138004932..138004945,+#_25ea365b38357d62a79efd8ee149e419 | p@chr3:138004932..138004945, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr6:97778311..97778326,+#_25ea365b38357d62a79efd8ee149e419 | p@chr6:97778311..97778326, + |
| 1.5e-72 | FFCP PHASE2:Mm9::chr13:112045218..112045226,+#_25ea365b38357d62a79efd8ee149e419 | p1@Actbl2 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr1:37973257..37973271,-#_25ea365b38357d62a79efd8ee149e419 | p2@Lyg2 |
| 1.5e-72 | FFCP PHASE2:Mm9::chr6:134595955..134595965,-#_25ea365b38357d62a79efd8ee149e419 | p@chr6:134595955..134595965, - |
| 1.5e-72 | FFCP PHASE2:Mm9::chr10:43724117..43724131,-#_25ea365b38357d62a79efd8ee149e419 | p@chr10:43724117..43724131, - |
| 1.5e-72 | FFCP PHASE1:Mm9::chr10:43724117..43724131,-#_25ea365b38357d62a79efd8ee149e419 | p@chr10:43724117..43724131, - |
| 1.5e-72 | FFCP PHASE2:Mm9::chr1:37973257..37973271,-#_25ea365b38357d62a79efd8ee149e419 | p2@Lyg2 |
| 1.5e-72 | FFCP PHASE2:Mm9::chr3:138004932..138004945,+#_25ea365b38357d62a79efd8ee149e419 | p@chr3:138004932..138004945, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr1:37973330..37973344,-#_25ea365b38357d62a79efd8ee149e419 | p1@Lyg2 |
| 1.5e-72 | FFCP PHASE2:Mm9::chr15:25672069..25672077,+#_25ea365b38357d62a79efd8ee149e419 | p25@Myo10 |
| 1.5e-72 | FFCP PHASE1:Mm9::chr10:66991117..66991146,+#_25ea365b38357d62a79efd8ee149e419 | p@chr10:66991117..66991146, + |
| 1.5e-72 | FFCP PHASE2:Mm9::chr10:66991117..66991146,+#_25ea365b38357d62a79efd8ee149e419 | p@chr10:66991117..66991146, + |
| 1.5e-72 | FFCP PHASE1:Mm9::chr6:134595955..134595965,-#_25ea365b38357d62a79efd8ee149e419 | p@chr6:134595955..134595965, - |
| 2.1e-72 | FFCP PHASE1:Mm9::chr1:89485356..89485361,+#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p@chr1:89485356..89485361, + |
| 2.1e-72 | FFCP PHASE2:Mm9::chr4:82496625..82496637,-#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p6@Zdhhc21 |
| 2.1e-72 | FFCP PHASE1:Mm9::chr4:111707315..111707319,+#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p@chr4:111707315..111707319, + |
| 2.1e-72 | FFCP PHASE2:Mm9::chr1:89485356..89485361,+#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p@chr1:89485356..89485361, + |
| 2.1e-72 | FFCP PHASE2:Mm9::chr4:111707315..111707319,+#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p@chr4:111707315..111707319, + |
| 2.1e-72 | FFCP PHASE2:Mm9::chr7:117436977..117436981,-#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p@chr7:117436977..117436981, - |
| 2.1e-72 | FFCP PHASE1:Mm9::chr4:82496625..82496637,-#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p6@Zdhhc21 |
| 2.1e-72 | FFCP PHASE1:Mm9::chr7:117436977..117436981,-#_617f0c191d2ba2c79ad22c4c0c2ff6fe | p@chr7:117436977..117436981, - |
| 4.13e-72 | FFCP PHASE2:Mm9::chr4:113672105..113672116,-#_9761685c0b2811dc127fe076c8e511c3 | p1@Skint5 |
| 4.13e-72 | FFCP PHASE1:Mm9::chr4:113672105..113672116,-#_9761685c0b2811dc127fe076c8e511c3 | p1@Skint5 |
| 1.65e-69 | FFCP PHASE2:Mm9::chr4:57351817..57351823,-#_af8605b327532c752689e489328e6bdc | p@chr4:57351817..57351823, - |
| 1.65e-69 | FFCP PHASE1:Mm9::chr3:93248697..93248704,+#_af8605b327532c752689e489328e6bdc | p@chr3:93248697..93248704, + |
| 1.65e-69 | FFCP PHASE2:Mm9::chr5:75107109..75107125,-#_af8605b327532c752689e489328e6bdc | p@chr5:75107109..75107125, - |
| 1.65e-69 | FFCP PHASE2:Mm9::chr11:99913595..99913606,+#_af8605b327532c752689e489328e6bdc | p1@ENSMUST00000136820, p1@uc007lke.1 |
| 1.65e-69 | FFCP PHASE2:Mm9::chr9:43876286..43876293,+#_af8605b327532c752689e489328e6bdc | p@chr9:43876286..43876293, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr4:135527809..135527823,-#_af8605b327532c752689e489328e6bdc | p4@Lypla2 |
| 1.65e-69 | FFCP PHASE1:Mm9::chr19:59989963..59989986,-#_af8605b327532c752689e489328e6bdc | p@chr19:59989963..59989986, - |
| 1.65e-69 | FFCP PHASE1:Mm9::chr5:75107109..75107125,-#_af8605b327532c752689e489328e6bdc | p@chr5:75107109..75107125, - |
| 1.65e-69 | FFCP PHASE2:Mm9::chr18:20631745..20631746,+#_af8605b327532c752689e489328e6bdc | p@chr18:20631745..20631746, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr3:93249140..93249149,+#_af8605b327532c752689e489328e6bdc | p@chr3:93249140..93249149, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr14:21082655..21082682,-#_af8605b327532c752689e489328e6bdc | p@chr14:21082655..21082682, - |
| 1.65e-69 | FFCP PHASE2:Mm9::chr11:115168521..115168541,+#_af8605b327532c752689e489328e6bdc | p1@Otop2 |
| 1.65e-69 | FFCP PHASE2:Mm9::chr3:59629633..59629644,+#_af8605b327532c752689e489328e6bdc | p@chr3:59629633..59629644, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr4:144311356..144311370,-#_af8605b327532c752689e489328e6bdc | p2@Gm13178 |
| 1.65e-69 | FFCP PHASE2:Mm9::chr3:93247552..93247564,+#_af8605b327532c752689e489328e6bdc | p@chr3:93247552..93247564, + |
| 1.65e-69 | FFCP PHASE2:Mm9::chr19:59989963..59989986,-#_af8605b327532c752689e489328e6bdc | p@chr19:59989963..59989986, - |
| 1.65e-69 | FFCP PHASE1:Mm9::chr3:93247552..93247564,+#_af8605b327532c752689e489328e6bdc | p@chr3:93247552..93247564, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr2:129949046..129949050,+#_af8605b327532c752689e489328e6bdc | p2@Tgm6 |
| 1.65e-69 | FFCP PHASE1:Mm9::chr11:95086849..95086855,-#_af8605b327532c752689e489328e6bdc | p3@ENSMUST00000150818 |
| 1.65e-69 | FFCP PHASE2:Mm9::chr4:82496602..82496610,-#_af8605b327532c752689e489328e6bdc | p8@Zdhhc21 |
| 1.65e-69 | FFCP PHASE2:Mm9::chr6:142831327..142831375,+#_af8605b327532c752689e489328e6bdc | p@chr6:142831327..142831375, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr3:93249391..93249400,+#_af8605b327532c752689e489328e6bdc | p@chr3:93249391..93249400, + |
| 1.65e-69 | FFCP PHASE2:Mm9::chr11:95086849..95086855,-#_af8605b327532c752689e489328e6bdc | p3@ENSMUST00000150818 |
| 1.65e-69 | FFCP PHASE1:Mm9::chr16:56831979..56831988,-#_af8605b327532c752689e489328e6bdc | p13@Tmem45a |
| 1.65e-69 | FFCP PHASE2:Mm9::chr9:67169769..67169780,-#_af8605b327532c752689e489328e6bdc | p@chr9:67169769..67169780, - |
| 1.65e-69 | FFCP PHASE2:Mm9::chr14:57868950..57868959,+#_af8605b327532c752689e489328e6bdc | p@chr14:57868950..57868959, + |
| 1.65e-69 | FFCP PHASE2:Mm9::chr3:93248697..93248704,+#_af8605b327532c752689e489328e6bdc | p@chr3:93248697..93248704, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr19:25196775..25196781,+#_af8605b327532c752689e489328e6bdc | p@chr19:25196775..25196781, + |
| 1.65e-69 | FFCP PHASE2:Mm9::chr5:81472249..81472294,+#_af8605b327532c752689e489328e6bdc | p@chr5:81472249..81472294, + |
| 1.65e-69 | FFCP PHASE2:Mm9::chr3:93250018..93250027,+#_af8605b327532c752689e489328e6bdc | p@chr3:93250018..93250027, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr11:99957587..99957593,-#_af8605b327532c752689e489328e6bdc | p2@Krt35 |
| 1.65e-69 | FFCP PHASE2:Mm9::chr1:129125186..129125194,+#_af8605b327532c752689e489328e6bdc | p@chr1:129125186..129125194, + |
| 1.65e-69 | FFCP PHASE1:Mm9::chr9:67169769..67169780,-#_af8605b327532c752689e489328e6bdc | p@chr9:67169769..67169780, - |
| 1.65e-69 | FFCP PHASE2:Mm9::chr4:135527809..135527823,-#_af8605b327532c752689e489328e6bdc | p4@Lypla2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system that protects the body from damage, comprising the skin and its appendages.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Surface structure that is the outer protective covering of the body.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "The outer protective barrier that separates the animal from its aquatic environment. Le Guellec et al, 2004.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
