FFCP PHASE1:Hg19::chr1:180601188..180601207,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12827|TSSclassifier=S|UniProt=|association_with_transcript=20bp_to_ENST00000367589_5end|coexpression_cluster_id=C255|description=CAGE_peak_2_at_XPR1_5end|id=chr1:180601188..180601207,+|ontology_enrichment_celltype=CL:0002057!2.84e-12!42;CL:0000860!1.21e-11!45;CL:0000766!1.12e-10!76;CL:0000557!1.78e-08!71;CL:0000839!7.32e-08!70;CL:0000738!1.94e-07!140;CL:0002009!4.89e-07!65|ontology_enrichment_celltype_v019=CL:0000860;4.02e-08;33!CL:0002057;4.02e-08;33!CL:0000094;1.63e-07;8|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-13,42;CL:0002057,1.48e-13,42;CL:0000766,4.29e-13,72;CL:0000473,3.48e-12,48;CL:0000234,3.48e-12,48;CL:0000557,3.90e-10,67;CL:0000839,2.57e-09,66;CL:0000738,2.81e-09,136;CL:0002009,2.61e-08,61;CL:0000763,4.26e-08,108;CL:0000049,4.26e-08,108;CL:0000094,1.70e-07,8;CL:0002194,2.30e-07,59;CL:0000576,2.30e-07,59;CL:0000040,2.30e-07,59;CL:0000559,2.30e-07,59;CL:0002031,3.43e-07,120|ontology_enrichment_development_v019=CL:0002057;2.29e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004765!2.14e-08!101;UBERON:0001434!2.14e-08!101;UBERON:0001474!1.29e-07!86;UBERON:0002371!9.54e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.91e-10,82;UBERON:0004765,1.11e-08,90;UBERON:0002371,2.81e-08,76;UBERON:0001434,3.41e-08,100|phase1_expression=1.63510541343501,1.49870366723688,0.845726424575827,2.00146596706261,0.893922188854576,0.872338524100369,0,0.631719873426831,1.04474251279935,0.491467873003018,1.39560233594486,0.218441372130172,0,0.495065411840187,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0.487932798790507,0.246242116153576,0,0.626909442956176,4.57977579409691,1.23186982565596,0.376627918784408,0.458480434487708,0.738905305049512,0.708397031823113,3.14691421479123,2.68680578668049,4.18003532953405,0,0.6024118375565,1.10926203050036,1.31694240986513,0.426507697462265,0,3.32397245119126,1.40381113229099,4.12320654360118,0,0,0,1.74477886535478,0.755751887377619,2.18325655069035,1.85943229524548,0.822335776043652,3.71647645074124,2.01384674625505,2.30544635876191,2.83778675866302,2.75796544589295,3.22742341791913,8.12558919566051,1.31769637679823,1.36453075028923,2.69668181334102,1.53041946185451,2.24650318953266,1.91801137739712,1.64925650093358,2.79249120670285,2.98357325372886,2.61188314765726,0.56738522469114,1.86846674698672,1.7587406567972,1.0429658368404,3.04064382587163,3.02699751316684,1.84138817993782,4.1140110367315,1.90129757680748,1.70083439972035,1.46761051855863,0.561643155732475,0.901061357049038,0.48217676009124,2.56511469367124,3.77941686678271,1.46131323011707,3.51992488922645,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,0.587237189370939,2.6759125968766,0,5.60508562981536,0.526768169550154,7.67168103443949,5.10913991573914,4.93443597598822,0.167186495390678,1.95553359980154,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,1.08321545506006,0.640456598628376,0.650296737799391,0.164437904603676,0.552700035571697,0,1.63115219478266,1.60524496853828,1.04535523804977,0.453237370790265,1.53288197440768,1.37450978193052,1.51811815211702,0,0.651083453856419,0,0.301150238155546,0.127986611154418,0,0,0,8.26587647221403,8.02320587350522,6.66192257860875,0,0,0.511450247374121,1.44575660953827,1.00267582127178,0.289693037921647,1.5905718941022,0.486634870302636,0.472674085820339,0.221729397462564,0.263504357079378,2.61958150995425,0,0,0.324547393654683,0.174129737299267,0,0.476981248610684,0.571994910780128,1.11437250398869,0.198762407366705,0,0.694281003215189,1.13061588384802,0.419499436209906,1.10047216776027,1.04497483268405,0.258416759169329,1.06729878806013,0.33472061276467,1.20848795132744,2.28081631715554,0.976248230192678,0.735326160691737,0.81014194788176,0.625098097988558,0,0.225222960966644,0,0.949265659568129,0.549605231791222,5.27121669744253,11.6334079244498,0.872188104285069,0,1.13967460498122,1.32409180813219,1.43418310374407,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0.538842688278752,0.163461903113459,0,0,0,0.624320153660641,1.1409436430889,0,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,0.741800787835671,0,0.718618141816238,0.673344455816265,0.500474079487857,1.6623846929051,0.438977620880838,0.612975591598039,0.901428353439581,0.226864366320042,0.717558542755448,0.640672166455702,0,1.50045548042201,0.309157587715317,0.257640540045629,0.558350568994769,2.02531598689519,0.779496041289589,0,0.184099797284599,0.323292113637624,0.355009592516614,0.604512589365842,0,1.54608682530637,1.36373060295417,1.14721838155602,0.731842236777572,0.530119073285941,0.348581828608555,1.24393266018445,1.00928340350251,1.09493207722749,0,0,0,0,0,1.8929088006375,2.02301628093722,3.3741544183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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12827 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000367589_5end | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_2_at_XPR1_5end | |||
|id=chr1:180601188..180601207,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.84e-12!42;CL:0000860!1.21e-11!45;CL:0000766!1.12e-10!76;CL:0000557!1.78e-08!71;CL:0000839!7.32e-08!70;CL:0000738!1.94e-07!140;CL:0002009!4.89e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.02e-08;33!CL:0002057;4.02e-08;33!CL:0000094;1.63e-07;8 | |||
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|ontology_enrichment_development_v019=CL:0002057;2.29e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!2.14e-08!101;UBERON:0001434!2.14e-08!101;UBERON:0001474!1.29e-07!86;UBERON:0002371!9.54e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,9.91e-10,82;UBERON:0004765,1.11e-08,90;UBERON:0002371,2.81e-08,76;UBERON:0001434,3.41e-08,100 | |||
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| |||
|short_description=p2@XPR1 | |||
}} |
Revision as of 02:04, 12 September 2013
Short description: | p2@XPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_XPR1_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 20bp_to_ENST00000367589_5end |
EntrezGene: | XPR1 |
HGNC: | 12827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.48e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-13 | 42 |
myeloid leukocyte | 4.29e-13 | 72 |
defensive cell | 3.48e-12 | 48 |
phagocyte | 3.48e-12 | 48 |
granulocyte monocyte progenitor cell | 3.90e-10 | 67 |
myeloid lineage restricted progenitor cell | 2.57e-09 | 66 |
leukocyte | 2.81e-09 | 136 |
macrophage dendritic cell progenitor | 2.61e-08 | 61 |
myeloid cell | 4.26e-08 | 108 |
common myeloid progenitor | 4.26e-08 | 108 |
granulocyte | 1.70e-07 | 8 |
monopoietic cell | 2.30e-07 | 59 |
monocyte | 2.30e-07 | 59 |
monoblast | 2.30e-07 | 59 |
promonocyte | 2.30e-07 | 59 |
hematopoietic lineage restricted progenitor cell | 3.43e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone element | 9.91e-10 | 82 |
skeletal element | 1.11e-08 | 90 |
bone marrow | 2.81e-08 | 76 |
skeletal system | 3.41e-08 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.