FFCP PHASE1:Hg19::chr1:109242263..109242272,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55119|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=25512|TSSclassifier=S|UniProt=Q5VTL8|association_with_transcript=59bp_to_AY211915_5end|description=CAGE_peak_10_at_PRPF38B_5end|id=chr1:109242263..109242272,+|ontology_enrichment_celltype=CL:0002032!6.74e-15!165;CL:0000837!6.74e-15!165;CL:0002087!1.86e-14!119;CL:0000037!2.47e-14!172;CL:0000566!2.47e-14!172;CL:0000738!1.31e-13!140;CL:0002031!2.48e-13!124;CL:0000988!3.66e-12!182;CL:0000860!9.42e-10!45;CL:0002057!1.08e-08!42;CL:0000763!4.35e-08!112;CL:0000049!4.35e-08!112;CL:0002194!1.17e-07!63;CL:0000576!1.17e-07!63;CL:0000040!1.17e-07!63;CL:0000559!1.17e-07!63;CL:0000542!1.33e-07!53;CL:0000051!1.33e-07!53;CL:0002009!1.70e-07!65;CL:0000766!1.98e-07!76;CL:0000838!3.21e-07!52;CL:0000839!3.63e-07!70;CL:0000557!8.11e-07!71|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0002032,7.63e-11,161;CL:0000837,7.63e-11,161;CL:0000037,8.96e-11,168;CL:0000988,1.03e-09,177;CL:0000738,1.99e-09,136;CL:0002087,7.11e-09,115;CL:0000542,1.15e-07,53;CL:0000051,1.15e-07,53;CL:0002031,1.65e-07,120;CL:0000838,6.60e-07,52|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!5.43e-07!51;DOID:0060083!5.43e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.821246550437305,0.627713197974014,0.687720651731561,0.410502947249729,0.629686250509434,0,0,0.154816123316076,0,0,0,0.309868802321207,0.710846162437108,0,0.553995408531877,2.80762226458198,1.95309783644267,0.447830948479849,0,0,1.01778767145695,0.755751887377619,0.485168122375632,0.464858073811369,1.6446715520873,0.929119112685311,0.863077176966451,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,5.41705946377367,1.31769637679823,0.545812300115692,0,0.612167784741805,0.320929027076094,1.27867425159808,0,1.99463657621632,0.852449501065388,1.7412554317715,0,1.24564449799115,1.7587406567972,1.0429658368404,0.217188844705117,0,0.736555271975129,0.316462387440884,0.845021145247767,0.850417199860174,0.838634582033504,0.44931452458598,0.600707571366025,1.44653028027372,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0.954053754535364,1.1384259382189,1.17447437874188,1.91136614062614,0,0,0.263384084775077,1.37696839079683,2.75107533924415,2.46721798799411,0.83593247695339,0.651844533267181,0.946895611469467,0,0.557052284425868,0,0.443067789167242,2.43723477388514,0.768547918354051,0.650296737799391,1.64437904603676,0,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,0.339928028092699,0.766440987203842,0,2.02415753615602,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0.80642697289893,2.94184215361858,3.04131248153878,0,0,0.12786256184353,0,0,1.30361867064741,0,0,0.283604451492204,0.665188192387692,0.351339142772504,0.0654895377488563,0,0,0.324547393654683,0,0.26591592103773,0.476981248610684,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,3.87780264148325,0.436094052142534,0,1.01304409331664,0.397227542439656,0.573673241497627,1.06400514659507,0.560677600142307,0,0,0,0,0,0,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0,0.491337269247072,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0.340296549480063,0.538168907066586,0.640672166455702,0.211931901159562,0,0,0,0.18611685633159,0.675105328965065,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,0.365921118388786,0.132529768321485,0.929551542956147,0.414644220061482,0.504641701751257,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0.723033089650446,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,2.36315962672562,1.7658523976586,0.245976877086227,0.171567810298526,0.109750285408626,0,0.502644862058154,0.277765335475589,0,0,1.44331342025273,0.463721619900307,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.297262324577456,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0,0.492663237895943,0.352193736052904,0,0.144119953416961,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0.22001485746285,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0.289562613335158,0.410952645100767,0,0.448340575974109,0.985153801009636,3.88129634747131,3.9786341246722,0.508189248444927,1.30139853857622,0,0.167516265334349,0.637938751653163,1.49801404789436,5.9832291840805,0.414415513436035,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,1.99267679560631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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25512 | |||
|TSSclassifier=S | |||
|UniProt=Q5VTL8 | |||
|association_with_transcript=59bp_to_AY211915_5end | |||
|description=CAGE_peak_10_at_PRPF38B_5end | |||
|id=chr1:109242263..109242272,+ | |||
|ontology_enrichment_celltype=CL:0002032!6.74e-15!165;CL:0000837!6.74e-15!165;CL:0002087!1.86e-14!119;CL:0000037!2.47e-14!172;CL:0000566!2.47e-14!172;CL:0000738!1.31e-13!140;CL:0002031!2.48e-13!124;CL:0000988!3.66e-12!182;CL:0000860!9.42e-10!45;CL:0002057!1.08e-08!42;CL:0000763!4.35e-08!112;CL:0000049!4.35e-08!112;CL:0002194!1.17e-07!63;CL:0000576!1.17e-07!63;CL:0000040!1.17e-07!63;CL:0000559!1.17e-07!63;CL:0000542!1.33e-07!53;CL:0000051!1.33e-07!53;CL:0002009!1.70e-07!65;CL:0000766!1.98e-07!76;CL:0000838!3.21e-07!52;CL:0000839!3.63e-07!70;CL:0000557!8.11e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,7.63e-11,161;CL:0000837,7.63e-11,161;CL:0000037,8.96e-11,168;CL:0000988,1.03e-09,177;CL:0000738,1.99e-09,136;CL:0002087,7.11e-09,115;CL:0000542,1.15e-07,53;CL:0000051,1.15e-07,53;CL:0002031,1.65e-07,120;CL:0000838,6.60e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.43e-07!51;DOID:0060083!5.43e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p10@PRPF38B | |||
}} |
Revision as of 23:18, 11 September 2013
Short description: | p10@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_PRPF38B_5end |
Coexpression cluster: | NA |
Association with transcript: | 59bp_to_AY211915_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | Q5VTL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 7.63e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.63e-11 | 161 |
hematopoietic stem cell | 8.96e-11 | 168 |
hematopoietic cell | 1.03e-09 | 177 |
leukocyte | 1.99e-09 | 136 |
nongranular leukocyte | 7.11e-09 | 115 |
lymphocyte | 1.15e-07 | 53 |
common lymphoid progenitor | 1.15e-07 | 53 |
hematopoietic lineage restricted progenitor cell | 1.65e-07 | 120 |
lymphoid lineage restricted progenitor cell | 6.60e-07 | 52 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.