FFCP PHASE1:Hg19::chr11:829560..829573,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283229|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28703|TSSclassifier=W|UniProt=|association_with_transcript=253bp_to_ENST00000528694_5end|coexpression_cluster_id=C108|description=CAGE_peak_13_at_EFCAB4A_5end|id=chr11:829560..829573,+|ontology_enrichment_celltype=CL:0000115!1.87e-13!35;CL:0002139!6.89e-13!24;CL:0002078!8.97e-11!44;CL:0000071!7.32e-10!18;CL:0002546!7.32e-10!18;CL:0000213!4.66e-09!57;CL:0000215!4.66e-09!57;CL:0002543!2.30e-07!6|ontology_enrichment_celltype_v019=CL:0002188;1.48e-18;5!CL:1000746;1.49e-13;7!CL:1000612;1.49e-13;7!CL:0000115;1.00e-12;36!CL:0002262;2.45e-12;2!CL:1000398;2.45e-12;2!CL:0002078;1.28e-10;45!CL:0000346;1.17e-08;3!CL:1000428;1.17e-08;3!CL:0002681;2.65e-08;12!CL:0002584;2.65e-08;12!CL:0000213;3.26e-07;58!CL:0000215;3.26e-07;58!CL:0002327;6.49e-07;4!CL:1000449;8.09e-07;15|ontology_enrichment_celltype_v019_2=CL:0002188,1.62e-18,5;CL:0000115,1.74e-15,36;CL:1000746,1.58e-13,7;CL:1000612,1.58e-13,7;CL:0002078,1.97e-12,45;CL:0002262,2.59e-12,2;CL:1000398,2.59e-12,2;CL:0000213,1.10e-09,58;CL:0000215,1.10e-09,58;CL:0000346,1.30e-08,3;CL:1000428,1.30e-08,3;CL:0002681,2.75e-08,12;CL:0002584,2.75e-08,12;CL:0002327,6.50e-07,4;CL:1000449,8.33e-07,15|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3493;2.45e-12;2!DOID:5093;6.49e-07;4!DOID:1612;6.49e-07;4|ontology_enrichment_disease_v019_2=DOID:3493,1.85e-12,2;DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4|ontology_enrichment_uberon=UBERON:0001986!7.32e-10!18;UBERON:0004638!7.32e-10!18;UBERON:0004852!7.32e-10!18;UBERON:0002049!2.73e-09!79;UBERON:0007798!2.73e-09!79;UBERON:0000055!5.85e-09!69;UBERON:0001638!1.26e-08!9;UBERON:0003920!1.26e-08!9;UBERON:0004582!1.26e-08!9;UBERON:0001737!3.82e-08!9;UBERON:0000477!1.42e-07!286;UBERON:0000487!1.45e-07!22|ontology_enrichment_uberon_v019=UBERON:0000353;7.18e-14;15!UBERON:0000074;1.49e-13;7!UBERON:0001229;1.49e-13;7!UBERON:0001281;2.45e-12;2!UBERON:0003497;2.45e-12;2!UBERON:0003909;2.45e-12;2!UBERON:0003835;2.45e-12;2!UBERON:0000412;1.17e-08;3!UBERON:0001992;1.17e-08;3!UBERON:0001280;1.17e-08;3!UBERON:0004647;1.17e-08;3!UBERON:0001225;2.65e-08;12!UBERON:0008987;2.65e-08;12!UBERON:0001911;6.49e-07;4!UBERON:0001851;8.09e-07;15!UBERON:0006555;8.09e-07;15!UBERON:0004819;8.09e-07;15!UBERON:0001285;8.09e-07;15!UBERON:0007684;8.09e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0000353,7.68e-14,15;UBERON:0010532,1.58e-13,7;UBERON:0000074,1.58e-13,7;UBERON:0001229,1.58e-13,7;UBERON:0001230,1.58e-13,7;UBERON:0003220,1.58e-13,7;UBERON:0005749,1.58e-13,7;UBERON:0004199,1.58e-13,7;UBERON:0004209,1.58e-13,7;UBERON:0004198,1.58e-13,7;UBERON:0001281,2.59e-12,2;UBERON:0003497,2.59e-12,2;UBERON:0003909,2.59e-12,2;UBERON:0003835,2.59e-12,2;UBERON:0005103,5.83e-12,8;UBERON:0000083,5.83e-12,8;UBERON:0009201,5.83e-12,8;UBERON:0006553,5.83e-12,8;UBERON:0003074,5.83e-12,8;UBERON:0003060,5.83e-12,8;UBERON:0000058,4.52e-11,19;UBERON:0000080,9.69e-11,9;UBERON:0002120,9.69e-11,9;UBERON:0004875,9.69e-11,9;UBERON:0005721,9.69e-11,9;UBERON:0005754,9.69e-11,9;UBERON:0007297,9.69e-11,9;UBERON:0004876,5.87e-09,11;UBERON:0001280,1.21e-08,3;UBERON:0004647,1.21e-08,3;UBERON:0005171,1.21e-08,3;UBERON:0000412,1.30e-08,3;UBERON:0001992,1.30e-08,3;UBERON:0001225,2.75e-08,12;UBERON:0008987,2.75e-08,12;UBERON:0003887,2.75e-08,12;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0001851,8.33e-07,15;UBERON:0004211,8.33e-07,15;UBERON:0009773,8.33e-07,15;UBERON:0001231,8.33e-07,15;UBERON:0001285,8.33e-07,15;UBERON:0007684,8.33e-07,15;UBERON:0004208,8.33e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,1.72046919021225,0,0,0.838998872419812,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0.976248230192678,0.367663080345869,0,0.803697554556718,0,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=253bp_to_ENST00000528694_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_13_at_EFCAB4A_5end | |||
|id=chr11:829560..829573,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.87e-13!35;CL:0002139!6.89e-13!24;CL:0002078!8.97e-11!44;CL:0000071!7.32e-10!18;CL:0002546!7.32e-10!18;CL:0000213!4.66e-09!57;CL:0000215!4.66e-09!57;CL:0002543!2.30e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002188;1.48e-18;5!CL:1000746;1.49e-13;7!CL:1000612;1.49e-13;7!CL:0000115;1.00e-12;36!CL:0002262;2.45e-12;2!CL:1000398;2.45e-12;2!CL:0002078;1.28e-10;45!CL:0000346;1.17e-08;3!CL:1000428;1.17e-08;3!CL:0002681;2.65e-08;12!CL:0002584;2.65e-08;12!CL:0000213;3.26e-07;58!CL:0000215;3.26e-07;58!CL:0002327;6.49e-07;4!CL:1000449;8.09e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.62e-18,5;CL:0000115,1.74e-15,36;CL:1000746,1.58e-13,7;CL:1000612,1.58e-13,7;CL:0002078,1.97e-12,45;CL:0002262,2.59e-12,2;CL:1000398,2.59e-12,2;CL:0000213,1.10e-09,58;CL:0000215,1.10e-09,58;CL:0000346,1.30e-08,3;CL:1000428,1.30e-08,3;CL:0002681,2.75e-08,12;CL:0002584,2.75e-08,12;CL:0002327,6.50e-07,4;CL:1000449,8.33e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.45e-12;2!DOID:5093;6.49e-07;4!DOID:1612;6.49e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.85e-12,2;DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.32e-10!18;UBERON:0004638!7.32e-10!18;UBERON:0004852!7.32e-10!18;UBERON:0002049!2.73e-09!79;UBERON:0007798!2.73e-09!79;UBERON:0000055!5.85e-09!69;UBERON:0001638!1.26e-08!9;UBERON:0003920!1.26e-08!9;UBERON:0004582!1.26e-08!9;UBERON:0001737!3.82e-08!9;UBERON:0000477!1.42e-07!286;UBERON:0000487!1.45e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;7.18e-14;15!UBERON:0000074;1.49e-13;7!UBERON:0001229;1.49e-13;7!UBERON:0001281;2.45e-12;2!UBERON:0003497;2.45e-12;2!UBERON:0003909;2.45e-12;2!UBERON:0003835;2.45e-12;2!UBERON:0000412;1.17e-08;3!UBERON:0001992;1.17e-08;3!UBERON:0001280;1.17e-08;3!UBERON:0004647;1.17e-08;3!UBERON:0001225;2.65e-08;12!UBERON:0008987;2.65e-08;12!UBERON:0001911;6.49e-07;4!UBERON:0001851;8.09e-07;15!UBERON:0006555;8.09e-07;15!UBERON:0004819;8.09e-07;15!UBERON:0001285;8.09e-07;15!UBERON:0007684;8.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000353,7.68e-14,15;UBERON:0010532,1.58e-13,7;UBERON:0000074,1.58e-13,7;UBERON:0001229,1.58e-13,7;UBERON:0001230,1.58e-13,7;UBERON:0003220,1.58e-13,7;UBERON:0005749,1.58e-13,7;UBERON:0004199,1.58e-13,7;UBERON:0004209,1.58e-13,7;UBERON:0004198,1.58e-13,7;UBERON:0001281,2.59e-12,2;UBERON:0003497,2.59e-12,2;UBERON:0003909,2.59e-12,2;UBERON:0003835,2.59e-12,2;UBERON:0005103,5.83e-12,8;UBERON:0000083,5.83e-12,8;UBERON:0009201,5.83e-12,8;UBERON:0006553,5.83e-12,8;UBERON:0003074,5.83e-12,8;UBERON:0003060,5.83e-12,8;UBERON:0000058,4.52e-11,19;UBERON:0000080,9.69e-11,9;UBERON:0002120,9.69e-11,9;UBERON:0004875,9.69e-11,9;UBERON:0005721,9.69e-11,9;UBERON:0005754,9.69e-11,9;UBERON:0007297,9.69e-11,9;UBERON:0004876,5.87e-09,11;UBERON:0001280,1.21e-08,3;UBERON:0004647,1.21e-08,3;UBERON:0005171,1.21e-08,3;UBERON:0000412,1.30e-08,3;UBERON:0001992,1.30e-08,3;UBERON:0001225,2.75e-08,12;UBERON:0008987,2.75e-08,12;UBERON:0003887,2.75e-08,12;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0001851,8.33e-07,15;UBERON:0004211,8.33e-07,15;UBERON:0009773,8.33e-07,15;UBERON:0001231,8.33e-07,15;UBERON:0001285,8.33e-07,15;UBERON:0007684,8.33e-07,15;UBERON:0004208,8.33e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,1.72046919021225,0,0,0.838998872419812,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0.976248230192678,0.367663080345869,0,0.803697554556718,0,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0.196221465125346,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,6.99679999969566,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,1.12198039399954,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0,0,0,0,0.675769762612291,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0.431855182437243,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,1.70685094975177,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0.684466602170562,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0.402547587182052,0 | |||
|short_description=p13@EFCAB4A | |||
}} |
Revision as of 19:56, 10 September 2013
Short description: | p13@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 253bp_to_ENST00000528694_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.62e-18 | 5 |
endothelial cell | 1.74e-15 | 36 |
glomerular cell | 1.58e-13 | 7 |
kidney corpuscule cell | 1.58e-13 | 7 |
meso-epithelial cell | 1.97e-12 | 45 |
endothelial cell of sinusoid | 2.59e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.59e-12 | 2 |
lining cell | 1.10e-09 | 58 |
barrier cell | 1.10e-09 | 58 |
hair follicle dermal papilla cell | 1.30e-08 | 3 |
stem cell of epidermis | 1.30e-08 | 3 |
kidney cortical cell | 2.75e-08 | 12 |
renal cortical epithelial cell | 2.75e-08 | 12 |
mammary gland epithelial cell | 6.50e-07 | 4 |
epithelial cell of nephron | 8.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.85e-12 | 2 |
thoracic cancer | 6.50e-07 | 4 |
breast cancer | 6.50e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.