NonredundantMotifs:73: Difference between revisions
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;64.53118384289618;176.86977826365768;179.6255056461786;59.41588065163906!2;145.1768517440704;140.45770012659798;146.42555384973122;48.38224268397243!3;48.38224268397243;120.84903789344601;270.50177992986755;40.70928789708682!4;77.36896076776158;149.83575597723566;214.23344482604054;39.00418683333446!5;52.644995343352974;134.48984640346472;246.63036503733505;46.67714162021992!6;56.907748002734;179.47694880600977;163.47656448725434;80.58108710837391!7;70.54855651275223;226.169152272307;113.17608310656055;70.54855651275223!8;43.053801859746244;188.6418670236783;163.26342685428568;85.48325266666188!9;34.52829654098463;279.6666981475361;95.91193483606827;70.33541887978355!10;477.0321462768637;1.7051010637523236;0.8525505318761618;0.8525505318761618!11;1.7051010637523236;1.7051010637523236;477.0321462768637;0.0!12;0.0;0.8525505318761618;479.58979787249206;0.0!13;0.0;477.8846968087398;2.5576515956284904;0.0!14;0.8525505318761618;425.22463961931174;42.429450806915746;11.935707446266296!15;9.378055850637775;156.67122207832205;127.88257978142452;186.51049069398826!16;108.48705518124171;196.9542347094712;144.09610173314812;30.904956780510947!17;96.55134773497524;3.623339760473694;374.0866695528189;6.180991356102199!18;66.51400333241739;164.55731449817665;238.927286558296;10.443744015482984!19;60.907844082422606;251.8791632226845;59.20274301867039;108.45259808059501 | |||
|entrez_gene_id=7543 | |entrez_gene_id=7543 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0146.1;Zfx | |motif_cluster_2013_march_motif_members= /JASPAR:MA0146.1;Zfx /HOMER:ZFX_mES-Zfx-ChIP-Seq~ZNF711_SH-SY5Y-ZNF711-ChIP-Seq /HOCOMOCO:ZFX_f1 | ||
|name=known73 | |name=known73 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
Revision as of 10:46, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known73
- db :HOCOMOCO
- Id :ZFX_f1
- name :
- score :3.257777619840949
- External refs:
- Internal refs:
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Sub Motif Members
