FFCP PHASE1:Hg19::chr1:176524663..176524674,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=60676|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=14615|TSSclassifier=S|UniProt=A9Z1Y8|association_with_transcript=-11bp_to_BC117195_5end|coexpression_cluster_id=C50|description=CAGE_peak_8_at_PAPPA2_5end|id=chr1:176524663..176524674,+|ontology_enrichment_celltype=CL:0002541!4.61e-18!3|ontology_enrichment_celltype_v019=CL:0002541;1.28e-53;3!CL:0000349;1.99e-09;19|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-53,3;CL:0000349,1.99e-09,19|ontology_enrichment_development_v019=UBERON:0003124;1.48e-40;1!UBERON:0004872;5.70e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!4.61e-18!3;UBERON:0000920!4.61e-18!3;UBERON:0003124!1.33e-13!7;UBERON:0005631!2.81e-10!14;UBERON:0000158!2.81e-10!14;UBERON:0002426!2.99e-07!1;UBERON:0003831!2.99e-07!1;UBERON:0003898!2.99e-07!1;UBERON:0004830!2.99e-07!1;UBERON:0001774!2.99e-07!1;UBERON:0003830!2.99e-07!1;UBERON:0005175!2.99e-07!1;UBERON:0003897!2.99e-07!1;UBERON:0001103!2.99e-07!1;UBERON:0010084!2.99e-07!1;UBERON:0001301!6.76e-07!1|ontology_enrichment_uberon_v019=UBERON:0003124;1.28e-53;3!UBERON:0000920;1.28e-53;3!UBERON:0005631;5.90e-17;10!UBERON:0000158;5.90e-17;10!UBERON:0000478;1.02e-15;24!UBERON:0001987;3.10e-11;4|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.28e-53,3;UBERON:0003124,1.93e-51,7;UBERON:0005631,2.90e-26,14;UBERON:0000158,2.90e-26,14;UBERON:0000478,1.02e-15,24;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.41215701165169,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74202087517455,0.0915975934018623,12.7928346244472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,3.193285325855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@PAPPA2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=60676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14615 | |||
|TSSclassifier=S | |||
|UniProt=A9Z1Y8 | |||
|association_with_transcript=-11bp_to_BC117195_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_8_at_PAPPA2_5end | |||
|id=chr1:176524663..176524674,+ | |||
|ontology_enrichment_celltype=CL:0002541!4.61e-18!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.28e-53;3!CL:0000349;1.99e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.28e-53,3;CL:0000349,1.99e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.48e-40;1!UBERON:0004872;5.70e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!4.61e-18!3;UBERON:0000920!4.61e-18!3;UBERON:0003124!1.33e-13!7;UBERON:0005631!2.81e-10!14;UBERON:0000158!2.81e-10!14;UBERON:0002426!2.99e-07!1;UBERON:0003831!2.99e-07!1;UBERON:0003898!2.99e-07!1;UBERON:0004830!2.99e-07!1;UBERON:0001774!2.99e-07!1;UBERON:0003830!2.99e-07!1;UBERON:0005175!2.99e-07!1;UBERON:0003897!2.99e-07!1;UBERON:0001103!2.99e-07!1;UBERON:0010084!2.99e-07!1;UBERON:0001301!6.76e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.28e-53;3!UBERON:0000920;1.28e-53;3!UBERON:0005631;5.90e-17;10!UBERON:0000158;5.90e-17;10!UBERON:0000478;1.02e-15;24!UBERON:0001987;3.10e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.28e-53,3;UBERON:0003124,1.93e-51,7;UBERON:0005631,2.90e-26,14;UBERON:0000158,2.90e-26,14;UBERON:0000478,1.02e-15,24;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.41215701165169,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74202087517455,0.0915975934018623,12.7928346244472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,3.193285325855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PAPPA2 | |||
}} |
Revision as of 01:57, 12 September 2013
Short description: | p8@PAPPA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PAPPA2_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -11bp_to_BC117195_5end |
EntrezGene: | PAPPA2 |
HGNC: | 14615 |
UniProt: | A9Z1Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.28e-53 | 3 |
extraembryonic cell | 1.99e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.28e-53 | 3 |
chorion | 1.93e-51 | 7 |
extraembryonic membrane | 2.90e-26 | 14 |
membranous layer | 2.90e-26 | 14 |
extraembryonic structure | 1.02e-15 | 24 |
placenta | 3.10e-11 | 4 |
allantois | 3.10e-11 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.