NonredundantMotifs:139

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known139
• db :UNIPROBE
• Id :IRC900814_secondary
• name :SCI09
• score :0.030254683447303803
  
• External refs:

EntrezGene:-
UniProt:-

• Internal refs:

EntrezGene:-

Motif matrix

P0 A C G T 1 0.496666921976636 0.10407844914393 0.236214274522671 0.163040354356763 2 0.0820334710420337 0.304370473441089 0.165032926622677 0.4485631288942 3 0.15135503680645 0.178363441728518 0.427593052614317 0.242688468850715 4 0.233976039370959 0.129049318640764 0.431344527076636 0.205630114911641 5 0.745700082870791 0.0248773434942679 0.173505588014018 0.0559169856209227 6 0.913518490017926 0.0167373974334058 0.0653825265624831 0.00436158598618471 7 0.908346073888505 0.0579099344504177 0.0062598789383626 0.0274841127227147 8 0.037556388879504 0.0399780488498697 0.546703798664305 0.375761763606321 9 0.0224924249906296 0.0730678242396094 0.00742201887354174 0.897017731896219 10 0.0050206507231578 0.974012928713715 0.00582899695995376 0.0151374236031732 11 0.00858278908887625 0.0036471415704455 0.977840737315154 0.0099293320255245 12 0.0156298558662332 0.0314258339242533 0.0304389561512386 0.922505354058275 13 0.510810681996868 0.0712618421034248 0.345998635161779 0.0719288407379282 14 0.624552595560613 0.0864273568491382 0.143753138690439 0.145266908899809 15 0.50745463839472 0.188137848792644 0.198382102951514 0.106025409861122 16 0.496226671434977 0.137735214058478 0.132523474001183 0.233514640505362