FFCP PHASE1:Hg19::chr10:104403921..104403965,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81603|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15579|TSSclassifier=W|UniProt=Q9BZR9|association_with_transcript=-286bp_to_ENST00000302424,NM_030912,uc001kvz.2_5end|description=CAGE_peak_4_at_TRIM8_5end|id=chr10:104403921..104403965,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002334;3.51e-08;12|ontology_enrichment_celltype_v019_2=CL:0002334,2.39e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004457;8.14e-10;9!UBERON:0000042;8.14e-10;9!UBERON:0003688;2.24e-08;6!UBERON:0002358;2.24e-08;6!UBERON:0003684;2.24e-08;6!UBERON:0001178;2.24e-08;6!UBERON:0003513;8.23e-08;7|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.88e-08,12;UBERON:0000042,1.88e-08,12;UBERON:0003688,3.70e-08,6;UBERON:0002358,3.70e-08,6;UBERON:0003684,3.70e-08,6;UBERON:0001178,3.70e-08,6;UBERON:0003513,1.04e-07,7|phase1_expression=1.99846217197612,2.14100523890983,2.81908808191942,1.0007329835313,2.23480547213644,0.872338524100369,0,1.26343974685366,2.61185628199839,0,0,0,0.263766978228454,0.37129905888014,0,0,0,0.730310090387373,0,0,0,0.626909442956176,0,0.410623275218653,0.251085279189606,0.152826811495903,0.57470412614962,0.157421562627358,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.284338464974843,0.587200878669695,0.553995408531877,0.401088894940283,0.434021741431704,1.11957737119962,0.647787332037959,1.28787783817093,1.74477886535478,1.51150377475524,1.4555043671269,0.464858073811369,0,0.309706370895104,0,0,0,0,0,0,0,0.545812300115692,0.449446968890169,0.306083892370903,0.320929027076094,0,0.659702600373432,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0.422510572623884,0.637812899895131,0.209658645508376,0.112328631146495,0.450530678524519,0,0.855038231223746,0.39783335439818,0.182664153764634,0,0,0,0,0.800791974072025,0,1.32208974556972,0,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0,1.31692042387539,0.196709770113833,0.393010762749165,0,0.668745981562712,0.32592226663359,0,0,0.668462741311041,0.589211814949674,0.443067789167242,0,0.640456598628376,0.260118695119756,0.822189523018381,0.276350017785848,0.289803085735052,0.14828656316206,0.535081656179426,0,0.453237370790265,0,0,0.253019692019503,0.318565414324097,1.95325036156926,0.950452044448374,0.602300476311091,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0,0,1.34140171940727,0,1.0843174571537,6.51739283826656,1.59331170856906,0,0,0.283604451492204,0,0.087834785693126,1.37528029272598,0.364295288292542,0.741568885568859,0.649094787309367,0.174129737299267,0.132957960518865,0.476981248610684,1.14398982156026,0.371457501329565,0.596287222100115,0,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,0.626984899610432,0.258416759169329,0,0.66944122552934,2.41697590265488,0.760272105718513,1.22031028774085,0.367663080345869,0.81014194788176,0.446498641420399,0,0.225222960966644,0,0,0,1.31780417436063,0,0,0.993943903390637,2.02608818663328,0,0.860509862246441,1.41867352879343,0,0,0.74000264525148,0.311211035399766,0.67355336034844,0.326923806226917,0.302714855289863,0.576175924479999,0.937285727335186,1.24864030732128,0,1.19558944441441,0,0.161872944368132,0,0,0,0.826606249406124,9.50402285825643,2.47266929278557,0,0,0,0,0,0,0.612975591598039,2.55404700141215,0,0,0.213557388818567,0.635795703478686,0.600182192168805,0.103052529238439,0,0.558350568994769,0,0.487185025805993,0,0.552299391853796,0.646584227275248,0.710019185033229,0.302256294682921,0.339121184620975,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0.474541238222193,0,0,0,2.21446636387394,2.80483547606892,0.8231480226628,0,1.26755034821831,0,0,0,0.122988438543114,0,0.439001141634502,0,0.100528972411631,0.462942225792648,0.651616610620649,0,0,0,0,0.288732895522148,0.925971025153221,0.380508304469197,0.790204397959275,2.57545848628462,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0.766765358330422,0,1.58487181223807,2.07328115540772,3.31475892859011,3.28230326908588,0.063497894292169,2.67391897890794,5.86087236050235,1.71072446022705,0.205654985406647,0,0.285826432630578,0,1.30788020649984,0.2933531432838,0,7.15312891703765,0,1.06375246633948,2.08014873822732,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,3.01439377059586,0,2.49932477955143,0,0.502257091432126,0,0.958499421966331,0,0,0.289562613335158,0.205476322550383,1.25342674267927,0,0.394061520403854,0.215627574859517,0.128343036279748,1.52456774533478,0,0,0.335032530668698,0.637938751653163,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81603 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15579 | |||
|TSSclassifier=W | |||
|UniProt=Q9BZR9 | |||
|association_with_transcript=-286bp_to_ENST00000302424,NM_030912,uc001kvz.2_5end | |||
|description=CAGE_peak_4_at_TRIM8_5end | |||
|id=chr10:104403921..104403965,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.51e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.39e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.14e-10;9!UBERON:0000042;8.14e-10;9!UBERON:0003688;2.24e-08;6!UBERON:0002358;2.24e-08;6!UBERON:0003684;2.24e-08;6!UBERON:0001178;2.24e-08;6!UBERON:0003513;8.23e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.88e-08,12;UBERON:0000042,1.88e-08,12;UBERON:0003688,3.70e-08,6;UBERON:0002358,3.70e-08,6;UBERON:0003684,3.70e-08,6;UBERON:0001178,3.70e-08,6;UBERON:0003513,1.04e-07,7 | |||
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| |||
|short_description=p4@TRIM8 | |||
}} |
Revision as of 11:27, 10 September 2013
Short description: | p4@TRIM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TRIM8_5end |
Coexpression cluster: | NA |
Association with transcript: | -286bp_to_ENST00000302424, NM_030912, uc001kvz.2_5end |
EntrezGene: | TRIM8 |
HGNC: | 15579 |
UniProt: | Q9BZR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.39e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.88e-08 | 12 |
serous membrane | 1.88e-08 | 12 |
omentum | 3.70e-08 | 6 |
peritoneum | 3.70e-08 | 6 |
abdominal cavity | 3.70e-08 | 6 |
visceral peritoneum | 3.70e-08 | 6 |
trunk blood vessel | 1.04e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.