NonredundantMotifs:85

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known85
• db :SWISSREGULON
• Id :EVI1.p2
• name  :
• score :0.07896497249634593
  
• External refs:

• Internal refs:

Motif matrix

PO A C G T 1 111.999089 10.282831 34.622885 26.832715 2 150.824301 0 16.413455 16.499764 3 5.50275 5.726982 164.213447 8.294341 4 173.76799 5.312885 1.928852 2.727793 5 37.835213 71.167831 5.398375 69.336101 6 178.099433 1.940236 3.697851 0 7 161.884421 0 20.142677 1.710422 8 6.247784 2.603933 173.045476 1.840327 9 175.46784 0.861074 6.566768 0.841838 10 12.80888 35.686617 2.695602 132.546421 11 157.550982 7.317279 6.402303 12.466956 12 162.222251 0 21.515269 0 13 60.364844 37.526971 45.763322 40.082383 14 118.568823 29.171465 21.922535 14.074697