FFCP PHASE1:Hg19::chr10:90699296..90699439,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-157bp_to_AK127229_5end|coexpression_cluster_id=C508|description=CAGE_peak_1_at_AK127229_5end|id=chr10:90699296..90699439,-|ontology_enrichment_celltype=CL:0000055!2.61e-21!180;CL:0000187!2.65e-13!54;CL:0000680!6.04e-13!57;CL:0000056!6.04e-13!57;CL:0000355!6.04e-13!57;CL:0000393!1.11e-11!60;CL:0000211!1.11e-11!60;CL:0000183!2.02e-11!59;CL:0000192!3.83e-11!42;CL:0000514!3.83e-11!42;CL:0000057!6.71e-10!75;CL:0000359!2.79e-08!32|ontology_enrichment_celltype_v019=CL:0000359;6.17e-07;32!CL:0000192;6.19e-07;43|ontology_enrichment_celltype_v019_2=CL:0000192,6.53e-09,43;CL:0000514,6.53e-09,43;CL:0000187,8.00e-09,55;CL:0000057,2.78e-08,76;CL:0000680,6.16e-08,58;CL:0000056,6.16e-08,58;CL:0000355,6.16e-08,58;CL:0000393,8.69e-08,61;CL:0000211,8.69e-08,61;CL:0000359,1.78e-07,32|ontology_enrichment_development_v019=CL:0000514;6.19e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002385!1.48e-14!63;UBERON:0001015!1.48e-14!63;UBERON:0000383!1.48e-14!63;UBERON:0001134!1.25e-13!61;UBERON:0002036!1.25e-13!61;UBERON:0003082!1.25e-13!61;UBERON:0004290!1.91e-12!70;UBERON:0000914!2.97e-11!83;UBERON:0002329!2.97e-11!83;UBERON:0003077!2.97e-11!83;UBERON:0003059!2.97e-11!83;UBERON:0007282!2.97e-11!83;UBERON:0009618!2.97e-11!83;UBERON:0007285!2.97e-11!83;UBERON:0000475!3.06e-09!365;UBERON:0000486!4.52e-09!82;UBERON:0005256!5.35e-08!143;UBERON:0004872!5.88e-08!84;UBERON:0007023!8.20e-08!115;UBERON:0007100!9.92e-08!27;UBERON:0000481!1.54e-07!347;UBERON:0002100!1.93e-07!216;UBERON:0000948!8.13e-07!24;UBERON:0005498!8.13e-07!24;UBERON:0004140!8.13e-07!24;UBERON:0009881!8.13e-07!24;UBERON:0004141!8.13e-07!24;UBERON:0003084!8.13e-07!24;UBERON:0007005!8.13e-07!24;UBERON:0004139!8.13e-07!24;UBERON:0004291!8.13e-07!24|ontology_enrichment_uberon_v019=UBERON:0003688;3.85e-07;6!UBERON:0002358;3.85e-07;6!UBERON:0003684;3.85e-07;6!UBERON:0001178;3.85e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002385,5.51e-10,64;UBERON:0001015,5.51e-10,64;UBERON:0000383,5.51e-10,64;UBERON:0007524,1.84e-09,73;UBERON:0001134,5.69e-09,62;UBERON:0002036,5.69e-09,62;UBERON:0003082,5.69e-09,62;UBERON:0003077,7.06e-09,72;UBERON:0007285,7.06e-09,72;UBERON:0002329,1.44e-08,71;UBERON:0003059,1.44e-08,71;UBERON:0007282,1.44e-08,71;UBERON:0004290,1.44e-08,71;UBERON:0009618,1.44e-08,71;UBERON:0003104,1.83e-08,160;UBERON:0009142,1.83e-08,160;UBERON:0005256,1.94e-08,122;UBERON:0007503,1.74e-07,78;UBERON:0003688,5.62e-07,6;UBERON:0002358,5.62e-07,6;UBERON:0003684,5.62e-07,6;UBERON:0001178,5.62e-07,6;UBERON:0007023,6.24e-07,114;UBERON:0002100,7.04e-07,199|phase1_expression=3.08853244759946,12.203729861786,6.06103937612676,25.0183245882826,29.9463933266283,27.0424942471114,68.3909671054438,0,0.783556884599516,0.245733936501509,1.39560233594486,0,0,0,0,4.03395087871065,1.80808358407193,1.46062018077475,1.95173119516203,0.123121058076788,0.816002764977012,5.01527554364941,0.286235987131057,0.547497700291537,1.38096903554283,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,4.87613732627923,1.34140171940727,2.9408389224012,0.361439152384566,2.00535164254356,0.579386075843295,0,0.486634870302636,1.13441780596881,4.65631734671384,1.93236528524877,3.01251873644739,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,20.8728219712034,2.5326102332916,0.132409180813219,0.860509862246441,0,11.7742296029885,19.2148192313469,8.88003174301776,0.311211035399766,0.538842688278752,0.490385709340376,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,2.37600571456411,9.1488763833066,0,2.15585442544872,0,0,0,1.75591048352335,20.5346823185343,5.55880817954408,2.38207584636044,2.51145489964407,2.98980344345994,1.48352330811693,0.300091096084402,1.44273540933814,1.03056216018252,1.67505170698431,0.168776332241266,4.77441325289873,2.01947019395292,2.57739716198438,0.969876340912871,4.61512470271599,6.14587799188606,2.03472710772585,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,4.5026865673502,1.38134921352481,1.85747171212792,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,1.2347220339942,7.3504355692771,0,0,1.18157981336281,0,0,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,1.03993478527958,0,0.231860809950154,3.52226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0.600686115687835,0.85747929789173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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-157bp_to_AK127229_5end | |||
|coexpression_cluster_id=C508 | |||
|description=CAGE_peak_1_at_AK127229_5end | |||
|id=chr10:90699296..90699439,- | |||
|ontology_enrichment_celltype=CL:0000055!2.61e-21!180;CL:0000187!2.65e-13!54;CL:0000680!6.04e-13!57;CL:0000056!6.04e-13!57;CL:0000355!6.04e-13!57;CL:0000393!1.11e-11!60;CL:0000211!1.11e-11!60;CL:0000183!2.02e-11!59;CL:0000192!3.83e-11!42;CL:0000514!3.83e-11!42;CL:0000057!6.71e-10!75;CL:0000359!2.79e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.17e-07;32!CL:0000192;6.19e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.53e-09,43;CL:0000514,6.53e-09,43;CL:0000187,8.00e-09,55;CL:0000057,2.78e-08,76;CL:0000680,6.16e-08,58;CL:0000056,6.16e-08,58;CL:0000355,6.16e-08,58;CL:0000393,8.69e-08,61;CL:0000211,8.69e-08,61;CL:0000359,1.78e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.19e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.48e-14!63;UBERON:0001015!1.48e-14!63;UBERON:0000383!1.48e-14!63;UBERON:0001134!1.25e-13!61;UBERON:0002036!1.25e-13!61;UBERON:0003082!1.25e-13!61;UBERON:0004290!1.91e-12!70;UBERON:0000914!2.97e-11!83;UBERON:0002329!2.97e-11!83;UBERON:0003077!2.97e-11!83;UBERON:0003059!2.97e-11!83;UBERON:0007282!2.97e-11!83;UBERON:0009618!2.97e-11!83;UBERON:0007285!2.97e-11!83;UBERON:0000475!3.06e-09!365;UBERON:0000486!4.52e-09!82;UBERON:0005256!5.35e-08!143;UBERON:0004872!5.88e-08!84;UBERON:0007023!8.20e-08!115;UBERON:0007100!9.92e-08!27;UBERON:0000481!1.54e-07!347;UBERON:0002100!1.93e-07!216;UBERON:0000948!8.13e-07!24;UBERON:0005498!8.13e-07!24;UBERON:0004140!8.13e-07!24;UBERON:0009881!8.13e-07!24;UBERON:0004141!8.13e-07!24;UBERON:0003084!8.13e-07!24;UBERON:0007005!8.13e-07!24;UBERON:0004139!8.13e-07!24;UBERON:0004291!8.13e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.85e-07;6!UBERON:0002358;3.85e-07;6!UBERON:0003684;3.85e-07;6!UBERON:0001178;3.85e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,5.51e-10,64;UBERON:0001015,5.51e-10,64;UBERON:0000383,5.51e-10,64;UBERON:0007524,1.84e-09,73;UBERON:0001134,5.69e-09,62;UBERON:0002036,5.69e-09,62;UBERON:0003082,5.69e-09,62;UBERON:0003077,7.06e-09,72;UBERON:0007285,7.06e-09,72;UBERON:0002329,1.44e-08,71;UBERON:0003059,1.44e-08,71;UBERON:0007282,1.44e-08,71;UBERON:0004290,1.44e-08,71;UBERON:0009618,1.44e-08,71;UBERON:0003104,1.83e-08,160;UBERON:0009142,1.83e-08,160;UBERON:0005256,1.94e-08,122;UBERON:0007503,1.74e-07,78;UBERON:0003688,5.62e-07,6;UBERON:0002358,5.62e-07,6;UBERON:0003684,5.62e-07,6;UBERON:0001178,5.62e-07,6;UBERON:0007023,6.24e-07,114;UBERON:0002100,7.04e-07,199 | |||
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| |||
|short_description=p1@AK127229 | |||
}} |
Revision as of 14:51, 10 September 2013
Short description: | p1@AK127229 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK127229_5end |
Coexpression cluster: | C508_Adipocyte_aorta_smooth_umbilical_bladder_hepatic_penis |
Association with transcript: | -157bp_to_AK127229_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.53e-09 | 43 |
smooth muscle myoblast | 6.53e-09 | 43 |
muscle cell | 8.00e-09 | 55 |
fibroblast | 2.78e-08 | 76 |
muscle precursor cell | 6.16e-08 | 58 |
myoblast | 6.16e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.16e-08 | 58 |
electrically responsive cell | 8.69e-08 | 61 |
electrically active cell | 8.69e-08 | 61 |
vascular associated smooth muscle cell | 1.78e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 5.51e-10 | 64 |
musculature | 5.51e-10 | 64 |
musculature of body | 5.51e-10 | 64 |
dense mesenchyme tissue | 1.84e-09 | 73 |
skeletal muscle tissue | 5.69e-09 | 62 |
striated muscle tissue | 5.69e-09 | 62 |
myotome | 5.69e-09 | 62 |
paraxial mesoderm | 7.06e-09 | 72 |
presumptive paraxial mesoderm | 7.06e-09 | 72 |
somite | 1.44e-08 | 71 |
presomitic mesoderm | 1.44e-08 | 71 |
presumptive segmental plate | 1.44e-08 | 71 |
dermomyotome | 1.44e-08 | 71 |
trunk paraxial mesoderm | 1.44e-08 | 71 |
mesenchyme | 1.83e-08 | 160 |
entire embryonic mesenchyme | 1.83e-08 | 160 |
trunk mesenchyme | 1.94e-08 | 122 |
epithelial vesicle | 1.74e-07 | 78 |
omentum | 5.62e-07 | 6 |
peritoneum | 5.62e-07 | 6 |
abdominal cavity | 5.62e-07 | 6 |
visceral peritoneum | 5.62e-07 | 6 |
adult organism | 6.24e-07 | 114 |
trunk | 7.04e-07 | 199 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.