FFCP PHASE1:Hg19::chr11:842826..842881,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7106 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11859 | |||
|TSSclassifier=S | |||
|UniProt=A8MVV6,O14817 | |||
|association_with_transcript=2bp_to_ENST00000397396,NM_001025238,NM_001025239,NM_003271,uc001lsd.1,uc001lse.1,uc001lsf.1_5end | |||
|coexpression_cluster_id=C3206 | |||
|description=CAGE_peak_1_at_TSPAN4_5end | |||
|id=chr11:842826..842881,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.20e-34!180;CL:0000222!4.56e-21!119;CL:0000548!2.65e-18!679;CL:0000004!2.65e-18!679;CL:0000255!2.65e-18!679;CL:0000057!6.49e-18!75;CL:0000012!1.33e-17!682;CL:0002371!1.56e-16!591;CL:0000144!1.09e-15!625;CL:0000220!1.27e-15!246;CL:0002321!4.10e-15!248;CL:0000183!5.48e-14!59;CL:0000680!1.02e-13!57;CL:0000056!1.02e-13!57;CL:0000355!1.02e-13!57;CL:0000187!1.55e-12!54;CL:0000192!1.39e-11!42;CL:0000514!1.39e-11!42;CL:0000393!4.88e-10!60;CL:0000211!4.88e-10!60;CL:0000359!1.27e-09!32;CL:0002620!2.17e-07!23;CL:0000048!2.26e-07!430;CL:0000213!2.85e-07!57;CL:0000215!2.85e-07!57;CL:0000723!4.71e-07!436;CL:0000003!6.92e-07!722 | |||
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|ontology_enrichment_development_v019=CL:0000514;5.00e-09;43!CL:0000355;7.27e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@TSPAN4 | |||
}} |
Revision as of 19:59, 10 September 2013
Short description: | p1@TSPAN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TSPAN4_5end |
Coexpression cluster: | C3206_Mesenchymal_Osteoblast_tenocyte_Synoviocyte_Alveolar_Fibroblast_Smooth |
Association with transcript: | 2bp_to_ENST00000397396, NM_001025238, NM_001025239, NM_003271, uc001lsd.1, uc001lse.1, uc001lsf.1_5end |
EntrezGene: | TSPAN4 |
HGNC: | 11859 |
UniProt: | A8MVV6O14817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.07e-22 | 121 |
fibroblast | 4.93e-18 | 76 |
embryonic cell | 1.13e-15 | 250 |
muscle precursor cell | 3.42e-14 | 58 |
myoblast | 3.42e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.42e-14 | 58 |
muscle cell | 5.29e-13 | 55 |
smooth muscle cell | 4.60e-12 | 43 |
smooth muscle myoblast | 4.60e-12 | 43 |
electrically responsive cell | 1.85e-10 | 61 |
electrically active cell | 1.85e-10 | 61 |
vascular associated smooth muscle cell | 1.27e-09 | 32 |
lining cell | 1.86e-07 | 58 |
barrier cell | 1.86e-07 | 58 |
multi fate stem cell | 2.03e-07 | 427 |
skin fibroblast | 2.17e-07 | 23 |
somatic stem cell | 4.26e-07 | 433 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.