FFCP PHASE1:Hg19::chr1:230846192..230846210,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=183|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=333|TSSclassifier=N|UniProt=Q86U78|association_with_transcript=385bp_to_AB529142,BT006851,DQ891016,DQ894196_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_AGT_5end|id=chr1:230846192..230846210,-|ontology_enrichment_celltype=CL:0000181!1.28e-10!12;CL:0000417!1.28e-10!12;CL:0000668!1.28e-10!12;CL:0000414!1.28e-10!12;CL:0000412!1.28e-10!12;CL:0000182!1.28e-10!12|ontology_enrichment_celltype_v019=CL:0000182;2.53e-17;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-17,12|ontology_enrichment_development_v019=UBERON:0004161;4.52e-09;11!UBERON:0009497;8.17e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.07e-42!115;UBERON:0001049!4.73e-33!57;UBERON:0005068!4.73e-33!57;UBERON:0006241!4.73e-33!57;UBERON:0007135!4.73e-33!57;UBERON:0001017!3.87e-27!82;UBERON:0005743!1.83e-25!86;UBERON:0002616!1.13e-24!59;UBERON:0003075!4.79e-24!86;UBERON:0007284!4.79e-24!86;UBERON:0000955!2.24e-23!69;UBERON:0006238!2.24e-23!69;UBERON:0002780!6.50e-23!41;UBERON:0001890!6.50e-23!41;UBERON:0006240!6.50e-23!41;UBERON:0002346!1.40e-22!90;UBERON:0003080!3.07e-22!42;UBERON:0000073!3.28e-22!94;UBERON:0001016!3.28e-22!94;UBERON:0002020!1.59e-20!34;UBERON:0003528!1.59e-20!34;UBERON:0001893!1.78e-20!34;UBERON:0002791!5.41e-19!33;UBERON:0001869!4.30e-17!32;UBERON:0000025!5.72e-15!194;UBERON:0003056!1.25e-13!61;UBERON:0002619!6.60e-13!22;UBERON:0004111!7.55e-13!241;UBERON:0002308!1.62e-12!9;UBERON:0000125!1.62e-12!9;UBERON:0003076!4.72e-12!15;UBERON:0003057!4.72e-12!15;UBERON:0001950!5.99e-12!20;UBERON:0000033!8.40e-12!123;UBERON:0000483!3.03e-11!309;UBERON:0000956!4.20e-11!25;UBERON:0000203!4.20e-11!25;UBERON:0004121!4.56e-11!169;UBERON:0000119!5.19e-11!312;UBERON:0000153!6.72e-11!129;UBERON:0007811!6.72e-11!129;UBERON:0000924!1.32e-10!173;UBERON:0006601!1.32e-10!173;UBERON:0002107!1.70e-10!19;UBERON:0006925!1.70e-10!19;UBERON:0008836!1.70e-10!19;UBERON:0000477!2.99e-10!286;UBERON:0000475!1.04e-09!365;UBERON:0002420!1.23e-09!9;UBERON:0007245!1.23e-09!9;UBERON:0010009!1.23e-09!9;UBERON:0010011!1.23e-09!9;UBERON:0000454!1.23e-09!9;UBERON:0009497!2.92e-09!25;UBERON:0000015!2.92e-09!25;UBERON:0002423!2.92e-09!25;UBERON:0006235!2.92e-09!25;UBERON:0004161!2.92e-09!25;UBERON:0002240!4.00e-09!3;UBERON:0004151!4.70e-09!3;UBERON:0008835!8.47e-09!22;UBERON:0003894!8.47e-09!22;UBERON:0009663!1.15e-08!7;UBERON:0005057!1.20e-08!26;UBERON:0009854!2.48e-08!23;UBERON:0006331!2.89e-08!3;UBERON:0000062!3.30e-08!511;UBERON:0001872!3.92e-08!5;UBERON:0002298!1.62e-07!8;UBERON:0007499!1.63e-07!25;UBERON:0009856!3.73e-07!26|ontology_enrichment_uberon_v019=UBERON:0002107;2.54e-29;19!UBERON:0006925;2.54e-29;19!UBERON:0002423;2.28e-22;25!UBERON:0002365;4.76e-18;31!UBERON:0002330;4.76e-18;31!UBERON:0002368;1.28e-15;33!UBERON:0000949;2.28e-11;43!UBERON:0005172;3.03e-08;52!UBERON:0005173;3.03e-08;52|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.54e-29,19;UBERON:0006925,2.54e-29,19;UBERON:0008836,2.54e-29,19;UBERON:0008835,2.26e-25,22;UBERON:0003894,2.26e-25,22;UBERON:0009854,2.76e-24,23;UBERON:0007499,2.28e-22,25;UBERON:0009497,2.28e-22,25;UBERON:0000015,2.28e-22,25;UBERON:0002423,2.28e-22,25;UBERON:0006235,2.28e-22,25;UBERON:0004161,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0002365,4.26e-18,31;UBERON:0002330,4.26e-18,31;UBERON:0002368,4.66e-16,35;UBERON:0000949,1.54e-12,45;UBERON:0003929,1.77e-10,54;UBERON:0005172,1.77e-10,54;UBERON:0005173,1.77e-10,54;UBERON:0002530,1.33e-09,59;UBERON:0002417,1.92e-09,60;UBERON:0000916,1.92e-09,60;UBERON:0005911,6.18e-07,82|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,9.82827216677626,17.7236972004421,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=183 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=333 | |||
|TSSclassifier=N | |||
|UniProt=Q86U78 | |||
|association_with_transcript=385bp_to_AB529142,BT006851,DQ891016,DQ894196_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_AGT_5end | |||
|id=chr1:230846192..230846210,- | |||
|ontology_enrichment_celltype=CL:0000181!1.28e-10!12;CL:0000417!1.28e-10!12;CL:0000668!1.28e-10!12;CL:0000414!1.28e-10!12;CL:0000412!1.28e-10!12;CL:0000182!1.28e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.53e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.52e-09;11!UBERON:0009497;8.17e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.07e-42!115;UBERON:0001049!4.73e-33!57;UBERON:0005068!4.73e-33!57;UBERON:0006241!4.73e-33!57;UBERON:0007135!4.73e-33!57;UBERON:0001017!3.87e-27!82;UBERON:0005743!1.83e-25!86;UBERON:0002616!1.13e-24!59;UBERON:0003075!4.79e-24!86;UBERON:0007284!4.79e-24!86;UBERON:0000955!2.24e-23!69;UBERON:0006238!2.24e-23!69;UBERON:0002780!6.50e-23!41;UBERON:0001890!6.50e-23!41;UBERON:0006240!6.50e-23!41;UBERON:0002346!1.40e-22!90;UBERON:0003080!3.07e-22!42;UBERON:0000073!3.28e-22!94;UBERON:0001016!3.28e-22!94;UBERON:0002020!1.59e-20!34;UBERON:0003528!1.59e-20!34;UBERON:0001893!1.78e-20!34;UBERON:0002791!5.41e-19!33;UBERON:0001869!4.30e-17!32;UBERON:0000025!5.72e-15!194;UBERON:0003056!1.25e-13!61;UBERON:0002619!6.60e-13!22;UBERON:0004111!7.55e-13!241;UBERON:0002308!1.62e-12!9;UBERON:0000125!1.62e-12!9;UBERON:0003076!4.72e-12!15;UBERON:0003057!4.72e-12!15;UBERON:0001950!5.99e-12!20;UBERON:0000033!8.40e-12!123;UBERON:0000483!3.03e-11!309;UBERON:0000956!4.20e-11!25;UBERON:0000203!4.20e-11!25;UBERON:0004121!4.56e-11!169;UBERON:0000119!5.19e-11!312;UBERON:0000153!6.72e-11!129;UBERON:0007811!6.72e-11!129;UBERON:0000924!1.32e-10!173;UBERON:0006601!1.32e-10!173;UBERON:0002107!1.70e-10!19;UBERON:0006925!1.70e-10!19;UBERON:0008836!1.70e-10!19;UBERON:0000477!2.99e-10!286;UBERON:0000475!1.04e-09!365;UBERON:0002420!1.23e-09!9;UBERON:0007245!1.23e-09!9;UBERON:0010009!1.23e-09!9;UBERON:0010011!1.23e-09!9;UBERON:0000454!1.23e-09!9;UBERON:0009497!2.92e-09!25;UBERON:0000015!2.92e-09!25;UBERON:0002423!2.92e-09!25;UBERON:0006235!2.92e-09!25;UBERON:0004161!2.92e-09!25;UBERON:0002240!4.00e-09!3;UBERON:0004151!4.70e-09!3;UBERON:0008835!8.47e-09!22;UBERON:0003894!8.47e-09!22;UBERON:0009663!1.15e-08!7;UBERON:0005057!1.20e-08!26;UBERON:0009854!2.48e-08!23;UBERON:0006331!2.89e-08!3;UBERON:0000062!3.30e-08!511;UBERON:0001872!3.92e-08!5;UBERON:0002298!1.62e-07!8;UBERON:0007499!1.63e-07!25;UBERON:0009856!3.73e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.54e-29;19!UBERON:0006925;2.54e-29;19!UBERON:0002423;2.28e-22;25!UBERON:0002365;4.76e-18;31!UBERON:0002330;4.76e-18;31!UBERON:0002368;1.28e-15;33!UBERON:0000949;2.28e-11;43!UBERON:0005172;3.03e-08;52!UBERON:0005173;3.03e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.54e-29,19;UBERON:0006925,2.54e-29,19;UBERON:0008836,2.54e-29,19;UBERON:0008835,2.26e-25,22;UBERON:0003894,2.26e-25,22;UBERON:0009854,2.76e-24,23;UBERON:0007499,2.28e-22,25;UBERON:0009497,2.28e-22,25;UBERON:0000015,2.28e-22,25;UBERON:0002423,2.28e-22,25;UBERON:0006235,2.28e-22,25;UBERON:0004161,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0002365,4.26e-18,31;UBERON:0002330,4.26e-18,31;UBERON:0002368,4.66e-16,35;UBERON:0000949,1.54e-12,45;UBERON:0003929,1.77e-10,54;UBERON:0005172,1.77e-10,54;UBERON:0005173,1.77e-10,54;UBERON:0002530,1.33e-09,59;UBERON:0002417,1.92e-09,60;UBERON:0000916,1.92e-09,60;UBERON:0005911,6.18e-07,82 | |||
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|short_description=p3@AGT | |||
}} |
Revision as of 04:11, 12 September 2013
Short description: | p3@AGT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AGT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 385bp_to_AB529142, BT006851, DQ891016, DQ894196_5end |
EntrezGene: | AGT |
HGNC: | 333 |
UniProt: | Q86U78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.54e-29 | 19 |
digestive gland | 2.54e-29 | 19 |
liver bud | 2.54e-29 | 19 |
hepatic diverticulum | 2.26e-25 | 22 |
liver primordium | 2.26e-25 | 22 |
digestive tract diverticulum | 2.76e-24 | 23 |
epithelial sac | 2.28e-22 | 25 |
epithelium of foregut-midgut junction | 2.28e-22 | 25 |
anatomical boundary | 2.28e-22 | 25 |
hepatobiliary system | 2.28e-22 | 25 |
foregut-midgut junction | 2.28e-22 | 25 |
septum transversum | 2.28e-22 | 25 |
sac | 1.61e-21 | 26 |
exocrine gland | 4.26e-18 | 31 |
exocrine system | 4.26e-18 | 31 |
endocrine gland | 4.66e-16 | 35 |
endocrine system | 1.54e-12 | 45 |
gut epithelium | 1.77e-10 | 54 |
abdomen element | 1.77e-10 | 54 |
abdominal segment element | 1.77e-10 | 54 |
gland | 1.33e-09 | 59 |
abdominal segment of trunk | 1.92e-09 | 60 |
abdomen | 1.92e-09 | 60 |
endo-epithelium | 6.18e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.