FFCP PHASE1:Hg19::chr1:244214611..244214624,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10472|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13030|TSSclassifier=S|UniProt=Q99592|association_with_transcript=26bp_to_ENST00000358704_5end|coexpression_cluster_id=C2575|description=CAGE_peak_4_at_ZNF238_5end|id=chr1:244214611..244214624,+|ontology_enrichment_celltype=CL:0002319!1.13e-08!25|ontology_enrichment_celltype_v019=CL:0000784;2.49e-12;3!CL:0002319;2.44e-11;25!CL:0000047;4.42e-08;2|ontology_enrichment_celltype_v019_2=CL:0000784,2.50e-12,3;CL:0000047,1.42e-11,8;CL:0002319,2.09e-11,25|ontology_enrichment_development_v019=UBERON:0006215;2.59e-12;3!UBERON:0006601;2.36e-08;82!UBERON:0006238;8.25e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!9.11e-42!86;UBERON:0001017!3.12e-41!82;UBERON:0000073!3.45e-41!94;UBERON:0001016!3.45e-41!94;UBERON:0000955!4.02e-35!69;UBERON:0006238!4.02e-35!69;UBERON:0001049!7.18e-35!57;UBERON:0005068!7.18e-35!57;UBERON:0006241!7.18e-35!57;UBERON:0007135!7.18e-35!57;UBERON:0003075!1.96e-33!86;UBERON:0007284!1.96e-33!86;UBERON:0002616!2.50e-33!59;UBERON:0002346!1.43e-32!90;UBERON:0000956!2.55e-28!25;UBERON:0000203!2.55e-28!25;UBERON:0002619!1.47e-27!22;UBERON:0001893!4.08e-25!34;UBERON:0001869!4.47e-25!32;UBERON:0004121!7.50e-25!169;UBERON:0001950!8.40e-25!20;UBERON:0000924!1.07e-24!173;UBERON:0006601!1.07e-24!173;UBERON:0002020!1.57e-24!34;UBERON:0003528!1.57e-24!34;UBERON:0002780!1.71e-24!41;UBERON:0001890!1.71e-24!41;UBERON:0006240!1.71e-24!41;UBERON:0000153!2.16e-24!129;UBERON:0007811!2.16e-24!129;UBERON:0003056!4.73e-24!61;UBERON:0002791!8.47e-24!33;UBERON:0003080!1.08e-23!42;UBERON:0000033!6.22e-23!123;UBERON:0007023!1.59e-15!115;UBERON:0004733!6.52e-14!12;UBERON:0002028!6.52e-14!12;UBERON:0007277!6.52e-14!12;UBERON:0002680!4.45e-13!9;UBERON:0001895!4.45e-13!9;UBERON:0010092!4.45e-13!9;UBERON:0004732!1.31e-12!13;UBERON:0003076!2.40e-12!15;UBERON:0003057!2.40e-12!15;UBERON:0002037!4.42e-10!6;UBERON:0006215!4.42e-10!6;UBERON:0000200!7.72e-10!6;UBERON:0001871!9.95e-10!7;UBERON:0001872!1.47e-08!5;UBERON:0000349!1.59e-08!5|ontology_enrichment_uberon_v019=UBERON:0002619;1.78e-40;22!UBERON:0000956;2.66e-35;25!UBERON:0000203;2.66e-35;25!UBERON:0001950;1.10e-34;20!UBERON:0001869;9.61e-31;32!UBERON:0001893;1.70e-27;34!UBERON:0002791;3.70e-27;32!UBERON:0003528;3.86e-25;34!UBERON:0002020;3.86e-25;34!UBERON:0000073;5.23e-23;53!UBERON:0002616;5.23e-23;53!UBERON:0000955;1.88e-20;68!UBERON:0002780;5.04e-20;41!UBERON:0001890;5.04e-20;41!UBERON:0001017;4.00e-19;75!UBERON:0001016;6.99e-19;83!UBERON:0002037;3.32e-15;6!UBERON:0000200;3.13e-14;6!UBERON:0002680;6.60e-14;9!UBERON:0001895;6.60e-14;9!UBERON:0004733;1.26e-13;12!UBERON:0002028;1.26e-13;12!UBERON:0004732;1.68e-12;13!UBERON:0001872;1.40e-11;5!UBERON:0000349;1.60e-11;5!UBERON:0001870;5.28e-11;3!UBERON:0001871;1.33e-08;6!UBERON:0001954;7.38e-08;2!UBERON:0003022;7.38e-08;2!UBERON:0002421;7.38e-08;2!UBERON:0002600;7.38e-08;2!UBERON:0002702;9.92e-08;2!UBERON:0002021;6.06e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.18e-53,81;UBERON:0001016,1.02e-49,89;UBERON:0000955,1.15e-43,68;UBERON:0006238,1.15e-43,68;UBERON:0000073,8.60e-41,53;UBERON:0002616,8.60e-41,53;UBERON:0002619,1.39e-40,22;UBERON:0001049,2.85e-38,56;UBERON:0005068,2.85e-38,56;UBERON:0006241,2.85e-38,56;UBERON:0007135,2.85e-38,56;UBERON:0000956,2.14e-35,25;UBERON:0000203,2.14e-35,25;UBERON:0001950,8.08e-35,20;UBERON:0001869,4.47e-34,32;UBERON:0001893,7.58e-32,34;UBERON:0003075,1.63e-30,82;UBERON:0007284,1.63e-30,82;UBERON:0002791,2.20e-30,32;UBERON:0002346,9.30e-29,86;UBERON:0002780,1.57e-28,41;UBERON:0001890,1.57e-28,41;UBERON:0003080,1.57e-28,41;UBERON:0006240,1.57e-28,41;UBERON:0003528,2.20e-28,34;UBERON:0002020,2.20e-28,34;UBERON:0004121,3.34e-26,171;UBERON:0000924,3.34e-26,171;UBERON:0006601,3.34e-26,171;UBERON:0010371,2.13e-24,104;UBERON:0003056,4.92e-24,61;UBERON:0011216,8.90e-18,223;UBERON:0010314,1.43e-17,132;UBERON:0002037,3.74e-15,6;UBERON:0006215,3.74e-15,6;UBERON:0000200,2.26e-14,6;UBERON:0002680,5.83e-14,9;UBERON:0001895,5.83e-14,9;UBERON:0010092,5.83e-14,9;UBERON:0004733,1.26e-13,12;UBERON:0002028,1.26e-13,12;UBERON:0007277,1.26e-13,12;UBERON:0007023,6.90e-13,114;UBERON:0004732,1.69e-12,13;UBERON:0001872,1.36e-11,5;UBERON:0000349,1.79e-11,5;UBERON:0001870,3.73e-11,3;UBERON:0003076,1.07e-10,15;UBERON:0003057,1.07e-10,15;UBERON:0001871,1.43e-08,6;UBERON:0002702,7.78e-08,2;UBERON:0001954,8.06e-08,2;UBERON:0003022,8.06e-08,2;UBERON:0002421,8.06e-08,2;UBERON:0002600,8.06e-08,2;UBERON:0002021,5.36e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,2.09305798730539,0.408001382488506,1.25381888591235,0.572471974262113,0,0.376627918784408,0,0,0,0,1.15148819429164,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13030 | |||
|TSSclassifier=S | |||
|UniProt=Q99592 | |||
|association_with_transcript=26bp_to_ENST00000358704_5end | |||
|coexpression_cluster_id=C2575 | |||
|description=CAGE_peak_4_at_ZNF238_5end | |||
|id=chr1:244214611..244214624,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.13e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.49e-12;3!CL:0002319;2.44e-11;25!CL:0000047;4.42e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.50e-12,3;CL:0000047,1.42e-11,8;CL:0002319,2.09e-11,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.59e-12;3!UBERON:0006601;2.36e-08;82!UBERON:0006238;8.25e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.11e-42!86;UBERON:0001017!3.12e-41!82;UBERON:0000073!3.45e-41!94;UBERON:0001016!3.45e-41!94;UBERON:0000955!4.02e-35!69;UBERON:0006238!4.02e-35!69;UBERON:0001049!7.18e-35!57;UBERON:0005068!7.18e-35!57;UBERON:0006241!7.18e-35!57;UBERON:0007135!7.18e-35!57;UBERON:0003075!1.96e-33!86;UBERON:0007284!1.96e-33!86;UBERON:0002616!2.50e-33!59;UBERON:0002346!1.43e-32!90;UBERON:0000956!2.55e-28!25;UBERON:0000203!2.55e-28!25;UBERON:0002619!1.47e-27!22;UBERON:0001893!4.08e-25!34;UBERON:0001869!4.47e-25!32;UBERON:0004121!7.50e-25!169;UBERON:0001950!8.40e-25!20;UBERON:0000924!1.07e-24!173;UBERON:0006601!1.07e-24!173;UBERON:0002020!1.57e-24!34;UBERON:0003528!1.57e-24!34;UBERON:0002780!1.71e-24!41;UBERON:0001890!1.71e-24!41;UBERON:0006240!1.71e-24!41;UBERON:0000153!2.16e-24!129;UBERON:0007811!2.16e-24!129;UBERON:0003056!4.73e-24!61;UBERON:0002791!8.47e-24!33;UBERON:0003080!1.08e-23!42;UBERON:0000033!6.22e-23!123;UBERON:0007023!1.59e-15!115;UBERON:0004733!6.52e-14!12;UBERON:0002028!6.52e-14!12;UBERON:0007277!6.52e-14!12;UBERON:0002680!4.45e-13!9;UBERON:0001895!4.45e-13!9;UBERON:0010092!4.45e-13!9;UBERON:0004732!1.31e-12!13;UBERON:0003076!2.40e-12!15;UBERON:0003057!2.40e-12!15;UBERON:0002037!4.42e-10!6;UBERON:0006215!4.42e-10!6;UBERON:0000200!7.72e-10!6;UBERON:0001871!9.95e-10!7;UBERON:0001872!1.47e-08!5;UBERON:0000349!1.59e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.78e-40;22!UBERON:0000956;2.66e-35;25!UBERON:0000203;2.66e-35;25!UBERON:0001950;1.10e-34;20!UBERON:0001869;9.61e-31;32!UBERON:0001893;1.70e-27;34!UBERON:0002791;3.70e-27;32!UBERON:0003528;3.86e-25;34!UBERON:0002020;3.86e-25;34!UBERON:0000073;5.23e-23;53!UBERON:0002616;5.23e-23;53!UBERON:0000955;1.88e-20;68!UBERON:0002780;5.04e-20;41!UBERON:0001890;5.04e-20;41!UBERON:0001017;4.00e-19;75!UBERON:0001016;6.99e-19;83!UBERON:0002037;3.32e-15;6!UBERON:0000200;3.13e-14;6!UBERON:0002680;6.60e-14;9!UBERON:0001895;6.60e-14;9!UBERON:0004733;1.26e-13;12!UBERON:0002028;1.26e-13;12!UBERON:0004732;1.68e-12;13!UBERON:0001872;1.40e-11;5!UBERON:0000349;1.60e-11;5!UBERON:0001870;5.28e-11;3!UBERON:0001871;1.33e-08;6!UBERON:0001954;7.38e-08;2!UBERON:0003022;7.38e-08;2!UBERON:0002421;7.38e-08;2!UBERON:0002600;7.38e-08;2!UBERON:0002702;9.92e-08;2!UBERON:0002021;6.06e-07;5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,2.09305798730539,0.408001382488506,1.25381888591235,0.572471974262113,0,0.376627918784408,0,0,0,0,1.15148819429164,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.392937226493138,0,0,0,0,0,26.9494405465036,16.0158575018436,37.8886651356156,0,0,0,0,0,0,0,1.29208379584664,1.06729878806013,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.705264687593482,0,0,0,0,0,0,0.116193942869518,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,1.44331342025273,1.27523445472584,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,20.8223766172195,12.3726210044431,34.8433831895445,24.2416725628202,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.96670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0.340906509664404,2.58192903375538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,5.96488588659779,0.984685914873589,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,4.84666373047609,1.20598527610407,17.9652418201075,0,0,0,0,0,0,0.344743373241465,0,0,0,0,27.464712537075,15.8128341701651,36.0568095123328,5.70402032600329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,29.6890578781575,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,3.17722056089401,0.225980740780532,0,0,3.73533696139684,0,0,0,0,0,0,3.60349495510126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,3.18091875923721,1.22583065500418,0,0,0,0.2249738915515,0,4.07022029608765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.19647276823534,1.502291168478,0,1.10929051536852,0.496771223531068,1.93688088910723,0,0,0,0,0.936669811613763,5.79684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.829550616910385,0.779441235357554,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,4.47630299562781,0.431299245586727,0,0.54604819096007,0,0.212574920101683,0,0,0,0,0,0,0,2.11956442818316,0,0.478901577171454,2.46139637088906,33.5255355974885,1.59061680667701,2.26065903884592,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,2.83657855397258,1.56215619722769,0.826747186004736,2.02930592620502,34.4594129681478,0,0,0,0,0,1.00885116665647,0,0,0.0887023701626388,0,0,1.97112225632812,2.49936539538827,0,0,0,0,0,0,0,0,0.285906176706625,3.47629945811999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,3.58111395290463,0.237840181555137,0,0.879524133963433,0,0,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05961705859116,20.0721317556574,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0.20686599172379,0,0.476128862927481,0.710478008196067,1.05527014302958,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ZNF238 | |||
}} |
Revision as of 04:39, 12 September 2013
Short description: | p4@ZNF238 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ZNF238_5end |
Coexpression cluster: | C2575_cerebellum_Neurons_occipital_duodenum_temporal_parietal_brain |
Association with transcript: | 26bp_to_ENST00000358704_5end |
EntrezGene: | ZNF238 |
HGNC: | 13030 |
UniProt: | Q99592 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.50e-12 | 3 |
neuronal stem cell | 1.42e-11 | 8 |
neural cell | 2.09e-11 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.