FFCP PHASE1:Hg19::chr10:73848262..73848315,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9806|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13564|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000495888_5end|coexpression_cluster_id=C676|description=CAGE_peak_1_at_SPOCK2_5end|id=chr10:73848262..73848315,-|ontology_enrichment_celltype=CL:0000738!4.71e-19!140;CL:0002087!2.09e-15!119;CL:0000791!1.30e-14!18;CL:0000789!1.30e-14!18;CL:0002420!1.30e-14!18;CL:0002419!1.30e-14!18;CL:0000790!1.30e-14!18;CL:0002031!2.51e-12!124;CL:0000542!1.17e-11!53;CL:0000051!1.17e-11!53;CL:0000838!1.99e-11!52;CL:0000084!1.43e-10!25;CL:0000827!1.43e-10!25;CL:0000037!1.85e-10!172;CL:0000566!1.85e-10!172;CL:0000625!1.52e-09!11;CL:0000988!1.86e-09!182;CL:0002032!9.26e-09!165;CL:0000837!9.26e-09!165|ontology_enrichment_celltype_v019=CL:0000791;2.49e-16;18!CL:0000789;2.49e-16;18!CL:0002419;2.49e-16;18!CL:0000084;1.89e-11;25!CL:0000625;1.36e-10;11!CL:0000542;7.81e-08;53!CL:0000624;6.94e-07;6!CL:0002087;8.96e-07;104|ontology_enrichment_celltype_v019_2=CL:0000738,2.45e-19,136;CL:0002087,2.18e-16,115;CL:0000791,2.51e-16,18;CL:0000789,2.51e-16,18;CL:0002420,2.51e-16,18;CL:0002419,2.51e-16,18;CL:0000790,2.51e-16,18;CL:0002031,3.77e-12,120;CL:0000542,4.71e-12,53;CL:0000051,4.71e-12,53;CL:0000838,8.52e-12,52;CL:0000084,1.81e-11,25;CL:0000827,1.81e-11,25;CL:0000037,1.29e-10,168;CL:0000625,1.36e-10,11;CL:0000988,8.75e-10,177;CL:0002032,4.85e-09,161;CL:0000837,4.85e-09,161;CL:0000624,6.95e-07,6|ontology_enrichment_development_v019=CL:0000790;2.49e-16;18!CL:0000051;7.81e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.31e-45!115;UBERON:0001049!8.89e-27!57;UBERON:0005068!8.89e-27!57;UBERON:0006241!8.89e-27!57;UBERON:0007135!8.89e-27!57;UBERON:0002616!8.21e-22!59;UBERON:0002780!6.09e-21!41;UBERON:0001890!6.09e-21!41;UBERON:0006240!6.09e-21!41;UBERON:0003080!6.76e-21!42;UBERON:0001017!1.22e-20!82;UBERON:0005743!2.85e-19!86;UBERON:0002020!3.34e-18!34;UBERON:0003528!3.34e-18!34;UBERON:0001893!4.34e-18!34;UBERON:0000955!7.23e-18!69;UBERON:0006238!7.23e-18!69;UBERON:0000073!1.27e-17!94;UBERON:0001016!1.27e-17!94;UBERON:0002791!1.62e-17!33;UBERON:0001869!1.93e-17!32;UBERON:0003075!2.89e-17!86;UBERON:0007284!2.89e-17!86;UBERON:0002346!7.87e-16!90;UBERON:0000956!1.53e-13!25;UBERON:0000203!1.53e-13!25;UBERON:0002619!1.59e-13!22;UBERON:0001950!1.78e-12!20;UBERON:0003056!2.79e-12!61;UBERON:0000153!3.41e-08!129;UBERON:0007811!3.41e-08!129;UBERON:0003076!4.37e-07!15;UBERON:0003057!4.37e-07!15|ontology_enrichment_uberon_v019=UBERON:0001869;6.31e-17;32!UBERON:0003528;8.62e-17;34!UBERON:0002020;8.62e-17;34!UBERON:0001893;9.16e-17;34!UBERON:0002791;1.13e-16;32!UBERON:0002780;2.92e-16;41!UBERON:0001890;2.92e-16;41!UBERON:0000073;3.43e-16;53!UBERON:0002616;3.43e-16;53!UBERON:0002619;4.18e-15;22!UBERON:0000956;2.60e-14;25!UBERON:0000203;2.60e-14;25!UBERON:0001950;6.45e-14;20!UBERON:0007023;1.71e-13;114!UBERON:0000955;9.45e-10;68!UBERON:0001017;1.06e-09;75!UBERON:0001016;4.88e-08;83!UBERON:0004732;6.77e-07;13!UBERON:0002420;8.63e-07;9!UBERON:0007245;8.63e-07;9!UBERON:0010009;8.63e-07;9!UBERON:0010011;8.63e-07;9!UBERON:0000454;8.63e-07;9!UBERON:0000125;9.52e-07;9!UBERON:0002308;9.52e-07;9!UBERON:0000178;9.87e-07;15!UBERON:0000179;9.87e-07;15!UBERON:0000463;9.87e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.91e-49,114;UBERON:0001049,2.09e-29,56;UBERON:0005068,2.09e-29,56;UBERON:0006241,2.09e-29,56;UBERON:0007135,2.09e-29,56;UBERON:0000073,8.69e-28,53;UBERON:0002616,8.69e-28,53;UBERON:0002780,1.24e-22,41;UBERON:0001890,1.24e-22,41;UBERON:0003080,1.24e-22,41;UBERON:0006240,1.24e-22,41;UBERON:0001017,2.45e-21,81;UBERON:0000955,6.24e-20,68;UBERON:0006238,6.24e-20,68;UBERON:0003528,1.60e-19,34;UBERON:0002020,1.60e-19,34;UBERON:0001893,2.14e-19,34;UBERON:0001869,1.17e-18,32;UBERON:0001016,2.18e-18,89;UBERON:0002791,2.61e-18,32;UBERON:0003075,1.33e-17,82;UBERON:0007284,1.33e-17,82;UBERON:0002346,8.94e-16,86;UBERON:0002619,4.28e-15,22;UBERON:0000956,2.87e-14,25;UBERON:0000203,2.87e-14,25;UBERON:0001950,6.60e-14,20;UBERON:0003056,2.48e-12,61;UBERON:0010371,1.44e-10,104;UBERON:0010314,5.89e-08,132;UBERON:0003076,6.25e-08,15;UBERON:0003057,6.25e-08,15;UBERON:0011216,1.70e-07,223;UBERON:0004732,6.55e-07,13;UBERON:0000025,6.66e-07,192;UBERON:0002420,8.77e-07,9;UBERON:0007245,8.77e-07,9;UBERON:0010009,8.77e-07,9;UBERON:0010011,8.77e-07,9;UBERON:0000454,8.77e-07,9;UBERON:0000125,9.60e-07,9;UBERON:0002308,9.60e-07,9;UBERON:0000178,9.89e-07,15;UBERON:0000179,9.89e-07,15;UBERON:0000463,9.89e-07,15|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,52.0955945383199,221.20297024726,0,0.527533956456907,0,1.32558950291166,0,0,0,0,2.83178433576612,0,3.76145665773705,6.01095572975219,3.14811177667634,0.87879847716362,0,0,0,124.303111484254,312.053300653034,55.8886205171034,0,0,0,0,0,0.587200878669695,71.4654077006122,108.093457186406,113.930707125822,8.06095707263728,28.5026426096702,12.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000495888_5end | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_1_at_SPOCK2_5end | |||
|id=chr10:73848262..73848315,- | |||
|ontology_enrichment_celltype=CL:0000738!4.71e-19!140;CL:0002087!2.09e-15!119;CL:0000791!1.30e-14!18;CL:0000789!1.30e-14!18;CL:0002420!1.30e-14!18;CL:0002419!1.30e-14!18;CL:0000790!1.30e-14!18;CL:0002031!2.51e-12!124;CL:0000542!1.17e-11!53;CL:0000051!1.17e-11!53;CL:0000838!1.99e-11!52;CL:0000084!1.43e-10!25;CL:0000827!1.43e-10!25;CL:0000037!1.85e-10!172;CL:0000566!1.85e-10!172;CL:0000625!1.52e-09!11;CL:0000988!1.86e-09!182;CL:0002032!9.26e-09!165;CL:0000837!9.26e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.49e-16;18!CL:0000789;2.49e-16;18!CL:0002419;2.49e-16;18!CL:0000084;1.89e-11;25!CL:0000625;1.36e-10;11!CL:0000542;7.81e-08;53!CL:0000624;6.94e-07;6!CL:0002087;8.96e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.45e-19,136;CL:0002087,2.18e-16,115;CL:0000791,2.51e-16,18;CL:0000789,2.51e-16,18;CL:0002420,2.51e-16,18;CL:0002419,2.51e-16,18;CL:0000790,2.51e-16,18;CL:0002031,3.77e-12,120;CL:0000542,4.71e-12,53;CL:0000051,4.71e-12,53;CL:0000838,8.52e-12,52;CL:0000084,1.81e-11,25;CL:0000827,1.81e-11,25;CL:0000037,1.29e-10,168;CL:0000625,1.36e-10,11;CL:0000988,8.75e-10,177;CL:0002032,4.85e-09,161;CL:0000837,4.85e-09,161;CL:0000624,6.95e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.49e-16;18!CL:0000051;7.81e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.91e-49,114;UBERON:0001049,2.09e-29,56;UBERON:0005068,2.09e-29,56;UBERON:0006241,2.09e-29,56;UBERON:0007135,2.09e-29,56;UBERON:0000073,8.69e-28,53;UBERON:0002616,8.69e-28,53;UBERON:0002780,1.24e-22,41;UBERON:0001890,1.24e-22,41;UBERON:0003080,1.24e-22,41;UBERON:0006240,1.24e-22,41;UBERON:0001017,2.45e-21,81;UBERON:0000955,6.24e-20,68;UBERON:0006238,6.24e-20,68;UBERON:0003528,1.60e-19,34;UBERON:0002020,1.60e-19,34;UBERON:0001893,2.14e-19,34;UBERON:0001869,1.17e-18,32;UBERON:0001016,2.18e-18,89;UBERON:0002791,2.61e-18,32;UBERON:0003075,1.33e-17,82;UBERON:0007284,1.33e-17,82;UBERON:0002346,8.94e-16,86;UBERON:0002619,4.28e-15,22;UBERON:0000956,2.87e-14,25;UBERON:0000203,2.87e-14,25;UBERON:0001950,6.60e-14,20;UBERON:0003056,2.48e-12,61;UBERON:0010371,1.44e-10,104;UBERON:0010314,5.89e-08,132;UBERON:0003076,6.25e-08,15;UBERON:0003057,6.25e-08,15;UBERON:0011216,1.70e-07,223;UBERON:0004732,6.55e-07,13;UBERON:0000025,6.66e-07,192;UBERON:0002420,8.77e-07,9;UBERON:0007245,8.77e-07,9;UBERON:0010009,8.77e-07,9;UBERON:0010011,8.77e-07,9;UBERON:0000454,8.77e-07,9;UBERON:0000125,9.60e-07,9;UBERON:0002308,9.60e-07,9;UBERON:0000178,9.89e-07,15;UBERON:0000179,9.89e-07,15;UBERON:0000463,9.89e-07,15 | |||
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| |||
|short_description=p1@SPOCK2 | |||
}} |
Revision as of 14:17, 10 September 2013
Short description: | p1@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SPOCK2_5end |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | 0bp_to_ENST00000495888_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.45e-19 | 136 |
nongranular leukocyte | 2.18e-16 | 115 |
mature alpha-beta T cell | 2.51e-16 | 18 |
alpha-beta T cell | 2.51e-16 | 18 |
immature T cell | 2.51e-16 | 18 |
mature T cell | 2.51e-16 | 18 |
immature alpha-beta T cell | 2.51e-16 | 18 |
hematopoietic lineage restricted progenitor cell | 3.77e-12 | 120 |
lymphocyte | 4.71e-12 | 53 |
common lymphoid progenitor | 4.71e-12 | 53 |
lymphoid lineage restricted progenitor cell | 8.52e-12 | 52 |
T cell | 1.81e-11 | 25 |
pro-T cell | 1.81e-11 | 25 |
hematopoietic stem cell | 1.29e-10 | 168 |
CD8-positive, alpha-beta T cell | 1.36e-10 | 11 |
hematopoietic cell | 8.75e-10 | 177 |
hematopoietic oligopotent progenitor cell | 4.85e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.85e-09 | 161 |
CD4-positive, alpha-beta T cell | 6.95e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.