FFCP PHASE1:Hg19::chr1:153651156..153651171,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4881|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7943|TSSclassifier=S|UniProt=P16066|association_with_transcript=0bp_to_NM_000906,uc001fcs.3_5end|coexpression_cluster_id=C1838|description=CAGE_peak_2_at_NPR1_5end|id=chr1:153651156..153651171,+|ontology_enrichment_celltype=CL:0000136!8.22e-12!15|ontology_enrichment_celltype_v019=CL:0000136;2.75e-16;13|ontology_enrichment_celltype_v019_2=CL:0000136,4.02e-15,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.45e-37!115;UBERON:0000477!6.82e-15!286;UBERON:0000025!1.33e-13!194;UBERON:0004111!1.74e-13!241;UBERON:0001049!3.17e-11!57;UBERON:0005068!3.17e-11!57;UBERON:0006241!3.17e-11!57;UBERON:0007135!3.17e-11!57;UBERON:0000468!2.01e-10!659;UBERON:0000064!7.70e-10!219;UBERON:0002616!2.88e-09!59;UBERON:0003080!3.96e-09!42;UBERON:0002417!7.53e-09!61;UBERON:0000916!7.53e-09!61;UBERON:0002780!1.68e-08!41;UBERON:0001890!1.68e-08!41;UBERON:0006240!1.68e-08!41;UBERON:0001017!2.13e-08!82;UBERON:0003103!2.31e-08!69;UBERON:0003075!3.09e-08!86;UBERON:0007284!3.09e-08!86;UBERON:0000467!4.09e-08!625;UBERON:0000062!4.16e-08!511;UBERON:0000955!4.95e-08!69;UBERON:0006238!4.95e-08!69;UBERON:0000480!5.37e-08!626;UBERON:0005743!6.71e-08!86;UBERON:0002346!1.44e-07!90;UBERON:0000119!1.60e-07!312;UBERON:0000483!1.65e-07!309;UBERON:0000922!3.03e-07!612;UBERON:0001013!3.57e-07!14;UBERON:0000073!3.64e-07!94;UBERON:0001016!3.64e-07!94;UBERON:0002020!5.92e-07!34;UBERON:0003528!5.92e-07!34;UBERON:0001893!9.19e-07!34|ontology_enrichment_uberon_v019=UBERON:0007100;4.05e-08;25!UBERON:0003688;1.26e-07;6!UBERON:0002358;1.26e-07;6!UBERON:0003684;1.26e-07;6!UBERON:0001178;1.26e-07;6!UBERON:0001737;1.47e-07;9!UBERON:0001557;1.47e-07;9!UBERON:0007023;2.36e-07;114!UBERON:0001013;8.49e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.81e-27,114;UBERON:0003103,1.32e-10,68;UBERON:0002417,7.51e-09,60;UBERON:0000916,7.51e-09,60;UBERON:0007100,3.53e-08,27;UBERON:0003688,1.30e-07,6;UBERON:0002358,1.30e-07,6;UBERON:0003684,1.30e-07,6;UBERON:0001178,1.30e-07,6;UBERON:0001737,1.40e-07,9;UBERON:0004111,2.17e-07,240;UBERON:0001557,3.36e-07,19;UBERON:0009569,3.82e-07,112;UBERON:0003887,4.13e-07,12;UBERON:0004921,4.48e-07,118;UBERON:0004876,6.99e-07,11;UBERON:0000080,8.11e-07,9;UBERON:0002120,8.11e-07,9;UBERON:0004875,8.11e-07,9;UBERON:0005721,8.11e-07,9;UBERON:0005754,8.11e-07,9;UBERON:0007297,8.11e-07,9;UBERON:0001013,9.76e-07,14|phase1_expression=16.3510541343501,18.4126450546246,39.044369934584,17.0124607200322,35.3099264597557,13.0850778615055,17.7309914717817,4.42203911398782,32.38701789678,0.737201809504527,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.9426179682566,4.69490601792545,3.96373941714944,0,0,0,0,0,0,0,0,5.56661070865279,0,0,5.8418530857843,6.79105975467142,3.98873881556595,0,0,0,1.19257444420023,0,1.38856200643038,3.95715559346807,2.09749718104953,0,0.208994966536811,10.5950871259425,6.40379272836078,4.35136796594071,0.402829317109147,0,1.70843440283719,1.47065232138347,0,9.46577119811245,17.0642323195889,12.6124858141321,0,0,1.83201743930407,0,0,0,0.496971951695318,0.379891534993739,0.264818361626438,0.286836620748814,0,0,0,0,8.09148692039392,1.61652806483626,21.0865855016362,0.151357427644931,0,0,0,0,0.149448680551801,0.587172493218824,1.13311061057692,0.702254033511242,0,0,0,0,0,10.0117749813183,2.15585442544872,0,0,0,0,0,0,2.1552114800404,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,3.07597680103594,4.04603256187444,2.6511213287183,2.75734931830985,4.79334777003293,2.13543557199987,3.37078270400411,4.12065076763227,2.69323009862473,65.6958354615937,14.0241773803446,8.6430542379594,5.88034845542168,0,0,24.2223861739376,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.577465791044295,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,5.13217338068116,0,0,0,0.112131084345361,0,0.07333828582095,0,17.8828222925941,2.535908257668,2.39344304926383,2.08014873822732,0,0,0,2.85955987316295,1.08524321078289,0,0.977208552881205,1.77695974371273,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.783204629850962,0,0,0,0,0,0,0,1.98486246255021,0.61384789315225,0.561320188866147,20.6304030301679,4.60536524160033,2.2519548960105,13.3576259800492,0,0.177561725313127,0,0,0,0,0,0,0,0.364182336013434,0,0.451199612907412,0,0,0,0.105551628892876,14.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7943 | |||
|TSSclassifier=S | |||
|UniProt=P16066 | |||
|association_with_transcript=0bp_to_NM_000906,uc001fcs.3_5end | |||
|coexpression_cluster_id=C1838 | |||
|description=CAGE_peak_2_at_NPR1_5end | |||
|id=chr1:153651156..153651171,+ | |||
|ontology_enrichment_celltype=CL:0000136!8.22e-12!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.75e-16;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.02e-15,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-37!115;UBERON:0000477!6.82e-15!286;UBERON:0000025!1.33e-13!194;UBERON:0004111!1.74e-13!241;UBERON:0001049!3.17e-11!57;UBERON:0005068!3.17e-11!57;UBERON:0006241!3.17e-11!57;UBERON:0007135!3.17e-11!57;UBERON:0000468!2.01e-10!659;UBERON:0000064!7.70e-10!219;UBERON:0002616!2.88e-09!59;UBERON:0003080!3.96e-09!42;UBERON:0002417!7.53e-09!61;UBERON:0000916!7.53e-09!61;UBERON:0002780!1.68e-08!41;UBERON:0001890!1.68e-08!41;UBERON:0006240!1.68e-08!41;UBERON:0001017!2.13e-08!82;UBERON:0003103!2.31e-08!69;UBERON:0003075!3.09e-08!86;UBERON:0007284!3.09e-08!86;UBERON:0000467!4.09e-08!625;UBERON:0000062!4.16e-08!511;UBERON:0000955!4.95e-08!69;UBERON:0006238!4.95e-08!69;UBERON:0000480!5.37e-08!626;UBERON:0005743!6.71e-08!86;UBERON:0002346!1.44e-07!90;UBERON:0000119!1.60e-07!312;UBERON:0000483!1.65e-07!309;UBERON:0000922!3.03e-07!612;UBERON:0001013!3.57e-07!14;UBERON:0000073!3.64e-07!94;UBERON:0001016!3.64e-07!94;UBERON:0002020!5.92e-07!34;UBERON:0003528!5.92e-07!34;UBERON:0001893!9.19e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.05e-08;25!UBERON:0003688;1.26e-07;6!UBERON:0002358;1.26e-07;6!UBERON:0003684;1.26e-07;6!UBERON:0001178;1.26e-07;6!UBERON:0001737;1.47e-07;9!UBERON:0001557;1.47e-07;9!UBERON:0007023;2.36e-07;114!UBERON:0001013;8.49e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.81e-27,114;UBERON:0003103,1.32e-10,68;UBERON:0002417,7.51e-09,60;UBERON:0000916,7.51e-09,60;UBERON:0007100,3.53e-08,27;UBERON:0003688,1.30e-07,6;UBERON:0002358,1.30e-07,6;UBERON:0003684,1.30e-07,6;UBERON:0001178,1.30e-07,6;UBERON:0001737,1.40e-07,9;UBERON:0004111,2.17e-07,240;UBERON:0001557,3.36e-07,19;UBERON:0009569,3.82e-07,112;UBERON:0003887,4.13e-07,12;UBERON:0004921,4.48e-07,118;UBERON:0004876,6.99e-07,11;UBERON:0000080,8.11e-07,9;UBERON:0002120,8.11e-07,9;UBERON:0004875,8.11e-07,9;UBERON:0005721,8.11e-07,9;UBERON:0005754,8.11e-07,9;UBERON:0007297,8.11e-07,9;UBERON:0001013,9.76e-07,14 | |||
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| |||
|short_description=p2@NPR1 | |||
}} |
Revision as of 00:33, 12 September 2013
Short description: | p2@NPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NPR1_5end |
Coexpression cluster: | C1838_breast_aorta_extraskeletal_mature_Adipocyte_lung_Hepatic |
Association with transcript: | 0bp_to_NM_000906, uc001fcs.3_5end |
EntrezGene: | NPR1 |
HGNC: | 7943 |
UniProt: | P16066 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.02e-15 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.81e-27 | 114 |
compound organ | 1.32e-10 | 68 |
abdominal segment of trunk | 7.51e-09 | 60 |
abdomen | 7.51e-09 | 60 |
primary circulatory organ | 3.53e-08 | 27 |
omentum | 1.30e-07 | 6 |
peritoneum | 1.30e-07 | 6 |
abdominal cavity | 1.30e-07 | 6 |
visceral peritoneum | 1.30e-07 | 6 |
larynx | 1.40e-07 | 9 |
anatomical conduit | 2.17e-07 | 240 |
upper respiratory tract | 3.36e-07 | 19 |
subdivision of trunk | 3.82e-07 | 112 |
intraembryonic coelom | 4.13e-07 | 12 |
subdivision of digestive tract | 4.48e-07 | 118 |
urogenital ridge | 6.99e-07 | 11 |
mesonephros | 8.11e-07 | 9 |
pronephros | 8.11e-07 | 9 |
nephrogenic cord | 8.11e-07 | 9 |
pronephric mesoderm | 8.11e-07 | 9 |
rostral part of nephrogenic cord | 8.11e-07 | 9 |
presumptive pronephric mesoderm | 8.11e-07 | 9 |
adipose tissue | 9.76e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.