FFCP PHASE1:Hg19::chr1:170632325..170632339,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5396|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9142|TSSclassifier=S|UniProt=P54821|association_with_transcript=50bp_to_ENST00000367760_5end|coexpression_cluster_id=C929|description=CAGE_peak_24_at_PRRX1_5end|id=chr1:170632325..170632339,+|ontology_enrichment_celltype=CL:0000057!5.00e-22!75;CL:0000055!2.77e-18!180;CL:0002620!7.95e-13!23;CL:0002556!2.42e-07!6|ontology_enrichment_celltype_v019=CL:0002556;1.23e-12;6!CL:0002552;6.43e-11;5!CL:0002334;1.84e-08;12!CL:0000197;6.75e-08;6!CL:0000098;6.75e-08;6!CL:0002167;6.75e-08;6!CL:0000057;2.65e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,5.11e-17,76;CL:0002556,3.96e-13,6;CL:0002552,7.40e-11,5;CL:0002334,2.24e-08,12;CL:0000197,5.67e-08,6;CL:0000098,5.67e-08,6;CL:0002167,5.67e-08,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.09e-13!95;UBERON:0002199!8.82e-11!45;UBERON:0002416!8.82e-11!45;UBERON:0000475!6.59e-10!365;UBERON:0002097!1.11e-09!40;UBERON:0007023!8.61e-08!115;UBERON:0000914!1.28e-07!83;UBERON:0002329!1.28e-07!83;UBERON:0003077!1.28e-07!83;UBERON:0003059!1.28e-07!83;UBERON:0007282!1.28e-07!83;UBERON:0009618!1.28e-07!83;UBERON:0007285!1.28e-07!83;UBERON:0001758!2.42e-07!6;UBERON:0003672!2.42e-07!6|ontology_enrichment_uberon_v019=UBERON:0001758;1.23e-12;6!UBERON:0003672;1.23e-12;6!UBERON:0000165;4.16e-11;28!UBERON:0003129;8.88e-11;7!UBERON:0011137;1.22e-09;11!UBERON:0010323;1.22e-09;11!UBERON:0001828;8.66e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000165,3.63e-13,29;UBERON:0000930,3.63e-13,29;UBERON:0001758,3.96e-13,6;UBERON:0003672,3.96e-13,6;UBERON:0003102,1.04e-12,99;UBERON:0003129,3.40e-11,7;UBERON:0010323,5.95e-10,11;UBERON:0001444,7.82e-08,49;UBERON:0011137,1.20e-07,14;UBERON:0001828,9.42e-07,8|phase1_expression=1.63510541343501,0.642301571672949,0.422863212287913,0,0,0.872338524100369,0,0,1.56711376919903,0,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0,0.684372125364421,0.125542639594803,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.724232594804119,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0.926864265692532,0.573673241497627,1.77334191099179,0.560677600142307,0,0.24666754841716,0.933633106199299,0,0.163461903113459,0,0,0,1.24864030732128,0,0.747243402759005,0.939475989150119,0.485618833104395,0.702254033511242,2.04154171254893,0.859840221182376,2.06651562351531,9.50402285825643,3.21447008062124,0,0,2.02003336744879,1.87677779807946,1.6623846929051,0.877955241761676,1.83892677479412,4.8076178850111,0,0.358779271377724,1.92201649936711,0.423863802319124,0.300091096084402,0.206105058476878,0.772921620136887,0.930584281657949,2.86919764810153,1.26668106709558,0.252433774244115,0.184099797284599,1.77810662500693,0.355009592516614,0.201504196455281,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0.845302752556,0.26593811658487,0,0,0,0.799266537048298,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,1.14861935834114,1.42636905040718,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0.500170521059677,0,1.66376689224646,1.07057393278297,1.26161932027148,1.99140405487612,0.300946099727719,0,0,0.664225598535437,0.184369168541703,2.08520674723399,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,2.91577749247319,1.12264037773229,0,1.02341449813341,0,0,0.925258162815933,1.9531789784444,2.38168752440047,0,1.27831416305955,0,0,0,0.114814448164607,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.193341436584244,0,0.460511024178389,0.413509717453592,0.429680979473094,0.290033387828457,0.426133137080504,0.445160178233687,0,0,0,0,0.464845549297286,0,0,0.616067160352178,0,0,0.37064843820784,0,0.372158369359667,0,0,0,0,1.27281299170375,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,2.53329162357197,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.19548792950642,0.276283915531148,0,0,0.369254416383208,0.311039587661807,0,0,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |||
|TSSclassifier=S | |||
|UniProt=P54821 | |||
|association_with_transcript=50bp_to_ENST00000367760_5end | |||
|coexpression_cluster_id=C929 | |||
|description=CAGE_peak_24_at_PRRX1_5end | |||
|id=chr1:170632325..170632339,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.00e-22!75;CL:0000055!2.77e-18!180;CL:0002620!7.95e-13!23;CL:0002556!2.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002556;1.23e-12;6!CL:0002552;6.43e-11;5!CL:0002334;1.84e-08;12!CL:0000197;6.75e-08;6!CL:0000098;6.75e-08;6!CL:0002167;6.75e-08;6!CL:0000057;2.65e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.11e-17,76;CL:0002556,3.96e-13,6;CL:0002552,7.40e-11,5;CL:0002334,2.24e-08,12;CL:0000197,5.67e-08,6;CL:0000098,5.67e-08,6;CL:0002167,5.67e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.09e-13!95;UBERON:0002199!8.82e-11!45;UBERON:0002416!8.82e-11!45;UBERON:0000475!6.59e-10!365;UBERON:0002097!1.11e-09!40;UBERON:0007023!8.61e-08!115;UBERON:0000914!1.28e-07!83;UBERON:0002329!1.28e-07!83;UBERON:0003077!1.28e-07!83;UBERON:0003059!1.28e-07!83;UBERON:0007282!1.28e-07!83;UBERON:0009618!1.28e-07!83;UBERON:0007285!1.28e-07!83;UBERON:0001758!2.42e-07!6;UBERON:0003672!2.42e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;1.23e-12;6!UBERON:0003672;1.23e-12;6!UBERON:0000165;4.16e-11;28!UBERON:0003129;8.88e-11;7!UBERON:0011137;1.22e-09;11!UBERON:0010323;1.22e-09;11!UBERON:0001828;8.66e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,3.63e-13,29;UBERON:0000930,3.63e-13,29;UBERON:0001758,3.96e-13,6;UBERON:0003672,3.96e-13,6;UBERON:0003102,1.04e-12,99;UBERON:0003129,3.40e-11,7;UBERON:0010323,5.95e-10,11;UBERON:0001444,7.82e-08,49;UBERON:0011137,1.20e-07,14;UBERON:0001828,9.42e-07,8 | |||
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| |||
|short_description=p24@PRRX1 | |||
}} |
Revision as of 01:41, 12 September 2013
Short description: | p24@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 50bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.11e-17 | 76 |
fibroblast of periodontium | 3.96e-13 | 6 |
fibroblast of gingiva | 7.40e-11 | 5 |
preadipocyte | 2.24e-08 | 12 |
receptor cell | 5.67e-08 | 6 |
sensory epithelial cell | 5.67e-08 | 6 |
olfactory epithelial cell | 5.67e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mouth | 3.63e-13 | 29 |
stomodeum | 3.63e-13 | 29 |
periodontium | 3.96e-13 | 6 |
dentition | 3.96e-13 | 6 |
surface structure | 1.04e-12 | 99 |
skull | 3.40e-11 | 7 |
cranial skeletal system | 5.95e-10 | 11 |
subdivision of head | 7.82e-08 | 49 |
axial skeletal system | 1.20e-07 | 14 |
gingiva | 9.42e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.