FFCP PHASE1:Hg19::chr10:119806381..119806423,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22841 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29152 | |||
|TSSclassifier=S | |||
|UniProt=Q7L804,Q3I768 | |||
|association_with_transcript=-267bp_to_ENST00000355624,NM_014904,uc001ldj.1,uc009xyz.1_5end | |||
|description=CAGE_peak_1_at_RAB11FIP2_5end | |||
|id=chr10:119806381..119806423,- | |||
|ontology_enrichment_celltype=CL:0000738!1.39e-20!140;CL:0002087!2.29e-19!119;CL:0002031!2.94e-15!124;CL:0000037!1.71e-14!172;CL:0000566!1.71e-14!172;CL:0002032!2.82e-12!165;CL:0000837!2.82e-12!165;CL:0000766!1.48e-11!76;CL:0000988!2.11e-11!182;CL:0002057!3.44e-11!42;CL:0000860!5.15e-10!45;CL:0002194!1.10e-09!63;CL:0000576!1.10e-09!63;CL:0000040!1.10e-09!63;CL:0000559!1.10e-09!63;CL:0002009!2.40e-09!65;CL:0000542!8.90e-09!53;CL:0000051!8.90e-09!53;CL:0000838!1.31e-08!52;CL:0000557!1.59e-08!71;CL:0000839!8.24e-08!70;CL:0000791!3.51e-07!18;CL:0000789!3.51e-07!18;CL:0002420!3.51e-07!18;CL:0002419!3.51e-07!18;CL:0000790!3.51e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.24e-08;48!CL:0000860;6.38e-08;33!CL:0002057;6.38e-08;33!CL:0000791;3.30e-07;18!CL:0000789;3.30e-07;18!CL:0002419;3.30e-07;18!CL:0002087;7.91e-07;104 | |||
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|ontology_enrichment_development_v019=CL:0002057;3.16e-08;42!CL:0000790;3.30e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@RAB11FIP2 | |||
}} |
Revision as of 11:59, 10 September 2013
Short description: | p1@RAB11FIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RAB11FIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -267bp_to_ENST00000355624, NM_014904, uc001ldj.1, uc009xyz.1_5end |
EntrezGene: | RAB11FIP2 |
HGNC: | 29152 |
UniProt: | Q7L804Q3I768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.93e-22 | 136 |
nongranular leukocyte | 7.71e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 2.13e-16 | 120 |
hematopoietic stem cell | 2.02e-15 | 168 |
hematopoietic oligopotent progenitor cell | 4.00e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.00e-13 | 161 |
myeloid leukocyte | 7.16e-13 | 72 |
hematopoietic cell | 1.37e-12 | 177 |
classical monocyte | 3.37e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.37e-11 | 42 |
monopoietic cell | 4.55e-11 | 59 |
monocyte | 4.55e-11 | 59 |
monoblast | 4.55e-11 | 59 |
promonocyte | 4.55e-11 | 59 |
macrophage dendritic cell progenitor | 1.16e-10 | 61 |
defensive cell | 6.32e-10 | 48 |
phagocyte | 6.32e-10 | 48 |
granulocyte monocyte progenitor cell | 1.29e-09 | 67 |
myeloid lineage restricted progenitor cell | 7.76e-09 | 66 |
lymphocyte | 8.76e-09 | 53 |
common lymphoid progenitor | 8.76e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.29e-08 | 52 |
mature alpha-beta T cell | 3.46e-07 | 18 |
alpha-beta T cell | 3.46e-07 | 18 |
immature T cell | 3.46e-07 | 18 |
mature T cell | 3.46e-07 | 18 |
immature alpha-beta T cell | 3.46e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.28e-26 | 114 |
neural tube | 3.40e-13 | 56 |
neural rod | 3.40e-13 | 56 |
future spinal cord | 3.40e-13 | 56 |
neural keel | 3.40e-13 | 56 |
regional part of nervous system | 1.79e-12 | 53 |
regional part of brain | 1.79e-12 | 53 |
nervous system | 2.01e-12 | 89 |
central nervous system | 3.84e-12 | 81 |
regional part of forebrain | 6.10e-12 | 41 |
forebrain | 6.10e-12 | 41 |
anterior neural tube | 6.10e-12 | 41 |
future forebrain | 6.10e-12 | 41 |
brain | 2.16e-11 | 68 |
future brain | 2.16e-11 | 68 |
telencephalon | 3.68e-11 | 34 |
brain grey matter | 5.30e-11 | 34 |
gray matter | 5.30e-11 | 34 |
hematopoietic system | 9.11e-11 | 98 |
blood island | 9.11e-11 | 98 |
cerebral hemisphere | 2.05e-10 | 32 |
regional part of telencephalon | 2.08e-10 | 32 |
neural plate | 8.32e-09 | 82 |
presumptive neural plate | 8.32e-09 | 82 |
neurectoderm | 1.58e-08 | 86 |
hemolymphoid system | 2.12e-08 | 108 |
cerebral cortex | 5.84e-08 | 25 |
pallium | 5.84e-08 | 25 |
regional part of cerebral cortex | 1.15e-07 | 22 |
bone marrow | 2.13e-07 | 76 |
bone element | 2.62e-07 | 82 |
neocortex | 2.96e-07 | 20 |
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