FFCP PHASE1:Hg19::chr1:20113572..20113583,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=255104|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=27393|TSSclassifier=S|UniProt=|association_with_transcript=-5bp_to_AK309900_5end|coexpression_cluster_id=C43|description=CAGE_peak_11_at_TMCO4_5end|id=chr1:20113572..20113583,-|ontology_enrichment_celltype=CL:0002541!2.49e-07!3;CL:0000039!4.04e-07!7;CL:0000586!4.04e-07!7|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;8.69e-23;2!UBERON:0005754;2.63e-12;1!UBERON:0003124;5.32e-12;1!UBERON:0008425;1.19e-11;1!UBERON:0007123;1.58e-09;5|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1325;5.34e-07;7!DOID:3904;5.34e-07;7|ontology_enrichment_disease_v019_2=DOID:1325,5.67e-07,7;DOID:3904,5.67e-07,7|ontology_enrichment_uberon=UBERON:0003135!2.49e-09!11;UBERON:0004119!2.50e-09!169;UBERON:0000925!2.50e-09!169;UBERON:0006595!2.50e-09!169;UBERON:0005631!3.43e-09!14;UBERON:0000158!3.43e-09!14;UBERON:0006947!1.40e-08!3;UBERON:0004054!1.40e-08!3;UBERON:0003101!2.77e-08!22;UBERON:0000079!2.77e-08!22;UBERON:0003124!4.26e-08!7;UBERON:0000464!9.56e-08!104;UBERON:0005156!1.36e-07!59;UBERON:0000990!1.36e-07!59;UBERON:0000077!1.56e-07!130;UBERON:0001007!1.88e-07!155;UBERON:0001555!1.88e-07!155;UBERON:0007026!1.88e-07!155;UBERON:0000476!2.49e-07!3;UBERON:0000920!2.49e-07!3;UBERON:0003133!8.41e-07!48;UBERON:0004921!9.06e-07!129;UBERON:0004185!9.06e-07!129|ontology_enrichment_uberon_v019=UBERON:0006947;3.48e-33;3!UBERON:0004054;3.48e-33;3!UBERON:0005904;4.53e-25;4!UBERON:0000058;1.47e-17;10!UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0001301;2.93e-12;1!UBERON:0001000;3.27e-12;1!UBERON:0005352;3.27e-12;1!UBERON:0002046;1.58e-09;5!UBERON:0003135;1.74e-09;11!UBERON:0004175;2.09e-08;21!UBERON:0003101;4.32e-08;22!UBERON:0000079;4.32e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.49e-33,3;UBERON:0004054,3.49e-33,3;UBERON:0005904,4.54e-25,4;UBERON:0000998,2.63e-12,1;UBERON:0006868,2.63e-12,1;UBERON:0001301,2.93e-12,1;UBERON:0001000,3.27e-12,1;UBERON:0005352,3.27e-12,1;UBERON:0004175,1.40e-10,25;UBERON:0002046,1.42e-09,5;UBERON:0004117,1.42e-09,5;UBERON:0007689,1.42e-09,5;UBERON:0007123,1.42e-09,5;UBERON:0003091,1.42e-09,5;UBERON:0003135,1.74e-09,11;UBERON:0000058,2.55e-09,19;UBERON:0003101,4.36e-08,22;UBERON:0000079,4.36e-08,22;UBERON:0003124,6.98e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.41215701165169,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,1.57427999993152,0,0.227586896570999,2.03402920234213,2.36387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0.46112780877612,0.359030577639089,0.217294743844016,0.957003479195758,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,1.79556088975062,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70793484843964,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,1.04135843001079,0,0,7.16379339792324,0,0,0,0,0.484945082442097,0,0,0,0,0,0.391102765469606,0.160317640503067,0,0,0.288180834308212,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.137539436597234,0.415440338029185,0,0,0,0,0.86686278029118,2.51782023047991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0.150420656698515,0,0,0.7857200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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=255104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=27393 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_AK309900_5end | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_11_at_TMCO4_5end | |||
|id=chr1:20113572..20113583,- | |||
|ontology_enrichment_celltype=CL:0002541!2.49e-07!3;CL:0000039!4.04e-07!7;CL:0000586!4.04e-07!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.69e-23;2!UBERON:0005754;2.63e-12;1!UBERON:0003124;5.32e-12;1!UBERON:0008425;1.19e-11;1!UBERON:0007123;1.58e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;5.34e-07;7!DOID:3904;5.34e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,5.67e-07,7;DOID:3904,5.67e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.49e-09!11;UBERON:0004119!2.50e-09!169;UBERON:0000925!2.50e-09!169;UBERON:0006595!2.50e-09!169;UBERON:0005631!3.43e-09!14;UBERON:0000158!3.43e-09!14;UBERON:0006947!1.40e-08!3;UBERON:0004054!1.40e-08!3;UBERON:0003101!2.77e-08!22;UBERON:0000079!2.77e-08!22;UBERON:0003124!4.26e-08!7;UBERON:0000464!9.56e-08!104;UBERON:0005156!1.36e-07!59;UBERON:0000990!1.36e-07!59;UBERON:0000077!1.56e-07!130;UBERON:0001007!1.88e-07!155;UBERON:0001555!1.88e-07!155;UBERON:0007026!1.88e-07!155;UBERON:0000476!2.49e-07!3;UBERON:0000920!2.49e-07!3;UBERON:0003133!8.41e-07!48;UBERON:0004921!9.06e-07!129;UBERON:0004185!9.06e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.48e-33;3!UBERON:0004054;3.48e-33;3!UBERON:0005904;4.53e-25;4!UBERON:0000058;1.47e-17;10!UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0001301;2.93e-12;1!UBERON:0001000;3.27e-12;1!UBERON:0005352;3.27e-12;1!UBERON:0002046;1.58e-09;5!UBERON:0003135;1.74e-09;11!UBERON:0004175;2.09e-08;21!UBERON:0003101;4.32e-08;22!UBERON:0000079;4.32e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.49e-33,3;UBERON:0004054,3.49e-33,3;UBERON:0005904,4.54e-25,4;UBERON:0000998,2.63e-12,1;UBERON:0006868,2.63e-12,1;UBERON:0001301,2.93e-12,1;UBERON:0001000,3.27e-12,1;UBERON:0005352,3.27e-12,1;UBERON:0004175,1.40e-10,25;UBERON:0002046,1.42e-09,5;UBERON:0004117,1.42e-09,5;UBERON:0007689,1.42e-09,5;UBERON:0007123,1.42e-09,5;UBERON:0003091,1.42e-09,5;UBERON:0003135,1.74e-09,11;UBERON:0000058,2.55e-09,19;UBERON:0003101,4.36e-08,22;UBERON:0000079,4.36e-08,22;UBERON:0003124,6.98e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.41215701165169,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,1.57427999993152,0,0.227586896570999,2.03402920234213,2.36387681767936,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0.46112780877612,0.359030577639089,0.217294743844016,0.957003479195758,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,1.79556088975062,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70793484843964,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,1.04135843001079,0,0,7.16379339792324,0,0,0,0,0.484945082442097,0,0,0,0,0,0.391102765469606,0.160317640503067,0,0,0.288180834308212,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.137539436597234,0.415440338029185,0,0,0,0,0.86686278029118,2.51782023047991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994581110581374,0.150420656698515,0,0,0.785720083444267,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,2.30626162422861,0,0,0,0,0,0.111231401892069,2.35479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,9.73790215439137,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0.378893491091197,0,0,0,0.426467963801962,1.66645102024618,0,0.0620747142958579,0,3.50059370529907,2.82964064541507,0,0.342233301085281,0.606168477131288,0.358611026963382,0.332660356546013,0.162806537221949,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p11@TMCO4 | |||
}} |
Revision as of 02:43, 12 September 2013
Short description: | p11@TMCO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_TMCO4_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -5bp_to_AK309900_5end |
EntrezGene: | TMCO4 |
HGNC: | 27393 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.49e-33 | 3 |
internal male genitalia | 3.49e-33 | 3 |
duct of male reproductive system | 4.54e-25 | 4 |
seminal vesicle | 2.63e-12 | 1 |
seminal fluid secreting gland | 2.63e-12 | 1 |
epididymis | 2.93e-12 | 1 |
vas deferens | 3.27e-12 | 1 |
spermatic cord | 3.27e-12 | 1 |
internal genitalia | 1.40e-10 | 25 |
thyroid gland | 1.42e-09 | 5 |
pharyngeal pouch | 1.42e-09 | 5 |
thyroid diverticulum | 1.42e-09 | 5 |
pharyngeal pouch 2 | 1.42e-09 | 5 |
thyroid primordium | 1.42e-09 | 5 |
male reproductive organ | 1.74e-09 | 11 |
duct | 2.55e-09 | 19 |
male organism | 4.36e-08 | 22 |
male reproductive system | 4.36e-08 | 22 |
chorion | 6.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 5.67e-07 | 7 |
bronchogenic carcinoma | 5.67e-07 | 7 |
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