FFCP PHASE1:Hg19::chr11:2160337..2160349,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=322bp_to_BC017277_5end|coexpression_cluster_id=C172|description=CAGE_peak_13_at_BC017277_5end|id=chr11:2160337..2160349,+|ontology_enrichment_celltype=CL:0000244!1.29e-07!4;CL:0000731!1.29e-07!4|ontology_enrichment_celltype_v019=CL:0000349;8.33e-27;19!CL:0002577;6.13e-14;3!CL:0002575;3.83e-10;2!CL:0002536;5.25e-10;2!CL:0000244;5.69e-10;4!CL:0000731;5.69e-10;4!CL:0002537;6.02e-09;5!CL:0002541;2.75e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,7.85e-27,19;CL:0002577,5.62e-14,3;CL:0002575,3.35e-10,2;CL:0002536,5.26e-10,2;CL:0000244,6.89e-10,4;CL:0000731,6.89e-10,4;CL:0002537,5.86e-09,5;CL:0002541,2.59e-07,3|ontology_enrichment_development_v019=UBERON:0004161;4.10e-10;11!UBERON:0009497;1.65e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.30e-18!14;UBERON:0000158!2.30e-18!14;UBERON:0003124!2.07e-13!7;UBERON:0000478!4.96e-13!24;UBERON:0001987!2.15e-08!4;UBERON:0004340!2.15e-08!4;UBERON:0000305!3.71e-07!7|ontology_enrichment_uberon_v019=UBERON:0000478;2.40e-29;24!UBERON:0005631;7.16e-22;10!UBERON:0000158;7.16e-22;10!UBERON:0001987;3.48e-18;4!UBERON:0000305;2.87e-16;7!UBERON:0000365;4.54e-08;5!UBERON:0003124;2.75e-07;3!UBERON:0000920;2.75e-07;3!UBERON:0000922;5.01e-07;49!UBERON:0005910;8.51e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.09e-37,14;UBERON:0000158,2.09e-37,14;UBERON:0000478,2.24e-29,24;UBERON:0003124,4.31e-23,7;UBERON:0001987,3.19e-18,4;UBERON:0004340,3.19e-18,4;UBERON:0000305,2.78e-16,7;UBERON:0004871,3.27e-14,8;UBERON:0000365,5.28e-08,5;UBERON:0004923,2.09e-07,66;UBERON:0000920,2.59e-07,3;UBERON:0005910,9.64e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.58726881473362,3.69273769519835,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,1.41849132023278,0,0,3.25572963234866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,3.91602314925481,7.54915532383883,0,0,0,1.81876542867756,3.32870879020994,7.25736703991233,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.564862804660675,1.29151611801369,1.68471475667626,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4597352674091,3.8605408508243,14.1293922965647,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0,1.84451123510448,0,0,7.97502899329799,0.732780747214898,21.854425816764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,15.248975298677,0,0,0,0,0,3.62972148145992,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0,0,0.0801588202515337,0,0,0,0,5.8342299273068,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,1.81395375714161,0,0,4.88455730304787,4.28562463582066,4.85305515750131,1.47641222272123,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.891727998294968,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0.146552233678082,22.5261711150776,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58824932024625,0,0,0,0,0,0,0,0,1.9619051431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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=322bp_to_BC017277_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_13_at_BC017277_5end | |||
|id=chr11:2160337..2160349,+ | |||
|ontology_enrichment_celltype=CL:0000244!1.29e-07!4;CL:0000731!1.29e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.33e-27;19!CL:0002577;6.13e-14;3!CL:0002575;3.83e-10;2!CL:0002536;5.25e-10;2!CL:0000244;5.69e-10;4!CL:0000731;5.69e-10;4!CL:0002537;6.02e-09;5!CL:0002541;2.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.85e-27,19;CL:0002577,5.62e-14,3;CL:0002575,3.35e-10,2;CL:0002536,5.26e-10,2;CL:0000244,6.89e-10,4;CL:0000731,6.89e-10,4;CL:0002537,5.86e-09,5;CL:0002541,2.59e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.10e-10;11!UBERON:0009497;1.65e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.30e-18!14;UBERON:0000158!2.30e-18!14;UBERON:0003124!2.07e-13!7;UBERON:0000478!4.96e-13!24;UBERON:0001987!2.15e-08!4;UBERON:0004340!2.15e-08!4;UBERON:0000305!3.71e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.40e-29;24!UBERON:0005631;7.16e-22;10!UBERON:0000158;7.16e-22;10!UBERON:0001987;3.48e-18;4!UBERON:0000305;2.87e-16;7!UBERON:0000365;4.54e-08;5!UBERON:0003124;2.75e-07;3!UBERON:0000920;2.75e-07;3!UBERON:0000922;5.01e-07;49!UBERON:0005910;8.51e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.09e-37,14;UBERON:0000158,2.09e-37,14;UBERON:0000478,2.24e-29,24;UBERON:0003124,4.31e-23,7;UBERON:0001987,3.19e-18,4;UBERON:0004340,3.19e-18,4;UBERON:0000305,2.78e-16,7;UBERON:0004871,3.27e-14,8;UBERON:0000365,5.28e-08,5;UBERON:0004923,2.09e-07,66;UBERON:0000920,2.59e-07,3;UBERON:0005910,9.64e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,4.58726881473362,3.69273769519835,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,1.41849132023278,0,0,3.25572963234866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,3.91602314925481,7.54915532383883,0,0,0,1.81876542867756,3.32870879020994,7.25736703991233,0,0,0,0,0,0,0,0,0,0,0,0,2.65890789101569,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.564862804660675,1.29151611801369,1.68471475667626,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4597352674091,3.8605408508243,14.1293922965647,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.307801034015188,0,1.84451123510448,0,0,7.97502899329799,0.732780747214898,21.854425816764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,15.248975298677,0,0,0,0,0,3.62972148145992,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,1.58186518546373,0,0,0,0,0.0801588202515337,0,0,0,0,5.8342299273068,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,1.81395375714161,0,0,4.88455730304787,4.28562463582066,4.85305515750131,1.47641222272123,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.891727998294968,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0.146552233678082,22.5261711150776,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0.795664888465099,0.300841313397029,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58824932024625,0,0,0,0,0,0,0,0,1.96190514319652,0.913158720509496,0,0,0.357382720883282,0,0,5.0418898967748,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0.365753774946808,0,0.205325613712494,16.2374020387348,0,0,2.58636007709779,0,0,0,0,0,0.655678681511872,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0.386747327841463,0,0,0,0,2.92134555298607,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,7.14193294391221,0,0.31037357147929,0,0,1.21270313374932,0,21.5606979683727,0,0,2.66128285236811,0,0,0,0.0898252021065869,11.7320471201727,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p13@BC017277 | |||
}} |
Revision as of 17:13, 10 September 2013
Short description: | p13@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 322bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.85e-27 | 19 |
placental epithelial cell | 5.62e-14 | 3 |
central nervous system pericyte | 3.35e-10 | 2 |
amniotic epithelial cell | 5.26e-10 | 2 |
transitional epithelial cell | 6.89e-10 | 4 |
urothelial cell | 6.89e-10 | 4 |
amnion mesenchymal stem cell | 5.86e-09 | 5 |
chorionic membrane mesenchymal stem cell | 2.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.09e-37 | 14 |
membranous layer | 2.09e-37 | 14 |
extraembryonic structure | 2.24e-29 | 24 |
chorion | 4.31e-23 | 7 |
placenta | 3.19e-18 | 4 |
allantois | 3.19e-18 | 4 |
amnion | 2.78e-16 | 7 |
somatic layer of lateral plate mesoderm | 3.27e-14 | 8 |
urothelium | 5.28e-08 | 5 |
organ component layer | 2.09e-07 | 66 |
egg chorion | 2.59e-07 | 3 |
transitional epithelium | 9.64e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.